Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq259 315 5e-80
seq557 150 1e-30
seq654 141 7e-28
seq362 138 8e-27
seq1181 132 4e-25
seq1127 132 4e-25
seq291 120 2e-21
seq180 116 3e-20
seq10070 102 6e-16
seq22 100 2e-15
seq74 95.1 9e-14
seq324 91.5 1e-12
>seq259
Length=2316233
Score = 315 bits (348), Expect = 5e-80
Identities = 961/1466 (66%), Gaps = 22/1466 (2%)
Strand=Plus/Minus
Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484
||| || ||||||||||| ||||||||||| | ||||| || || ||||| ||||| ||
Sbjct 1744348 GGCTGTGACATTAAGAATTCCATTGGCATCAATGTCAAAGGTCACCTCAATCTGAGGAAC 1744289
Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544
|| || | ||||| || || || || | ||| ||||| || || ||
Sbjct 1744288 TCCCCTGGGTGCAGGAGGTATTCCAGTCAGGTCAAAGCGCCCCAGTAGGTTGTTGTCACG 1744229
Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604
|| | ||||||||||| | | ||||| || ||| ||| |||||||||||
Sbjct 1744228 TGTCATAGCCCGTTCACCCTCATATACCTGGATCAGCACCCCAGGTTGGTTATCTGAATA 1744169
Query 281605 AGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 281663
|| || || | |||| | | ||| || || || | || | | ||| | |
Sbjct 1744168 TGTGGTGAAGA-TCTGTGTCTGCTTAGTGGGGATGGTGGAATTACGCTTAATCAGCACAG 1744110
Query 281664 TCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 281723
|||| | || |||||||| ||||| || ||||| ||||| | || || | | | |
Sbjct 1744109 TCATCACGCCCCCAGCTGTCTCTAACCCTAGAGACAGAGGGGCCACGTCCAACAAAAGCA 1744050
Query 281724 TATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 281783
|| || | |||||| | | ||| | | ||| ||||| || | ||||| ||||
Sbjct 1744049 GATCCTGTACCTTTTCAGATTTGTCACCCATCAAAATGGCTGCCTGTACTGCAGCCCCAT 1743990
Query 281784 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG 281843
| || || || ||||||||||| | | | || || | ||||| ||| | |
Sbjct 1743989 AGGCTACTGCCTCATCAGGATTGATGCTCTTGTTGAGATCACGTCCATTAAAATAGTCCT 1743930
Query 281844 AAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902
||| |||| ||| |||||||| || |||| || || || ||||| ||||| |||||
Sbjct 1743929 GAAGCAGTT-TCTGCACCTTAGGGATGCGAGTGGAGCCCCCGACTAAAACAATGTCATGG 1743871
Query 281903 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT 281962
| | | ||||||| || | ||| | | ||||||| || ||||| || | |
Sbjct 1743870 ATTTTAGCCTTATCCATCTTGGCATCTCGAAGAGCTTTTTCCACAGGTTCCAGGGTACCC 1743811
Query 281963 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-T 282020
||||||| ||||| ||| || ||||| || ||||| || | || | | || || |
Sbjct 1743810 CTAAACAGGTCTGCACACAGCTCTTCAAACCGGGCTCTGGTGATAG--ATGTGTAGAAGT 1743753
Query 282021 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 282080
|||| ||||| | | ||||||| ||| | | | ||| || || || || | |
Sbjct 1743752 CAATGCCTTCATAAAGTGAATCAATTTCCAGATTGGCTTGGGTGCTGGATGACAGGGTCC 1743693
Query 282081 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT--TTG--CTGATTGATTC 282136
|| || || || || || || | | | | | |||| ||| ||| ||||
Sbjct 1743692 TCTTGGCTCGCTCGCAAGCGGTACGCAAACGCCTCACGGCTCGCTTGTTCTGGCTGATG- 1743634
Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 282196
||| | || | ||| || ||||| || || ||| | | ||||| | || ||
Sbjct 1743633 ---TCTTTCTTGTGTTTCCTTTTGAACTCCTCTACAAAGTGGTTCACAAGCCTGTTGTCG 1743577
Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256
|| || || || || | | || | || | ||||| |||||| |||| |||||
Sbjct 1743576 AAGTCCTCTCCACCTAGGTGGGTGTCCCCAGCTGTAGCCTTTACTTCAAAAATCCCATCA 1743517
Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT-T 282315
|| | | || | | |||||| || || ||||||| |||||| || ||||||| |
Sbjct 1743516 TCTATGGTCAGGATGGATACATCAAATGTGCCTCCACCCAAATCAAAGATGAGTACATGT 1743457
Query 282316 CATT-TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374
| | || || | || || | | ||| |||||||||| |||||||| || |||||||
Sbjct 1743456 CGCTCTCCCTGACCTGCCTTATCT-AAG-CCATACGCAATGGCAGCAGCTGTGGGTTCAT 1743399
Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434
| || ||||| | ||||| || || ||||| |||||||| || ||||| || | ||
Sbjct 1743398 TGATGATTCTTAGCACATTGAGTCCTGCAATCACACCTGCATCCTTGGTGGCCTGGCGTT 1743339
Query 282435 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATAT 282494
| || || || ||||| || || ||||| || || |||| || | | || | |
Sbjct 1743338 GAGAGTCATTGAAATAGGCCGGTACAGTGATCACAGCATTGGTGATCAGGTGGCCTAAAA 1743279
Query 282495 AAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAAT 282554
|||| ||| |||| ||||| ||| | || | |||||| ||||||| ||| || | |
Sbjct 1743278 AAGCCTCTGCAGTTTCCTTCATCTTAGTCAATACCATTGAAGAAATTTCTTCAGG-GTAG 1743220
Query 282555 ATTGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 282613
| |||| | || || ||| || || | | || || || |||| ||
Sbjct 1743219 AAAGCTTTTTTCTCCCCTTTATAGGACACCAGCACCTTGGGCTTGCCTCCTTCATTGATC 1743160
Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 282673
|||| ||| |||||| |||||||||||| || ||| | |||||||| | || |||
Sbjct 1743159 ACTTGAAAAGGCCAAAGTTTCATATCTGACTGCACAACAGGATCATTAAATTTCCTGCCA 1743100
Query 282674 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCT 282733
|| | ||||| |||||||| | ||| || ||||| | || | || | |||||||
Sbjct 1743099 ATCAGACGTTTGGCATCAAAGACAGTGTTCTGAGGATTCATGGCTACCTGGTTTTTGGCT 1743040
Query 282734 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 282793
||||| ||||| || ||||||| || || || | ||||| || || ||||| ||
Sbjct 1743039 GCATCCCCAATAAGCCGTTCTGTATCCGTGAAGGCCACATAGCTGGGGGTGGTGCGGTTG 1742980
Query 282794 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 282853
|| || ||||| ||||| || || || || |||| || | || ||||||||| | |
Sbjct 1742979 CCCTGGTCATTGGCAATGATCTCCACCTTGCCATGCTGGAACACCCCTACACAAGAATAG 1742920
Query 282854 GTTGTTCCTAAATCAATACCAATAGC 282879
|| || || || || || || || ||
Sbjct 1742919 GTGGTACCCAAGTCGATGCCTATGGC 1742894
>seq557
Length=306283
Score = 150 bits (166), Expect = 1e-30
Identities = 196/268 (73%), Gaps = 5/268 (2%)
Strand=Plus/Minus
Query 282285 TTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGAC 282344
|||||||||||| |||||| || || | ||| | ||| | | | ||||| || |
Sbjct 61428 TTCCACCACCCAGATCAAACATCAGGATGTTCTTCTCT---CCCTCCCTCTTATCCAGGC 61372
Query 282345 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 282404
|||| |||| |||||| || || || ||||| || || |||| |||||| || |||||||
Sbjct 61371 CATAAGCAATAGCAGCTGCTGTAGGCTCATTGATTATCCTCATAACATTCAGGCCAGCAA 61312
Query 282405 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464
| |||| |||||||| || | ||| || | ||| |||||| | || || |||||||
Sbjct 61311 TAGTTCCAGCATCTTTGGTTGGTTGCTGCTGGGCATCATTAAAACAGGCCGGTACAGTAA 61252
Query 282465 TAACGGCATCTGTTA-CTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523
||| |||| || | ||||||| |||| |||||| || || | |||||||||| |
Sbjct 61251 CAACTGCATGGGTAACCTTCTTTCCCAA-ATAAGCCTCAGCAGTCTCTTTCATTTTAGTG 61193
Query 282524 AAAATCATTGATGAAATTTGTTCTGGAG 282551
| ||| || | || |||| ||||||||
Sbjct 61192 AGAATAATAGCAGAGATTTCTTCTGGAG 61165
>seq654
Length=198565
Score = 141 bits (156), Expect = 7e-28
Identities = 217/302 (72%), Gaps = 8/302 (3%)
Strand=Plus/Plus
Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316
|||| || | ||||| |||| |||||||||||||| |||||| | || | |||
Sbjct 161335 TCAATGGAGAGAAGAGACACATAGAAGGTTCCACCACCCAGATCAAACACCAGGATGTTC 161394
Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376
|||||| || | | |||| || | ||| ||| |||||| || || || |||||
Sbjct 161395 --TTCTTT-TCCTCCCTCTTATTCAGGCAATAAGCATTAGCAGCTGCTGTAGGCTCATTG 161451
Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436
|| || |||| |||||| || |||||||| |||| |||||||| || ||||| | ||
Sbjct 161452 ATGATCCTCATAACATTCAGGCCAGCAATATTTCCAGCATCTTTGGTTGCTTGCCACTG- 161510
Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496
| ||| |||| ||| | || |||||| ||| |||| || || | | |||| | ||||
Sbjct 161511 GCATCATTAATATAGACTGGTTCAGTAACAACTGCAT-GGTAACCT-TCTTCCCAAATAA 161568
Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG--AAT 282554
|| || || | |||||||||| | |||||||| | || |||| |||||||| |||
Sbjct 161569 GCCTCAGCAGTCTCTTTCATTTTAGTGAAAATCATAGCAGAGATTTCTTCTGGAGCAAAT 161628
Query 282555 AT 282556
||
Sbjct 161629 AT 161630
>seq362
Length=1080710
Score = 138 bits (152), Expect = 8e-27
Identities = 195/269 (72%), Gaps = 5/269 (2%)
Strand=Plus/Minus
Query 282283 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 282342
||||||||||| || |||||| || || | ||| |||||| || | || |||| ||
Sbjct 904211 GGTTCCACCACTCAGATCAAACATCAGAATGTTC--TTCTTT-TCCTCCTTCTTATACAG 904155
Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402
| ||| |||| |||||| || || || ||||| || || |||| |||||| || |||||
Sbjct 904154 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATCCTCATAACATTCAGGCCAGC 904095
Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462
||| |||| |||||||| || ||||| | || | ||| |||||||| | || ||||
Sbjct 904094 AATAGTTCCAGCATCTTTGGTTGCTTGCCACTG-GCATCATTAAAATAGACTGGTTCAGT 904036
Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACT 282522
| || |||| || || | | ||| | |||||| | || | |||||||||| |
Sbjct 904035 GACAATTGCATGGGTAACCT-TCTTCACAAATAAGCCTCCACAGTCTCTTTCATTTTAGT 903977
Query 282523 TAAAATCATTGATGAAATTTGTTCTGGAG 282551
| |||||| | ||||||| ||||||||
Sbjct 903976 GAGAATCATAGCAGAAATTTCTTCTGGAG 903948
>seq1181
Length=43409
Score = 132 bits (146), Expect = 4e-25
Identities = 194/269 (72%), Gaps = 14/269 (5%)
Strand=Plus/Minus
Query 282283 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 282342
|||||||||||||| |||||| | || || ||| |||||| || | | ||||| ||
Sbjct 13318 GGTTCCACCACCCAGATCAAACACCAGGACGTTC--TTCTTT-TCCTCCCTCTTATCCAG 13262
Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402
| ||| |||| |||||| || || || ||||| || || |||| |||||| || | |||
Sbjct 13261 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATCCTCATAACATTCAGGCTAGC 13202
Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462
||| |||| |||||||| || |||| | || | ||| |||||||| | || ||||
Sbjct 13201 AATAGTTCCAGCATCTTTGGTTGCTTCCCACTG-GCATCATTAAAATACACTGGTTCAGT 13143
Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACT 282522
|| ||| |||| || || | | |||| | |||||| ||| ||||||||| |
Sbjct 13142 AACAACTGCATGGGTAACCT-TCTTCCCAAATAAGC-CTT--------TTTCATTTTGGT 13093
Query 282523 TAAAATCATTGATGAAATTTGTTCTGGAG 282551
||||| || | || |||| ||||||||
Sbjct 13092 GAAAATTATAGCAGAGATTTCTTCTGGAG 13064
>seq1127
Length=50553
Score = 132 bits (146), Expect = 4e-25
Identities = 246/359 (69%), Gaps = 4/359 (1%)
Strand=Plus/Plus
Query 282195 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 282254
|||| ||||| || ||| | ||||| || ||||| | |||||||| | ||
Sbjct 9864 CAAAGTCTTCTCCACCCCGATGAGTATCTCTATTGGTAGCAATGACTTGGAAGACATCAA 9923
Query 282255 CTT--CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312
|| ||| | | ||||| |||| | |||||||||||| |||||| | || |
Sbjct 9924 ATTGTCAATGGGGAGAAGAGACACATAGAAGTTTCCACCACCCAGATCAAACACCAGGAT 9983
Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372
||| |||| | ||| | | | || || | ||| |||| |||||| | || || ||
Sbjct 9984 GTTC--TTCTCTCCCTTCCTCTATCTCCAGGCAATAAGCAATAGCAGCTTCTGTAGGCTC 10041
Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432
||| || || || | |||||| || |||||||| |||| |||||||| || |||||
Sbjct 10042 ATTGATGATCCTGATAACATTCAGGCCAGCAATAGTTCCAGCATCTTTGGTTGCTTGCTG 10101
Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492
|| | ||| |||||| | || || ||||||| ||| |||| || || | |||||||
Sbjct 10102 CTGGGCATCATTAAAACAGGCTGGTACAGTAACAACTGCATGGGTAACCTTCTTTCCAAA 10161
Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551
|||||| | || | ||||||| || | | ||| || | || |||| ||||||||
Sbjct 10162 ATAAGCCTCAGAAGTCTCTTTCATTATAGTGAGAATAATAGCGGAGATTTCTTCTGGAG 10220
>seq291
Length=1898989
Score = 120 bits (132), Expect = 2e-21
Identities = 159/218 (73%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394
||| | |||| ||| ||| |||||| || || || ||| |||| || |||| |||||
Sbjct 880865 TTAACCAGACGATAAGCAGTAGCAGCTGCTGTAGGCTCAGTAATGATCCTCATTACATTC 880924
Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454
|| |||||||| |||| | |||||| | | || | || | ||| |||||||||||
Sbjct 880925 AGGCCAGCAATAGTTCCAGAATCTTTGCTTGACTGCCACTGGGCATCTTTAAAATATGCC 880984
Query 282455 GGAACAGTAATAACGGCATCTGTTA-CTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTT 282513
| ||||||| ||| |||| || | ||||||| |||| ||||| | || || | |||
Sbjct 880985 GTTACAGTAACAACTGCATAGGTAATCTTCTTTCCCAA-ATAAGTGTGAGCAGTATCTTT 881043
Query 282514 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551
|||||| | | ||| || | ||||||| ||||||||
Sbjct 881044 TATTTTAGTGAGAATTATAGCAGAAATTTATTCTGGAG 881081
>seq180
Length=4215775
Score = 116 bits (128), Expect = 3e-20
Identities = 486/757 (64%), Gaps = 30/757 (4%)
Strand=Plus/Plus
Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 281731
||||||| ||||| | |||||| ||||||||||||||||| | || | | || ||||
Sbjct 3460186 CCACCAGAAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAAGAGCAGCAAATCTTGA 3460245
Query 281732 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 281791
| |||| | | || || | ||| ||| | || | ||| |||||||| ||||||
Sbjct 3460246 ACATTTTTA-GGCTATGTTCAGATAAAATGGCTACCTGGACAGCTGCACCATAAGCAACA 3460304
Query 281792 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 281851
|| |||||||| || | | | ||||| || ||| ||||||| || | | |||||
Sbjct 3460305 GCATCATCAGGGTTGATACTCTCATTCCATTCTTTTCCATTGATGAAGTCCTACAGAAGC 3460364
Query 281852 TGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 281910
| ||| | || || ||| ||| || || || || | |||||| ||||| | ||| |
Sbjct 3460365 T-TCTGAATCTGGGGGATATGAGTAGAACCACCCACCAGTACAATATCATGGATATGTAA 3460423
Query 281911 -TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACA 281969
||| || | || | || | | | |||||| || || ||||| | | ||||
Sbjct 3460424 CTTTGTCTAACTTGGCATTTCAAAGAGATTTTTCTACAGGATCAAGGGTGCCACGGAACA 3460483
Query 281970 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 282029
| | ||| ||||| ||| ||| | |||| | | || | | |||||||
Sbjct 3460484 GGATTCAAC-----TCTTCAAATCAAGCACAGGTAATGGAGGTATAGAAGTTGATTCCTT 3460538
Query 282030 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 282089
| | | |||||||| ||| | ||| || | ||||| || | | | ||||| |
Sbjct 3460539 CATAGAGAGAATCAATCTCAGTACTAGCCTGTTTGCTGGAAGAGAGGGTATGCTTAGCTC 3460598
Query 282090 GTTCACATGCTGTCCTTAGTC-TTCGTAAG-GCTTTTGCTGATTGATTCAAATCTGTTTT 282147
||||||||| || || | || | || |||||| | || | | || | ||
Sbjct 3460599 TTTCACATGCAGTATGGAGACGTTGGACAGCTCTTTTGTT--TTCACGGATGTCCTTCTT 3460656
Query 282148 ATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCAAAATCTTCAC 282206
|| |||| |||||| || | | | | || || | ||| |||||||||||||| |
Sbjct 3460657 ATGCTTTCCCTTGAACTCAGAGATAAAAAACATTGACCACACGGTTATCAAAATCTTCTC 3460716
Query 282207 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 282266
| ||||| | || | ||| |||| | || || | ||| || |
Sbjct 3460717 CACCCAAGTGGGTGTCTCC------AGCTGTGGATTTGA---------CCTCAGTAGTGA 3460761
Query 282267 AAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT 282326
| | | |||||| || |||| || | || |||||| || ||||| ||||
Sbjct 3460762 AGATTGACACATCAAAAGTGCCACTTCCTAAAT-AAAAATCAGCACATTTCTTTCAGCTC 3460820
Query 282327 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 282386
| ||||| || | | |||| |||| | ||| |||||||| | ||| || || || |
Sbjct 3460821 CAACCTTTTTGTCTAAATCATAAGCAATAACAGTGGCAGTTGGCTAATTGATTATCCTAA 3460880
Query 282387 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 282423
||||| |||||||||||| |||| || ||||| ||
Sbjct 3460881 GTACATTGAGACCAGCAATTATTCCGGCGTCTTTGGT 3460917
>seq10070
Length=1232
Score = 102 bits (112), Expect = 6e-16
Identities = 155/216 (72%), Gaps = 5/216 (2%)
Strand=Plus/Minus
Query 282283 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 282342
||||||||||| || |||||| | || | ||| |||||| || | ||||| ||
Sbjct 1129 GGTTCCACCACTCAGATCAAACACCAGGATGTTC--TTCTTT-TCCTCCGGCTTATCCAG 1073
Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402
| ||| |||| |||||| || || || ||||| || ||||||| |||||| || |||||
Sbjct 1072 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATTCTCATAACATTCAGGCCAGC 1013
Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462
||| |||| |||||||| || |||| || | ||| |||||||| || ||||
Sbjct 1012 AATAGTTCCAGCATCTTTGGTTGCTTCCAACTG-GCATCATTAAAATAGATTGGTTCAGT 954
Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGC 282498
|| ||| || | || || | | |||| | ||||||
Sbjct 953 AACAACTGCGTGGGTAACCT-TCTTCCCAAATAAGC 919
>seq22
Length=17878332
Score = 100 bits (110), Expect = 2e-15
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356
||||| || || |||| |||||||||||||| ||||| || ||| | || |||||| |
Sbjct 15457669 TGTACACTTATCCTGACTGAGGGAGATTCAGCCAAAACTTTGGCTGTTTCAGGCCTTGGT 15457610
Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416
||| | || ||||| | ||||| |||||||| |||||||||||| | | ||||| |
Sbjct 15457609 GTTGTAGGGAGAGACAAGTATGGTGTTTTCCCTCTTAGAGGAAAAATACTCAATGTCCGA 15457550
Query 400417 GATGCTAGTCCTAAA 400431
|| ||| || ||||
Sbjct 15457549 GAAGCTTCTCATAAA 15457535
>seq74
Length=8649107
Score = 95.1 bits (104), Expect = 9e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|| || || | ||| || |||| ||||||||||||||| ||||| || || || | |||
Sbjct 7579693 TTCTTGTCCAAACCGTAAGCAATAGCAGCAGCAGTTGGCTCATTGATTATCCTAAGTACA 7579752
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| ||||||||||| |||| |||||||| || || || | || ||||| || || ||
Sbjct 7579753 TTGAGACCAGCAATGGTTCCGGCATCTTTGGTTGCCTGACGCTGAGAATCATTGAAGTAA 7579812
Query 282452 GCAGGAACAGTAATAACGGCAT 282473
|| || || || | || ||||
Sbjct 7579813 GCTGGCACTGTGACCACAGCAT 7579834
>seq324
Length=1494514
Score = 91.5 bits (100), Expect = 1e-12
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 131183 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAC 131242
|| || ||||| ||||| ||||| ||||||||| | || || | || ||||||||
Sbjct 949248 GCTACTATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAGAGTCATTCATTAT 949307
Query 131243 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 131302
|| ||||| || | || ||| |||||||| |||||||||||||| || |||||||||
Sbjct 949308 GGTGCTCCTAAAGAAATGGAATCATATTATCAGGAAATTGGTAGAGCTGGCCGTGATGGA 949367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740017537453158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |