Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq259 315 5e-80 seq557 150 1e-30 seq654 141 7e-28 seq362 138 8e-27 seq1181 132 4e-25 seq1127 132 4e-25 seq291 120 2e-21 seq180 116 3e-20 seq10070 102 6e-16 seq22 100 2e-15 seq74 95.1 9e-14 seq324 91.5 1e-12 >seq259 Length=2316233 Score = 315 bits (348), Expect = 5e-80 Identities = 961/1466 (66%), Gaps = 22/1466 (2%) Strand=Plus/Minus Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484 ||| || ||||||||||| ||||||||||| | ||||| || || ||||| ||||| || Sbjct 1744348 GGCTGTGACATTAAGAATTCCATTGGCATCAATGTCAAAGGTCACCTCAATCTGAGGAAC 1744289 Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544 || || | ||||| || || || || | ||| ||||| || || || Sbjct 1744288 TCCCCTGGGTGCAGGAGGTATTCCAGTCAGGTCAAAGCGCCCCAGTAGGTTGTTGTCACG 1744229 Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604 || | ||||||||||| | | ||||| || ||| ||| ||||||||||| Sbjct 1744228 TGTCATAGCCCGTTCACCCTCATATACCTGGATCAGCACCCCAGGTTGGTTATCTGAATA 1744169 Query 281605 AGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 281663 || || || | |||| | | ||| || || || | || | | ||| | | Sbjct 1744168 TGTGGTGAAGA-TCTGTGTCTGCTTAGTGGGGATGGTGGAATTACGCTTAATCAGCACAG 1744110 Query 281664 TCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 281723 |||| | || |||||||| ||||| || ||||| ||||| | || || | | | | Sbjct 1744109 TCATCACGCCCCCAGCTGTCTCTAACCCTAGAGACAGAGGGGCCACGTCCAACAAAAGCA 1744050 Query 281724 TATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 281783 || || | |||||| | | ||| | | ||| ||||| || | ||||| |||| Sbjct 1744049 GATCCTGTACCTTTTCAGATTTGTCACCCATCAAAATGGCTGCCTGTACTGCAGCCCCAT 1743990 Query 281784 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG 281843 | || || || ||||||||||| | | | || || | ||||| ||| | | Sbjct 1743989 AGGCTACTGCCTCATCAGGATTGATGCTCTTGTTGAGATCACGTCCATTAAAATAGTCCT 1743930 Query 281844 AAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 ||| |||| ||| |||||||| || |||| || || || ||||| ||||| ||||| Sbjct 1743929 GAAGCAGTT-TCTGCACCTTAGGGATGCGAGTGGAGCCCCCGACTAAAACAATGTCATGG 1743871 Query 281903 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT 281962 | | | ||||||| || | ||| | | ||||||| || ||||| || | | Sbjct 1743870 ATTTTAGCCTTATCCATCTTGGCATCTCGAAGAGCTTTTTCCACAGGTTCCAGGGTACCC 1743811 Query 281963 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-T 282020 ||||||| ||||| ||| || ||||| || ||||| || | || | | || || | Sbjct 1743810 CTAAACAGGTCTGCACACAGCTCTTCAAACCGGGCTCTGGTGATAG--ATGTGTAGAAGT 1743753 Query 282021 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 282080 |||| ||||| | | ||||||| ||| | | | ||| || || || || | | Sbjct 1743752 CAATGCCTTCATAAAGTGAATCAATTTCCAGATTGGCTTGGGTGCTGGATGACAGGGTCC 1743693 Query 282081 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT--TTG--CTGATTGATTC 282136 || || || || || || || | | | | | |||| ||| ||| |||| Sbjct 1743692 TCTTGGCTCGCTCGCAAGCGGTACGCAAACGCCTCACGGCTCGCTTGTTCTGGCTGATG- 1743634 Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 282196 ||| | || | ||| || ||||| || || ||| | | ||||| | || || Sbjct 1743633 ---TCTTTCTTGTGTTTCCTTTTGAACTCCTCTACAAAGTGGTTCACAAGCCTGTTGTCG 1743577 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 || || || || || | | || | || | ||||| |||||| |||| ||||| Sbjct 1743576 AAGTCCTCTCCACCTAGGTGGGTGTCCCCAGCTGTAGCCTTTACTTCAAAAATCCCATCA 1743517 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT-T 282315 || | | || | | |||||| || || ||||||| |||||| || ||||||| | Sbjct 1743516 TCTATGGTCAGGATGGATACATCAAATGTGCCTCCACCCAAATCAAAGATGAGTACATGT 1743457 Query 282316 CATT-TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374 | | || || | || || | | ||| |||||||||| |||||||| || ||||||| Sbjct 1743456 CGCTCTCCCTGACCTGCCTTATCT-AAG-CCATACGCAATGGCAGCAGCTGTGGGTTCAT 1743399 Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434 | || ||||| | ||||| || || ||||| |||||||| || ||||| || | || Sbjct 1743398 TGATGATTCTTAGCACATTGAGTCCTGCAATCACACCTGCATCCTTGGTGGCCTGGCGTT 1743339 Query 282435 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATAT 282494 | || || || ||||| || || ||||| || || |||| || | | || | | Sbjct 1743338 GAGAGTCATTGAAATAGGCCGGTACAGTGATCACAGCATTGGTGATCAGGTGGCCTAAAA 1743279 Query 282495 AAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAAT 282554 |||| ||| |||| ||||| ||| | || | |||||| ||||||| ||| || | | Sbjct 1743278 AAGCCTCTGCAGTTTCCTTCATCTTAGTCAATACCATTGAAGAAATTTCTTCAGG-GTAG 1743220 Query 282555 ATTGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 282613 | |||| | || || ||| || || | | || || || |||| || Sbjct 1743219 AAAGCTTTTTTCTCCCCTTTATAGGACACCAGCACCTTGGGCTTGCCTCCTTCATTGATC 1743160 Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 282673 |||| ||| |||||| |||||||||||| || ||| | |||||||| | || ||| Sbjct 1743159 ACTTGAAAAGGCCAAAGTTTCATATCTGACTGCACAACAGGATCATTAAATTTCCTGCCA 1743100 Query 282674 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCT 282733 || | ||||| |||||||| | ||| || ||||| | || | || | ||||||| Sbjct 1743099 ATCAGACGTTTGGCATCAAAGACAGTGTTCTGAGGATTCATGGCTACCTGGTTTTTGGCT 1743040 Query 282734 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 282793 ||||| ||||| || ||||||| || || || | ||||| || || ||||| || Sbjct 1743039 GCATCCCCAATAAGCCGTTCTGTATCCGTGAAGGCCACATAGCTGGGGGTGGTGCGGTTG 1742980 Query 282794 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 282853 || || ||||| ||||| || || || || |||| || | || ||||||||| | | Sbjct 1742979 CCCTGGTCATTGGCAATGATCTCCACCTTGCCATGCTGGAACACCCCTACACAAGAATAG 1742920 Query 282854 GTTGTTCCTAAATCAATACCAATAGC 282879 || || || || || || || || || Sbjct 1742919 GTGGTACCCAAGTCGATGCCTATGGC 1742894 >seq557 Length=306283 Score = 150 bits (166), Expect = 1e-30 Identities = 196/268 (73%), Gaps = 5/268 (2%) Strand=Plus/Minus Query 282285 TTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGAC 282344 |||||||||||| |||||| || || | ||| | ||| | | | ||||| || | Sbjct 61428 TTCCACCACCCAGATCAAACATCAGGATGTTCTTCTCT---CCCTCCCTCTTATCCAGGC 61372 Query 282345 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 282404 |||| |||| |||||| || || || ||||| || || |||| |||||| || ||||||| Sbjct 61371 CATAAGCAATAGCAGCTGCTGTAGGCTCATTGATTATCCTCATAACATTCAGGCCAGCAA 61312 Query 282405 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 | |||| |||||||| || | ||| || | ||| |||||| | || || ||||||| Sbjct 61311 TAGTTCCAGCATCTTTGGTTGGTTGCTGCTGGGCATCATTAAAACAGGCCGGTACAGTAA 61252 Query 282465 TAACGGCATCTGTTA-CTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 ||| |||| || | ||||||| |||| |||||| || || | |||||||||| | Sbjct 61251 CAACTGCATGGGTAACCTTCTTTCCCAA-ATAAGCCTCAGCAGTCTCTTTCATTTTAGTG 61193 Query 282524 AAAATCATTGATGAAATTTGTTCTGGAG 282551 | ||| || | || |||| |||||||| Sbjct 61192 AGAATAATAGCAGAGATTTCTTCTGGAG 61165 >seq654 Length=198565 Score = 141 bits (156), Expect = 7e-28 Identities = 217/302 (72%), Gaps = 8/302 (3%) Strand=Plus/Plus Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| || | ||||| |||| |||||||||||||| |||||| | || | ||| Sbjct 161335 TCAATGGAGAGAAGAGACACATAGAAGGTTCCACCACCCAGATCAAACACCAGGATGTTC 161394 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 |||||| || | | |||| || | ||| ||| |||||| || || || ||||| Sbjct 161395 --TTCTTT-TCCTCCCTCTTATTCAGGCAATAAGCATTAGCAGCTGCTGTAGGCTCATTG 161451 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 || || |||| |||||| || |||||||| |||| |||||||| || ||||| | || Sbjct 161452 ATGATCCTCATAACATTCAGGCCAGCAATATTTCCAGCATCTTTGGTTGCTTGCCACTG- 161510 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496 | ||| |||| ||| | || |||||| ||| |||| || || | | |||| | |||| Sbjct 161511 GCATCATTAATATAGACTGGTTCAGTAACAACTGCAT-GGTAACCT-TCTTCCCAAATAA 161568 Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG--AAT 282554 || || || | |||||||||| | |||||||| | || |||| |||||||| ||| Sbjct 161569 GCCTCAGCAGTCTCTTTCATTTTAGTGAAAATCATAGCAGAGATTTCTTCTGGAGCAAAT 161628 Query 282555 AT 282556 || Sbjct 161629 AT 161630 >seq362 Length=1080710 Score = 138 bits (152), Expect = 8e-27 Identities = 195/269 (72%), Gaps = 5/269 (2%) Strand=Plus/Minus Query 282283 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 282342 ||||||||||| || |||||| || || | ||| |||||| || | || |||| || Sbjct 904211 GGTTCCACCACTCAGATCAAACATCAGAATGTTC--TTCTTT-TCCTCCTTCTTATACAG 904155 Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402 | ||| |||| |||||| || || || ||||| || || |||| |||||| || ||||| Sbjct 904154 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATCCTCATAACATTCAGGCCAGC 904095 Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 ||| |||| |||||||| || ||||| | || | ||| |||||||| | || |||| Sbjct 904094 AATAGTTCCAGCATCTTTGGTTGCTTGCCACTG-GCATCATTAAAATAGACTGGTTCAGT 904036 Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACT 282522 | || |||| || || | | ||| | |||||| | || | |||||||||| | Sbjct 904035 GACAATTGCATGGGTAACCT-TCTTCACAAATAAGCCTCCACAGTCTCTTTCATTTTAGT 903977 Query 282523 TAAAATCATTGATGAAATTTGTTCTGGAG 282551 | |||||| | ||||||| |||||||| Sbjct 903976 GAGAATCATAGCAGAAATTTCTTCTGGAG 903948 >seq1181 Length=43409 Score = 132 bits (146), Expect = 4e-25 Identities = 194/269 (72%), Gaps = 14/269 (5%) Strand=Plus/Minus Query 282283 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 282342 |||||||||||||| |||||| | || || ||| |||||| || | | ||||| || Sbjct 13318 GGTTCCACCACCCAGATCAAACACCAGGACGTTC--TTCTTT-TCCTCCCTCTTATCCAG 13262 Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402 | ||| |||| |||||| || || || ||||| || || |||| |||||| || | ||| Sbjct 13261 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATCCTCATAACATTCAGGCTAGC 13202 Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 ||| |||| |||||||| || |||| | || | ||| |||||||| | || |||| Sbjct 13201 AATAGTTCCAGCATCTTTGGTTGCTTCCCACTG-GCATCATTAAAATACACTGGTTCAGT 13143 Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACT 282522 || ||| |||| || || | | |||| | |||||| ||| ||||||||| | Sbjct 13142 AACAACTGCATGGGTAACCT-TCTTCCCAAATAAGC-CTT--------TTTCATTTTGGT 13093 Query 282523 TAAAATCATTGATGAAATTTGTTCTGGAG 282551 ||||| || | || |||| |||||||| Sbjct 13092 GAAAATTATAGCAGAGATTTCTTCTGGAG 13064 >seq1127 Length=50553 Score = 132 bits (146), Expect = 4e-25 Identities = 246/359 (69%), Gaps = 4/359 (1%) Strand=Plus/Plus Query 282195 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 282254 |||| ||||| || ||| | ||||| || ||||| | |||||||| | || Sbjct 9864 CAAAGTCTTCTCCACCCCGATGAGTATCTCTATTGGTAGCAATGACTTGGAAGACATCAA 9923 Query 282255 CTT--CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 || ||| | | ||||| |||| | |||||||||||| |||||| | || | Sbjct 9924 ATTGTCAATGGGGAGAAGAGACACATAGAAGTTTCCACCACCCAGATCAAACACCAGGAT 9983 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 ||| |||| | ||| | | | || || | ||| |||| |||||| | || || || Sbjct 9984 GTTC--TTCTCTCCCTTCCTCTATCTCCAGGCAATAAGCAATAGCAGCTTCTGTAGGCTC 10041 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||| || || || | |||||| || |||||||| |||| |||||||| || ||||| Sbjct 10042 ATTGATGATCCTGATAACATTCAGGCCAGCAATAGTTCCAGCATCTTTGGTTGCTTGCTG 10101 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 || | ||| |||||| | || || ||||||| ||| |||| || || | ||||||| Sbjct 10102 CTGGGCATCATTAAAACAGGCTGGTACAGTAACAACTGCATGGGTAACCTTCTTTCCAAA 10161 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 |||||| | || | ||||||| || | | ||| || | || |||| |||||||| Sbjct 10162 ATAAGCCTCAGAAGTCTCTTTCATTATAGTGAGAATAATAGCGGAGATTTCTTCTGGAG 10220 >seq291 Length=1898989 Score = 120 bits (132), Expect = 2e-21 Identities = 159/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 ||| | |||| ||| ||| |||||| || || || ||| |||| || |||| ||||| Sbjct 880865 TTAACCAGACGATAAGCAGTAGCAGCTGCTGTAGGCTCAGTAATGATCCTCATTACATTC 880924 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 || |||||||| |||| | |||||| | | || | || | ||| ||||||||||| Sbjct 880925 AGGCCAGCAATAGTTCCAGAATCTTTGCTTGACTGCCACTGGGCATCTTTAAAATATGCC 880984 Query 282455 GGAACAGTAATAACGGCATCTGTTA-CTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTT 282513 | ||||||| ||| |||| || | ||||||| |||| ||||| | || || | ||| Sbjct 880985 GTTACAGTAACAACTGCATAGGTAATCTTCTTTCCCAA-ATAAGTGTGAGCAGTATCTTT 881043 Query 282514 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 |||||| | | ||| || | ||||||| |||||||| Sbjct 881044 TATTTTAGTGAGAATTATAGCAGAAATTTATTCTGGAG 881081 >seq180 Length=4215775 Score = 116 bits (128), Expect = 3e-20 Identities = 486/757 (64%), Gaps = 30/757 (4%) Strand=Plus/Plus Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 281731 ||||||| ||||| | |||||| ||||||||||||||||| | || | | || |||| Sbjct 3460186 CCACCAGAAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAAGAGCAGCAAATCTTGA 3460245 Query 281732 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 281791 | |||| | | || || | ||| ||| | || | ||| |||||||| |||||| Sbjct 3460246 ACATTTTTA-GGCTATGTTCAGATAAAATGGCTACCTGGACAGCTGCACCATAAGCAACA 3460304 Query 281792 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 281851 || |||||||| || | | | ||||| || ||| ||||||| || | | ||||| Sbjct 3460305 GCATCATCAGGGTTGATACTCTCATTCCATTCTTTTCCATTGATGAAGTCCTACAGAAGC 3460364 Query 281852 TGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 281910 | ||| | || || ||| ||| || || || || | |||||| ||||| | ||| | Sbjct 3460365 T-TCTGAATCTGGGGGATATGAGTAGAACCACCCACCAGTACAATATCATGGATATGTAA 3460423 Query 281911 -TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACA 281969 ||| || | || | || | | | |||||| || || ||||| | | |||| Sbjct 3460424 CTTTGTCTAACTTGGCATTTCAAAGAGATTTTTCTACAGGATCAAGGGTGCCACGGAACA 3460483 Query 281970 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 282029 | | ||| ||||| ||| ||| | |||| | | || | | ||||||| Sbjct 3460484 GGATTCAAC-----TCTTCAAATCAAGCACAGGTAATGGAGGTATAGAAGTTGATTCCTT 3460538 Query 282030 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 282089 | | | |||||||| ||| | ||| || | ||||| || | | | ||||| | Sbjct 3460539 CATAGAGAGAATCAATCTCAGTACTAGCCTGTTTGCTGGAAGAGAGGGTATGCTTAGCTC 3460598 Query 282090 GTTCACATGCTGTCCTTAGTC-TTCGTAAG-GCTTTTGCTGATTGATTCAAATCTGTTTT 282147 ||||||||| || || | || | || |||||| | || | | || | || Sbjct 3460599 TTTCACATGCAGTATGGAGACGTTGGACAGCTCTTTTGTT--TTCACGGATGTCCTTCTT 3460656 Query 282148 ATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCAAAATCTTCAC 282206 || |||| |||||| || | | | | || || | ||| |||||||||||||| | Sbjct 3460657 ATGCTTTCCCTTGAACTCAGAGATAAAAAACATTGACCACACGGTTATCAAAATCTTCTC 3460716 Query 282207 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 282266 | ||||| | || | ||| |||| | || || | ||| || | Sbjct 3460717 CACCCAAGTGGGTGTCTCC------AGCTGTGGATTTGA---------CCTCAGTAGTGA 3460761 Query 282267 AAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT 282326 | | | |||||| || |||| || | || |||||| || ||||| |||| Sbjct 3460762 AGATTGACACATCAAAAGTGCCACTTCCTAAAT-AAAAATCAGCACATTTCTTTCAGCTC 3460820 Query 282327 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 282386 | ||||| || | | |||| |||| | ||| |||||||| | ||| || || || | Sbjct 3460821 CAACCTTTTTGTCTAAATCATAAGCAATAACAGTGGCAGTTGGCTAATTGATTATCCTAA 3460880 Query 282387 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 282423 ||||| |||||||||||| |||| || ||||| || Sbjct 3460881 GTACATTGAGACCAGCAATTATTCCGGCGTCTTTGGT 3460917 >seq10070 Length=1232 Score = 102 bits (112), Expect = 6e-16 Identities = 155/216 (72%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 282283 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 282342 ||||||||||| || |||||| | || | ||| |||||| || | ||||| || Sbjct 1129 GGTTCCACCACTCAGATCAAACACCAGGATGTTC--TTCTTT-TCCTCCGGCTTATCCAG 1073 Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402 | ||| |||| |||||| || || || ||||| || ||||||| |||||| || ||||| Sbjct 1072 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATTCTCATAACATTCAGGCCAGC 1013 Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 ||| |||| |||||||| || |||| || | ||| |||||||| || |||| Sbjct 1012 AATAGTTCCAGCATCTTTGGTTGCTTCCAACTG-GCATCATTAAAATAGATTGGTTCAGT 954 Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGC 282498 || ||| || | || || | | |||| | |||||| Sbjct 953 AACAACTGCGTGGGTAACCT-TCTTCCCAAATAAGC 919 >seq22 Length=17878332 Score = 100 bits (110), Expect = 2e-15 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| || || |||| |||||||||||||| ||||| || ||| | || |||||| | Sbjct 15457669 TGTACACTTATCCTGACTGAGGGAGATTCAGCCAAAACTTTGGCTGTTTCAGGCCTTGGT 15457610 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 ||| | || ||||| | ||||| |||||||| |||||||||||| | | ||||| | Sbjct 15457609 GTTGTAGGGAGAGACAAGTATGGTGTTTTCCCTCTTAGAGGAAAAATACTCAATGTCCGA 15457550 Query 400417 GATGCTAGTCCTAAA 400431 || ||| || |||| Sbjct 15457549 GAAGCTTCTCATAAA 15457535 >seq74 Length=8649107 Score = 95.1 bits (104), Expect = 9e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || || | ||| || |||| ||||||||||||||| ||||| || || || | ||| Sbjct 7579693 TTCTTGTCCAAACCGTAAGCAATAGCAGCAGCAGTTGGCTCATTGATTATCCTAAGTACA 7579752 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||||||||| |||| |||||||| || || || | || ||||| || || || Sbjct 7579753 TTGAGACCAGCAATGGTTCCGGCATCTTTGGTTGCCTGACGCTGAGAATCATTGAAGTAA 7579812 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || || || | || |||| Sbjct 7579813 GCTGGCACTGTGACCACAGCAT 7579834 >seq324 Length=1494514 Score = 91.5 bits (100), Expect = 1e-12 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 131183 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAC 131242 || || ||||| ||||| ||||| ||||||||| | || || | || |||||||| Sbjct 949248 GCTACTATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAGAGTCATTCATTAT 949307 Query 131243 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 131302 || ||||| || | || ||| |||||||| |||||||||||||| || ||||||||| Sbjct 949308 GGTGCTCCTAAAGAAATGGAATCATATTATCAGGAAATTGGTAGAGCTGGCCGTGATGGA 949367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740017537453158