Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq203 188 1e-41
seq112 185 1e-40
seq667 167 3e-35
seq31 87.8 3e-11
>seq203
Length=3504862
Score = 188 bits (208), Expect = 1e-41
Identities = 180/229 (79%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| |||| |||| ||| |||| |||||
Sbjct 2014569 TACAAGGTGCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 2014622
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||||||||| |||||||| |||| ||||||| ||||||| |||
Sbjct 2014623 GGCATCATGAACTCGTTTGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 2014682
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 2014683 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 2014742
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 2014743 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 2014791
Score = 185 bits (204), Expect = 1e-40
Identities = 179/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| |||| |||| || |||| |||||
Sbjct 3145906 TACAAGGTGCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 3145959
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| ||||||| |||
Sbjct 3145960 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 3146019
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| || ||||||
Sbjct 3146020 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCGGTGCGC 3146079
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 3146080 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 3146128
Score = 179 bits (198), Expect = 5e-39
Identities = 179/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| || ||| |||| || |||| |||||
Sbjct 1994475 TACAAGGTGCTCAAGCAGGTGCACCCCGACAC---TGG--CATC-TCGTCCAAGGCCATG 1994528
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||||||||| |||||||| |||| ||||||| ||||||| |||
Sbjct 1994529 GGCATCATGAACTCGTTTGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 1994588
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| || ||||||
Sbjct 1994589 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCGGTGCGC 1994648
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 1994649 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 1994697
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| |||| |||| || |||| |||||
Sbjct 3135545 TACAAGGTGCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 3135598
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| ||||||| |||
Sbjct 3135599 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 3135658
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 3135659 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 3135718
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||| ||||| |||||||||||||
Sbjct 3135719 CTGCTGCTGCCCGGGGAGCTGGCCAAGCATGCCGTGTCCGAGGGCACCA 3135767
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| |||| |||| || |||| |||||
Sbjct 3162908 TACAAGGTGCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 3162855
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| ||||||| |||
Sbjct 3162854 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 3162795
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| || ||||||
Sbjct 3162794 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCGGTGCGC 3162735
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 3162734 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 3162686
Score = 176 bits (194), Expect = 6e-38
Identities = 177/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| |||| |||| || |||| |||||
Sbjct 1900419 TACAAGGTGCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 1900366
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| ||||||| |||
Sbjct 1900365 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 1900306
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| || ||||||
Sbjct 1900305 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCGGTGCGC 1900246
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 1900245 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 1900197
Score = 176 bits (194), Expect = 6e-38
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| || ||| |||| || |||| |||||
Sbjct 1965307 TACAAGGTGCTCAAGCAGGTGCACCCCGACAC---TGG--CATC-TCGTCCAAGGCCATG 1965254
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| ||||||| |||
Sbjct 1965253 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 1965194
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| || ||||||
Sbjct 1965193 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCGGTGCGC 1965134
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 1965133 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 1965085
Score = 176 bits (194), Expect = 6e-38
Identities = 177/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| |||| |||| || |||| |||||
Sbjct 2062549 TACAAGGTGCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 2062602
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| ||||||| |||
Sbjct 2062603 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 2062662
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 2062663 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 2062722
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || || |||||||
Sbjct 2062723 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAAGGCACCA 2062771
Score = 176 bits (194), Expect = 6e-38
Identities = 177/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| |||| |||| || |||| |||||
Sbjct 2073127 TACAAGGTGCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 2073180
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| | ||||||| |||
Sbjct 2073181 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 2073240
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | | ||||||||||| || ||||||
Sbjct 2073241 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCGGTGCGC 2073300
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| |||||| || || ||||||||||
Sbjct 2073301 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 2073349
Score = 176 bits (194), Expect = 6e-38
Identities = 177/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| |||| |||| || |||| |||||
Sbjct 2798607 TACAAGGTGCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 2798554
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| ||||||| |||
Sbjct 2798553 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 2798494
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| || ||||||
Sbjct 2798493 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCGGTGCGC 2798434
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 2798433 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 2798385
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| |||| |||| || |||| |||||
Sbjct 2027528 TACAAGGTGCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 2027475
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| ||||||| |||
Sbjct 2027474 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 2027415
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| || ||||||
Sbjct 2027414 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCGGTGCGC 2027355
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 2027354 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 2027306
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| |||| |||| || |||| |||||
Sbjct 2026712 TACAAGGTGCTCAAGCAGGTGCACCCCAACACCGG-----CATC-TCGTCCAAGGCCATG 2026765
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| ||||||| |||
Sbjct 2026766 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 2026825
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| || ||||||
Sbjct 2026826 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCGGTGCGC 2026885
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||| | || ||||||||||
Sbjct 2026886 TTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCTTGTCGGAGGGCACCA 2026934
Score = 158 bits (174), Expect = 2e-32
Identities = 173/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| || |||| |||||
Sbjct 2815846 TACAAGGTGCTTAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 2815793
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| | || || || | ||||||| |||
Sbjct 2815792 GGCATCATGAACTCGTTCGTCAACGACATCTTTGAGCGTATTGCAGGCGAGGCCTCGCGC 2815733
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| || ||||||
Sbjct 2815732 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCGGTGCGC 2815673
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | | | ||| || ||||||| |||||| || |||||||||||||
Sbjct 2815672 CTGCTGCTCCCCGGGGAGCTGGCCAAGCACGCGGTGTCCGAGGGCACCA 2815624
Score = 140 bits (154), Expect = 5e-27
Identities = 171/232 (74%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||||| |||||||||||||| || | |||| ||| ||| ||
Sbjct 1716904 ATCTACAAGGTGCTGAAGCAGGTGCACCCTGACACAGG-----CATC-TCCTCGAAGGCC 1716957
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| |||||||| || || |||| ||||| | || || || | ||||||
Sbjct 1716958 ATGAGCATCATGAATTCCTTCGTCACTGACATATTTGAACGGATAGCTGGCGAGGCGTCG 1717017
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| || |||||||||| || ||| | || |||||||||||||| |||
Sbjct 1717018 CGCCTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACCGCGGTG 1717077
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||| | ||| || || ||||||| ||||||||| |||||||||||||
Sbjct 1717078 CGCCTGCTACTGCCTGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 1717129
Score = 89.7 bits (98), Expect = 7e-12
Identities = 117/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 724981 TGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGC 725040
|||| |||| ||||| ||||| |||| ||||||| ||||||| ||||||||||
Sbjct 1724433 TGAATACGTTCGTCAAGGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGCCTGGCGC 1724374
Query 725041 GCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCA 725100
|| |||||||||| || ||| | || ||||||||||| ||| |||||||| |
Sbjct 1724373 ACTGCAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCATGCGCCTGCTGC 1724314
Query 725101 TGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| || ||||| | |||| | | |||||| |||||
Sbjct 1724313 TGCCTCCTGAGCTGGCTAAGCACTCGGGGCCCGAGGACACCA 1724272
>seq112
Length=6271480
Score = 185 bits (204), Expect = 1e-40
Identities = 179/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 184830 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 184883
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| | |||||| |||
Sbjct 184884 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCCCGC 184943
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| |||| ||||||||||| || ||||||
Sbjct 184944 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCGGTGCGC 185003
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 185004 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 185052
Score = 185 bits (204), Expect = 1e-40
Identities = 179/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 220372 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 220319
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| | |||||| |||
Sbjct 220318 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCCCGC 220259
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| |||| ||||||||||| || ||||||
Sbjct 220258 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCGGTGCGC 220199
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 220198 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 220150
>seq667
Length=186015
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||| |||||||||||||||||| |||| |||| || |||| |||||
Sbjct 45275 TACAAGGTCCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 45328
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| | || ||||||| || ||||||| |||
Sbjct 45329 GGCATCATGAACTCGTTCGTCAACGACATCTTTGAGCGCATCGCCAGCGAGGCCTCCCGC 45388
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | |||||| | || || ||||||||
Sbjct 45389 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGCGAGGTGCAAACGGCCGTGCGG 45448
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 45449 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCGGAGGGCACCA 45497
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||| |||||||||||||||||| |||| |||| || |||| |||||
Sbjct 51059 TACAAGGTCCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 51006
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| | || ||||||| || ||||||| |||
Sbjct 51005 GGCATCATGAACTCGTTCGTCAACGACATCTTTGAGCGCATCGCCAGCGAGGCCTCCCGC 50946
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | |||||| | ||||| ||||||||
Sbjct 50945 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGCGAGGTGCAGACGGCCGTGCGG 50886
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||| || || || ||||||||||
Sbjct 50885 CTGCTGCTGCCCGGGGAGCTGGCCAAGCATGCTGTGTCGGAGGGCACCA 50837
>seq31
Length=13776510
Score = 87.8 bits (96), Expect = 3e-11
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 724980 ATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCG 725039
||| ||||||| | || |||||| |||| ||||||| || |||||||| ||||||||
Sbjct 10339526 ATGGACTCGTTCATTAAGGACATGTTCGAGCGCATCGCCAGTGAGGCCGGCCGCCTGGCC 10339467
Query 725040 CGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATC 725099
||| ||| | || || ||| | | | ||||||||||| || |||||||| |
Sbjct 10339466 CGCCAGAACCATCGGTCGACCATCACCTCCAGAGAGATCCAGACGGCTGTGCGCCTCCTG 10339407
Query 725100 ATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| ||| || | || ||||| || || ||||||||||
Sbjct 10339406 CTGCCCGGGGAGATCAACAAACACGCGGTGTCTGAGGGCACCA 10339364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176607191706246
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |