Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq536 208 6e-49 seq299 145 6e-30 seq260 131 1e-25 seq59 122 7e-23 seq131 116 3e-21 seq64 107 2e-18 seq82 104 2e-17 seq2 91.5 1e-13 seq58 89.7 4e-13 seq73 86.0 5e-12 >seq536 Length=337149 Score = 208 bits (230), Expect = 6e-49 Identities = 591/899 (66%), Gaps = 48/899 (5%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 || ||| | ||||| || || | |||| || |||| |||| || ||||| |||| Sbjct 202637 TTGGTCATCTTTCCTATGGAACACCATGGTATCCGGCAGATGTGTAAGAAAGCTGAGGCT 202578 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCAT 43817 || ||||||||||| || || || | | | | | ||| | ||||| ||| || Sbjct 202577 TCCTTTTGGACAGCTGAGGAGGTGGCTCTTCC-AGGGACATTCAGCAC--TGGGAAGCCC 202521 Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877 | || || | ||| || |||||||||| || |||| || | ||| || | || Sbjct 202520 TGAAGCCTGAGGAACAATATTTTATATCCACA-TTCTGGCTTTCTCTGCGGCAGGTGATA 202462 Query 43878 GGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCA 43936 | ||||| || || |||||||| || | || || |||||||||||| | ||||||| Sbjct 202461 GCATAGTAAAGGAGAATTTGGTGGAGCCATTTAGC-CAAGAAGTTCAAATTACAGAAGCC 202403 Query 43937 CGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTT 43996 || |||| ||||| || ||||||||||| ||||| || ||||| |||||||| |||||| Sbjct 202402 CGCAGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTT 202343 Query 43997 CTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056 || || || || || || ||||| | || | | | | || ||||| | ||| Sbjct 202342 CTTATTGACACTTATATTAAAGACTTCAAAGAAAGGGAATTTCTCTTCAATGCCACTGAA 202283 Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAAT 44113 ||| | ||| | || | ||||| |||||| | | | ||| | | | Sbjct 202282 ACAATGCCTTGTGTGAAGAAGAAAGC--CATGGGCCTTGCATTTGATTGGGGACAAAGAG 202225 Query 44114 GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173 | | | | ||||||||| |||| || ||||| | | |||| | || |||||||| Sbjct 202224 GCTACCTATGGAGAACGTGTTGTAGCCTTTGCTGCTATGGACAGAATCTTCTTTTC---- 202169 Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233 ||| | ||||||||||| |||||||||| | || ||||| Sbjct 202168 ------------------TGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCC 202127 Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293 ||||| | || || | ||||| || ||||| || || ||||| ||| || | || | Sbjct 202126 AATGAACTTATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGCTCAAA 202067 Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353 | || | | | || || ||| ||| | | | ||| | || | | || | Sbjct 202066 CACCT--GCTTC-ACAAACCATCAGAGCAGAGAGTAAAAGAAACAATTATCAATGCCTTC 202010 Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGA 44412 |||||||| || || || | ||| ||| || |||| || |||| || ||||| || Sbjct 202009 AAGATAGATCAGGAGTTCCTCACAGAAGCCTTGCCTGAGAAGCTAATTGGGATGAATTGC 201950 Query 44413 ACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTG 44472 || ||||||||| || || ||||||| | |||||| | | | || | ||||| | Sbjct 201949 AC-TTTGATGAAGCAGTACATTGAATTTGTGGCAGATAGGCTTATGCTGAAGCTGGGCT- 201892 Query 44473 CGATAAACACTATATT----GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGG 44528 | |||| || || ||| |||| || ||| | |||||||| |||||||| | | Sbjct 201891 ---TTAACAAGATTTTCAAAGTAGAAAATCCATTTAACTTTATGGAGAATATTTCACTAG 201835 Query 44529 AAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 |||| ||||| ||||| ||||| || | || || || |||||| |||||| || ||| Sbjct 201834 AAGGGAAAACTAACTTCTTTGAGAAGGGAGTAGGCGAGTATCAGAAAATGGGAGTGATG 201776 >seq299 Length=1791600 Score = 145 bits (160), Expect = 6e-30 Identities = 312/461 (68%), Gaps = 13/461 (3%) Strand=Plus/Plus Query 44118 CTTTTGGAGAACGACTTGTCGCGTTTGCAGTT--GTGGAAGGCATTTTCTTTTCAGGATC 44175 ||||||| ||| || | || || | ||||| |||||||| |||||||| | |||||| Sbjct 1082978 CTTTTGGGGAAAGAGTGGTGGCCAT--CAGTTCTGTGGAAGGAATTTTCTTCTGAGGATC 1083035 Query 44176 GTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAA 44235 ||||| | || || ||||||||||| ||||| || ||||| | || ||||| || Sbjct 1083036 -TTTGCTACTATTTTCTGGTTAAAGAAGAGAGGTCCCATCCCTGGACTCACATTTTCCAA 1083094 Query 44236 TGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATA 44295 |||| | || | | ||||||| | | | || ||||||||| | | || || Sbjct 1083095 TGAGCTGATCAACAGAGATGAAGAACTTCTCTATGACTTTGCTTGCCTAGTGTTTCAGTA 1083154 Query 44296 TCTAGGAGACGATAAGCCTTCATGTAAGACAA---TTACAGATATTGTTGTAGAGGCAGT 44352 ||| | | |||| ||||| |||| || | | || || |||| | || || Sbjct 1083155 CTTAGTAAA---TAAGACTTCAG--AAGAAAAGGGTGAGGGAGATCATTGTTAATGCTGT 1083209 Query 44353 AAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGA 44412 || || || || || ||| | ||| || || || || | || | ||||| Sbjct 1083210 CAAAATTGAGCAGGAGTTTTTAACAGAAGACTTGCCAGTTGGCCTCATTAGGATGAACTG 1083269 Query 44413 ACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTG 44472 ||||||||| ||| |||||||||| || || || | |||||| ||||||| || | Sbjct 1083270 TGTTTTGATGAGCCAGTATATTGAATTTATAGCTGAAAGATTACTTATGGAACTTGGATT 1083329 Query 44473 CGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGG 44532 | || | | | | |||| || ||||||||||||||||| ||||| || ||||| Sbjct 1083330 CTCAAAGGTTTTTCAGGCAGAAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAAGG 1083389 Query 44533 CAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGC 44573 |||||||| || ||||| ||| ||| ||| ||||||| Sbjct 1083390 GAAAACAAATTTCTTTGAGAAAAAAGTTTCAGAGTATCAGC 1083430 Score = 131 bits (144), Expect = 1e-25 Identities = 213/299 (71%), Gaps = 12/299 (4%) Strand=Plus/Plus Query 43948 TGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATAC 44007 ||| ||||||||| |||| | ||| |||| || ||| || ||| | || |||||||| Sbjct 1082538 TGGTTTTCAAATTCTCATAAAGAATGTTCACTC--AAAGATATAGTTTGCTAATAGATAC 1082595 Query 44008 GTACATCAAAGATGGGCACGAGAAGC-ATCGATTGTTTAATGCGATAGAAACAGTACC-T 44065 | |||| |||| || || | | | || |||||||| || ||||| | || | Sbjct 1082596 TTGAATCAGAGATTC-CAAGAAAGGGGAATTTTTATTTAATGCAATTAAAACAATGCCAT 1082654 Query 44066 GCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA---ATTCAAATGATTCTTTT 44122 || | | | | ||||||||||||||||| ||||||| || ||| | ||||| Sbjct 1082655 ACGTTAAGAAAAAAAGCAGACTGGGCCCTGTGATGGATAGTAGATAGAAAGTCTACTTTT 1082714 Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTT--GTGGAAGGCATTTTCTTTTCAGGATCGTTTG 44180 || ||| || | || || | ||||| |||||||| |||||||| |||||||| |||| Sbjct 1082715 GGGGAAAGAGTGGTGGCCAT--CAGTTCTGTGGAAGGAATTTTCTTCTCAGGATCTTTTG 1082772 Query 44181 CGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAG 44239 | || || || ||||||||||| ||||| || ||||| | || ||||| |||||| Sbjct 1082773 CTGCTATTTTCTGGTTAAAGAAGAGAGGTCCCATCCCTGGACTTACATTTTCCAATGAG 1082831 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 |||||| | ||||||||||| || | ||| || ||| ||||||| || | |||||||| Sbjct 1082145 TTTGTCATATTTCCAATTCAGTACCCTGATATTTGGAAAATGTATGAACAGGCACAGGCA 1082204 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTT 43788 || || |||||||||||||| ||||| || Sbjct 1082205 TCCTTCTGGACAGCAGAAGAGGTTGACTT 1082233 >seq260 Length=2306558 Score = 131 bits (144), Expect = 1e-25 Identities = 529/818 (65%), Gaps = 33/818 (4%) Strand=Plus/Minus Query 43836 ATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATT 43895 ||||||| ||| || || || ||||| || || || || ||||| |||||||||| Sbjct 2180724 ATTTTATGTCTCATATTATGAATTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAATT 2180665 Query 43896 TGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954 |||| ||| | || || ||||||||| | |||||| | ||||| |||| || Sbjct 2180664 TGGTGGAGTGATTAAGC-CAGGAAGTTCAAATTACAGAAGTTCACTGTTTCTATGACTTC 2180606 Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014 ||||||||||| ||||| | |||| |||||||| ||||| || || || || || Sbjct 2180605 CAAATTGCCAT-GAAAAACTACATTGTGAAATGTATAGTCTCCTTATTGACACTTA---- 2180551 Query 44015 AAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAA 44074 |||||| | || | | | | || ||||| || |||||| | ||| | || Sbjct 2180550 AAAGATTTCAAAGAAAGGGAATTTCTCTTCAATGCCATTGAAACAATGCCTTATGTAAAG 2180491 Query 44075 CATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACGA 44131 | |||||| | | || | | | ||||| | | | | | | | ||||| | Sbjct 2180490 AAAAAAGCAAATTAGGTCTTGCATTGGATTGGGGACAAAGAAGCTACCTACAGAGAATGT 2180431 Query 44132 CTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTT 44191 |||| || |||| | ||||||||| | ||||| | | || |||| | ||||| Sbjct 2180430 GTTGTAGCCTTTGTGGCTGTGGAAGGAAACTTCTTCTATGTTTCTTTTGAATCAATATTC 2180371 Query 44192 TGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGT 44251 | ||| ||||||| || ||||||||||| | | |||| | ||| | || || | Sbjct 2180370 TAGTTCAAGAAACAGGGATTGATGCCTGGCCTAA--GTTTCCAGTGAACTTATTAGCAGA 2180313 Query 44252 GATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAG 44311 ||||| || |||| || || | ||||||| || | | | | || | || | || Sbjct 2180312 GATGAGGGTTTACTTTATGACTCTGCTTGCCTGATGTTCAAACACCT--GCTAC-ACAAA 2180256 Query 44312 CCTTCATGTA--AGACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAAT 44369 || | || | ||| | | | ||| || || | | || || | ||||||| || | Sbjct 2180255 CCAT--TGGAGCAGAGAGTAAAAGAAATATTTATCAATGCTGTCAGCTTAGAACAGGAGT 2180198 Query 44370 TTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGAACTTTTGATGAACCAA 44428 | || | || || ||||| || || | || || || || || ||||||||| || Sbjct 2180197 TCATCATGGAGGCTTTGCCTGTGAAGTTCACTGGGATAAACTGCAC-TTTGATGAAGCAG 2180139 Query 44429 TATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATT 44488 |||||||||| | | ||| | | || | || | ||||| | | | || | || Sbjct 2180138 TATATTGAATTCGTGGCACACAGGTTTATGATGAAGCTGGGCT----TTAGCAAGGTTTT 2180083 Query 44489 ----GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTT 44544 ||| |||| | ||||| |||||||| ||||||| |||||| ||| | ||||| Sbjct 2180082 CAGAGTAGAAAATTCATTTGACTTTATGGAGAATATTT-AATGGAAGACAAGATTAACTT 2180024 Query 44545 TTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATGATAA---CAAGTGACAA 44601 ||||| || || || || |||||| | |||| | ||| || ||| | || Sbjct 2180023 CTTTGAGAAGAAAGTAGGTGAGTATCAGAGGGTGGGAGAGATGTCAAATCCAACAGGGAA 2179964 Query 44602 TAAATTTACTACGGATGAAGATTTCTAATTAATCAGAA 44639 | | ||||| ||||| || |||||| | | ||||| Sbjct 2179963 TTATTTTACCTTGGATGCTGACTTCTAAATGAACAGAA 2179926 >seq59 Length=10161055 Score = 122 bits (134), Expect = 7e-23 Identities = 213/307 (69%), Gaps = 5/307 (2%) Strand=Plus/Plus Query 43717 TCAAT-ATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAG 43775 ||||| | ||||| || ||||||||||| || ||||| ||||||| || |||||||| | Sbjct 9902409 TCAATCACCATGATATTTGGCAAATGTATAAGAAAGCCGAGGCGTCCTTCTGGACAGCGG 9902468 Query 43776 AAGAAGTTGATTTGACTAAAGAC--TTAGCACATTGGATTGCATTAAAACCACAAGAAAA 43833 | || || ||| | | || ||| | ||||| || || | || || | ||| Sbjct 9902469 AGGAGGTGGATCTTTCCAAGGACAGTCAGCAC--CGGCAGGCCCTGAAGCCTGAGGAATG 9902526 Query 43834 ACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAA 43893 | |||||||||| ||| | || || |||| || | || || |||| | |||||| Sbjct 9902527 ATATTTTATATCACATGTTCTAGCTTTCTTTGAAGCACGTGATGGCATAGCAAGTGAAAA 9902586 Query 43894 TTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTT 43953 | |||| || ||| ||||| |||||| | |||||| | ||||| | ||| || Sbjct 9902587 TCTGGTGCAGCGATTTAGCCAAGAGGTTCAAATTATAGAAGCCGGCTGTTTCTGTGGCTT 9902646 Query 43954 TCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013 ||| |||| || ||||| || ||||| ||||| || |||| || || || | ||||| Sbjct 9902647 CCAAGTTGCTATGGAAAACATACATTCTGAAATATATGGTCTCCTTATTGACATTTACAT 9902706 Query 44014 CAAAGAT 44020 ||| || Sbjct 9902707 TAAAAAT 9902713 >seq131 Length=5549739 Score = 116 bits (128), Expect = 3e-21 Identities = 139/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 43836 ATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATT 43895 ||||||||| | || |||| || ||||| || || || || |||| |||||||||| Sbjct 3232891 ATTTTATATTGCTTGTCCTGGCTTTCTTTGCAGCAAGTGATGGCATAGCAAATGAAAATT 3232950 Query 43896 TGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954 |||| | | || || |||||||||||| | |||||| | ||||| ||||| || Sbjct 3232951 TGGTGGAATAATTTAGC-CAAGAAGTTCAAATTACAGAAGTGGGCTGTTTCTATGGCTTC 3233009 Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014 || |||||| |||||| || ||||| ||||||| ||||| || || || || ||||| Sbjct 3233010 CAGGTTGCCACAGAAAACATGCATTCTAAAATGTAGAGTCTCCTTATTGACACTTACATT 3233069 Query 44015 AAAGAT 44020 |||||| Sbjct 3233070 AAAGAT 3233075 >seq64 Length=9676502 Score = 107 bits (118), Expect = 2e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 |||||||||||| | ||||||| || ||||| ||||| || ||||||||||| ||||| Sbjct 6349571 CAAGAAGTTCAAGTTACAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAAC 6349630 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA 44019 || ||||| |||||||| ||||| || || || || ||||| ||||| Sbjct 6349631 ATACATTCTGAAATGTATAGTCTCCTTATTGACACTTACATTAAAGA 6349677 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 |||||||| |||| || ||||| | |||||| || || |||||||| || || ||||| Sbjct 6351412 GGAGAACGTGTTGTAGCCTTTGCTGCTGTGGAGGGAATCTTCTTTTCTGGTTCTTTTGCT 6351471 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 | ||||| ||| | ||||||||||| |||||||||| | || ||||| ||||| | Sbjct 6351472 TCAATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTT 6351531 Query 44243 ATAAGTCGTGATGA 44256 || || | ||||| Sbjct 6351532 ATTAGCAGAGATGA 6351545 >seq82 Length=8104705 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 |||||||| |||| || || ||| | || ||||| ||||| ||||| || |||| Sbjct 34664 TGATGGCACTGCCTCCATGCCATGCCCTCTGCCAGTTCTACGTGGTGAATGGGGAGCTGT 34605 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || || |||| || || |||||||||||||| || || || || || ||||| || | Sbjct 34604 CCTGCCAGCTGTACCAGAGGTCAGGTGACATGGGCCTGGGCGTGCCCTTCAACATCGCCA 34545 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198 | ||| | ||||| || || |||||||||||| Sbjct 34544 GCTATTCCCTGCTTACCTACATGATTGCACAC 34513 >seq2 Length=46620681 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| | Sbjct 41397785 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAAGGGAAAACAAATTTCTTTGAGA 41397844 Query 44553 AACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 |||| ||| ||| |||||||| | | ||| ||| Sbjct 41397845 AACGAGTTTCAGAGTATCAGCGTTTTGCCGTTATG 41397879 >seq58 Length=10378366 Score = 89.7 bits (98), Expect = 4e-13 Identities = 480/756 (63%), Gaps = 72/756 (10%) Strand=Plus/Minus Query 43836 ATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATT 43895 |||||||| | ||| |||| |||| || | | || || ||| | ||||||| | Sbjct 1969226 ATTTTATAGCACATGTTCTGGC--TTTTAGCAG---GTGATGGCATAATACATGAAAAAT 1969172 Query 43896 TGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTC 43955 |||| | | ||| |||||| ||||| | ||||||| | ||||| ||||| || | Sbjct 1969171 TGGTGAAGCAATTTAGCCAAGAAATTCAAATTACAGAAGCCCACTGTTTCTATGGATTCC 1969112 Query 43956 AAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCA 44015 |||||||||||| ||| || ||||| | ||| |||||| | || || | |||| | Sbjct 1969111 AAATTGCCATAGGAAAAATACATTCTGTAATATACAGTTTCCTTATTG----TCACATTA 1969056 Query 44016 AAGATGGGCACG-AGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAA 44074 || || | | | ||| || | | || |||| | |||| | ||| | || Sbjct 1969055 AAAATTCCAAAGAAAAAGAATTTA-TCTTCAATGGCACTGAAATGATGCCTTGTGTGAAG 1968997 Query 44075 CATAAAGCAGACTGGGCCCTTAAAT--GGATAAATTCAAATGATTCTTTTGGAGAACGAC 44132 | ||| |||| | || ||| |||||| ||| | || |||||| | Sbjct 1968996 AAGAAAACAGATTTGG------AATCAGGATAA----AAAGTCTATTTGTGGAGAGCATG 1968947 Query 44133 TTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGC--CATATT 44190 ||| || ||||| |||||||| || |||||||| || || ||||| | ||||| Sbjct 1968946 ATGTAGCCTTTGCTAATGTGGAAGAAATCTTCTTTTCTGGTTCTTTTGCATCAATATATT 1968887 Query 44191 TTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCG 44250 || | |||||| || | |||||||||| | || ||||| ||||| | || || | Sbjct 1968886 CTGACTTAAGAAATGACGGCTGATGCCTGGTCTCACATTTTCCAATGAACTTATTAGCAG 1968827 Query 44251 TGATGAAGGCTTACATTGCGATTTTGCTTGCT---TGT-----TACTTG-GATA---TCT 44298 ||||| | |||||||| |||| ||| |||||| | | | | Sbjct 1968826 AGATGA-----------GTGATTTTGCCTGCTCAATGTTCAAATACTTGCTACACACTGT 1968778 Query 44299 AGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAGAT 44358 ||||| || || ||| ||||| || ||||| | ||| Sbjct 1968777 GGGAGAAGA-------GGATAAAAG-TAATTATCAATTTTGTT------------AGGAT 1968738 Query 44359 AGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGAACTTT 44417 |||||| || || | || | || || ||||| || | || || ||||| || | || Sbjct 1968737 AGAACAGGAGTTCCTCACCAAGGCCTTGCCTGTGAAGCTCATTGGGATGAACTGCTC-TT 1968679 Query 44418 TGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATA 44477 ||||||| || | ||||||| | ||||| | | | || ||||||| | | || Sbjct 1968678 TGATGAAGCAGTGCATTGAATTTGTAGCAGACAGGCTTATGCTGAAACTGGGCT-CTATC 1968620 Query 44478 AACACTAT-ATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAA 44536 | | | | | ||| |||| || |||| ||||||| |||||||| ||||||| || Sbjct 1968619 GAGATTTTCAGAGTAGAAAATCCACTTGACATTATGGAGAATATTTCACTGGAAGGGAAG 1968560 Query 44537 ACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAG 44572 || ||||| ||||| || | || | || |||||| Sbjct 1968559 ACTAACTTCTTTGAGAAGAGAGTAGTTGAGTATCAG 1968524 >seq73 Length=8706776 Score = 86.0 bits (94), Expect = 5e-12 Identities = 116/162 (72%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 19540 AAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGT 19599 || ||| ||||||||| || || | |||||| | || || ||||| ||||| ||||| Sbjct 2050097 AACAGTGGTTTGCACATCATCATCTTTGATGAAATTGATGCCATCTGCAAGCAGAGAGGG 2050038 Query 19600 T------CTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTA 19653 ||||| | |||||| ||||||||||| ||||| || | ||||| ||| | Sbjct 2050037 AGCATGGCTGGTAGCACTGGAGTTCATGACACTGTCGTCAACCAGTTGCTGTCCAAAATT 2049978 Query 19654 GACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATG 19695 ||||| || | || ||||| ||||| | || ||||| ||| Sbjct 2049977 GACGGGGTAGAACAGCTGAACAATATCCTTGTCATTGGTATG 2049936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397395532410415