Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq14 91.5 1e-13
>seq14
Length=21378024
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || |||| || | ||||| || | || || ||||| || || ||||| ||
Sbjct 6329959 TGCCACCTCGCAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCTG 6329900
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| |||| | || || |||||||| || || | || |||||||| ||||| || |
Sbjct 6329899 AGAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAATATCAGACGCTGCTGATCAGGTG 6329840
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | ||||| || || || ||| ||| | | || | ||||| ||| ||||
Sbjct 6329839 GGATGCCCTCCTTGTCTTGAATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAA 6329780
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
| || || || || | ||||||||||| || ||||||||||| ||||| ||||
Sbjct 6329779 CCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 6329725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424869751941096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |