Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq536 338 9e-88 seq260 259 7e-64 seq59 248 1e-60 seq131 197 2e-45 seq58 194 2e-44 seq3 140 5e-28 seq299 125 1e-23 seq64 116 5e-21 seq30 114 2e-20 seq11673 102 1e-16 seq2 96.9 5e-15 seq128 89.7 7e-13 seq152 86.0 9e-12 >seq536 Length=337149 Score = 338 bits (374), Expect = 9e-88 Identities = 641/940 (68%), Gaps = 35/940 (4%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| ||||||||||| |||| || | |||| ||||||| | || ||||| ||||| Sbjct 201725 GTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTCC 201784 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 |||||| ||||| || || || | ||||| || || |||||||| ||||| | ||| || Sbjct 201785 CATTTTCTGATACTCGCCTACTCCCTTCTCAAAGAAGTTAGTTTTCCCTTCTAGTGAAAT 201844 Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTA-ATTCTG 47964 ||| |||||||| | ||||||||| || | || |||| || ||||| || | ||| | Sbjct 201845 ATTCTCCATAAAGTTAAATGGATTTTCTACTTTGAAAATCTTGTTAAAGCCCAGCTTCAG 201904 Query 47965 AAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA 48024 || || |||||||| || ||||| || || ||||||| |||||||| || | Sbjct 201905 -CATAAGCCTATCTGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCAA 201963 Query 48025 TAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTA 48084 | || || | || | || || || || ||||| || || || ||| |||| | | Sbjct 201964 TTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACTCCTGATCTATCTTGAAGGCATTGATAA 202023 Query 48085 TTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATG 48144 || | | |||| | | ||| |||| | | || ||||| | ||| | || | Sbjct 202024 TTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGAAGCAGGTGTTTGAGCATCAGGCAGG 202083 Query 48145 CAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204 |||| ||||| || | ||| |||||||| ||||| | ||| || ||||||||||| || | Sbjct 202084 CAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAG 202143 Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264 |||| ||||| ||||| ||||| ||||||||||| || | Sbjct 202144 GCATCAGTCCTCGTTTCTTGAG----------------------CCAGAAAAGAAGATTC 202181 Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GTATCC 48321 || | || ||||| || || | ||||| || | || || |||| ||| Sbjct 202182 TGTCCATAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCA 202241 Query 48322 ACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 48381 | | ||||| || |||||||| ||||||||||||||||| | ||||| |||| Sbjct 202242 AATGCAAGGCCCA--TGGCTTTCTTCTTCACACAAGGCATTGTTTCAGTGGCATTGAAGA 202299 Query 48382 GAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGG 48441 |||| | |||| ||| ||||||| ||||| || || | ||||||||||||||| | Sbjct 202300 GAAATTCCCTTTCTTTGAAGTCTTTAATATAAGTGTCAATAAGAAGACTATACATTTCAG 202359 Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501 | || || ||||| || || || || || || || |||| | |||||||| || || | Sbjct 202360 AATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATTTGAA 202419 Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 | || | |||| | || |||||||||| |||||||| | ||||| || ||| | | Sbjct 202420 CTTCTTGGCTAAATGGCTCCACCAAATTCTCCTTTACTATGCTATCACCTGCCGCAGAGA 202479 Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGA 48621 | || | | || | |||||||||| ||| | | |||| | ||||| | | Sbjct 202480 AAGCCAGAATGTGGAT-ATAAAATATTGTTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAA 202538 Query 48622 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACA 48681 | || | || | | | || || |||||||||||||| || ||||| ||||| ||| ||| Sbjct 202539 TGTCCCTGGA-AGAGCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTACACA 202597 Query 48682 TATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 | | || ||| || || || || || || || || || Sbjct 202598 TCTGCCGGATACCATGGTGTTCCATAGGAAAGATGACCAA 202637 >seq260 Length=2306558 Score = 259 bits (286), Expect = 7e-64 Identities = 628/941 (67%), Gaps = 19/941 (2%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| |||| |||||| |||| || | ||||| ||| || | || ||||| |||| Sbjct 2179930 GTTCATTTAGAAGTCAGCATCCAAGGTAAAATAATTCCCTGTTGGATTTGACATCTCTCC 2179989 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 || | ||||| ||||| || ||||| || || ||| | ||| |||||| | | || Sbjct 2179990 CACCCTCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCCATTAA-AT 2180048 Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGA 47965 ||| |||||||| ||||||| ||| || | | ||| || |||| || | | Sbjct 2180049 ATTCTCCATAAAGTCAAATGAATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCTTCAT 2180108 Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTAT 48025 || | || | ||| |||||||| ||||| ||||||| || || || || | Sbjct 2180109 CATAAACCTGTGTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTTATCCCAGT 2180168 Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085 | || || || | ||||||| | | ||||| ||||| | ||||||||| | | Sbjct 2180169 GAACTTCACAGGCAAAGCCTCCATGATGAACTCCTGTTCTAAGCTGACAGCATTGATAAA 2180228 Query 48086 TATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGC 48145 ||| | |||| | | ||| |||| | | || ||||| ||||| | || || Sbjct 2180229 TATTTCTTTTACTCTCTGCTCCAATGGTTTGTGTAGCAGGTGTTTGAACATCAGGCAAGC 2180288 Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205 | | ||| || | | ||| |||||||| ||||| | ||| | |||| | || || || Sbjct 2180289 AGAGTCATAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAACTT--AGGCCAGG 2180346 Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCC 48265 ||| | ||| |||| |||| | | ||||||| | ||||| || | ||||| | || Sbjct 2180347 CATCAATCCCTGTTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAGAAGTTTCC 2180406 Query 48266 TTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCA 48322 ||| || ||| |||| || || | |||| ||| | ||||| |||| ||||| Sbjct 2180407 TTCCACAGCCACAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCCCCAATCCA 2180466 Query 48323 CCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 48382 | || ||| || || ||||||||| ||||||||||||| || ||||| ||||| Sbjct 2180467 ATGCAAGACCTAATTTGCTTTTTTCTTTACATAAGGCATTGTTTCAATGGCATTGAAGAG 2180526 Query 48383 AAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGA 48442 ||| | |||| ||| |||||| ||||| || || | |||||||||||||| | Sbjct 2180527 AAATTCCCTTTCTTTGAAATCTTT----TAAGTGTCAATAAGGAGACTATACATTTCACA 2180582 Query 48443 GTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC 48502 || | ||||| || || || || || | || ||||| ||||||| || || || Sbjct 2180583 ATGTAGTTTTTC-ATGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTAATTTGAAC 2180641 Query 48503 CTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAA-AA 48561 ||| | |||| || ||||||| ||||||||||| |||||||| || ||||| || Sbjct 2180642 TTCCTGGCTTAATCACTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAA 2180701 Query 48562 ATGC-TAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTG 48620 || | |||| ||| ||||||||| ||| | || |||| | | ||| Sbjct 2180702 ATTCATAAT--ATGAGACATAAAATATCATTCCTCAGATTTCAGGGCTTCCTAGTGCAGA 2180759 Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATAC 48680 || || || || ||| | || || || |||| |||| || | || || || ||| | Sbjct 2180760 ATGTCCTTGGAAATAGCCACCTCCCCATATGTCAAAAAGGAACCTTCAGCCTTCTTAGAA 2180819 Query 48681 ATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || | ||| |||||| |||| ||| || || | ||||| Sbjct 2180820 ATCTGCCAAATATCATGGTATCTGATAGGAAAGAAGACAAA 2180860 >seq59 Length=10161055 Score = 248 bits (274), Expect = 1e-60 Identities = 574/863 (67%), Gaps = 14/863 (2%) Strand=Plus/Minus Query 47836 ACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTT 47895 |||| |||||||| | ||||| || || || | || || |||||||| || |||| Sbjct 9903270 ACATCACTCCCATCCTCTGATACTCGCCTAC-----TATCAAAGAAATTAGTCTTCCCTT 9903216 Query 47896 CCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATC 47955 | |||| ||| ||||||| |||||||||| | | | ||| || ||||| Sbjct 9903215 CTGATGAACCATTCCCCATAAAGACAAATGGATTTTCCACTCTGAAAACCTTCTTAAAGT 9903156 Query 47956 CTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAAT 48015 | || ||| || || || ||||| |||||||| || | |||||| ||| | Sbjct 9903155 CCAACTCTAGCATGAGCCTGTCTGCCACGAATTCAATGAACTGCTTCATCCAAGTACAGT 9903096 Query 48016 TCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAG 48075 || | || || || || | || | ||||| || || | ||| ||||| || |||||| Sbjct 9903095 TCCTCCCAATGAGCTTCATGGGCAAGGCCTCAGTGAGGAGCTCCTGTTCCATCCTGACAG 9903036 Query 48076 CATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACA 48135 ||| || ||||| || |||| | | ||| ||||| | | || | || ||| Sbjct 9903035 CATTGACGATTATTTATTTTACTCTCTGCTCTGATGGTGTGTGTAGCAGGTATTCGGACA 9902976 Query 48136 TTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATG 48195 | || ||||| ||| | || | ||| || ||||| || || | ||| || ||||||| Sbjct 9902975 TCGGGCA-GCAAATTCAGAGTGTAAACCCTCGTCTCTGCTGATAAGTTCATTGGAAAATG 9902917 Query 48196 TGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAA 48255 |||| || ||||| ||| | || ||||||||||||||| || || || ||||||| Sbjct 9902916 TGAGGCCAGGCATCAGT-----TCTTATGAGCCAAAATATTGATGCAAATGAGCCAGAAA 9902862 Query 48256 AGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT 48315 |||| || || | | || || | || | | || ||| | ||||| |||| Sbjct 9902861 AGAAGATTTCTCCCGTAGTGGCCAAGACTACAACACGTTTTCTGTAGGTAGCTTCTTTGT 9902802 Query 48316 ---GTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAG 48372 |||| | || || || || |||||||| || |||||||| |||| || | Sbjct 9902801 CCCCAGTCCAACACAAGGCACAGTCTGCTTTCTTCTTCACCCAAGGCATCATTTCAATGG 9902742 Query 48373 CATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTAT 48432 || | ||||||| | | || | | || ||||| |||| | || || | |||| || Sbjct 9902741 CACTGGAGAGAAATTCCCTGTCTTAGGAATTTTTAATGTAAATGTCAATAAGGAGACCAT 9902682 Query 48433 ACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTG 48492 | ||||| || || || ||||| || || | || || || | ||||| | |||||| Sbjct 9902681 ATATTTCAGAATGTATGTTTTCCATAGCAACTTGGAAGCCACAGAAACAGCCGGCTTCTA 9902622 Query 48493 TGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAG 48552 | || || ||||| | |||||| | ||| ||| ||| || |||| ||||||| | Sbjct 9902621 TAATTTGAACCTCTTGGCTAAATCGCTGCACCAGATTTTCACTTGCTATGCCATCACGTG 9902562 Query 48553 CAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCC 48612 | |||| || |||| |||||| ||||||||| ||| | | |||| | || Sbjct 9902561 CTTCAAAGAAAGCTAGAACATGTGATATAAAATATCATTCCTCAGGCTTCAGGGCCTGCC 9902502 Query 48613 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTT 48672 || | | || || || | ||| || || || |||||||| || || ||||| |||| Sbjct 9902501 GGTGCTGACTGTCCTTGGAAAGATCCACCTCCTCCGCTGTCCAGAAGGACGCCTCGGCTT 9902442 Query 48673 TTTTATACATATTCCATATATCA 48695 | |||||||| | ||| |||||| Sbjct 9902441 TCTTATACATTTGCCAAATATCA 9902419 >seq131 Length=5549739 Score = 197 bits (218), Expect = 2e-45 Identities = 499/757 (66%), Gaps = 40/757 (5%) Strand=Plus/Minus Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894 ||||| |||||||| | |||| | || || |||| || || ||||| || ||| Sbjct 3233609 GACATCACTCCCATCCTCTGATGCTTGCCTAC-----TCTCAAACAAGTTAGTCTTCCCT 3233555 Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAAT 47954 |||| ||| |||| |||||||| |||| | |||| || | | ||| || | ||| Sbjct 3233554 TCCAGTGAATTATTCTCCATAAAGTCAA-TAGATTCTCTACTCTGAAAACCTTGTGAAAG 3233496 Query 47955 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAA 48014 | | || || || || ||| | ||| ||| || || ||||||| || Sbjct 3233495 CTCAGCTCCAGCATGAGCCTGTCTACCACGGATTTAATGTACTGCTTCATCAAAGTGCAG 3233436 Query 48015 TTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACA 48074 ||||| ||| | || || || | | ||| |||| | ||||| ||||| || | ||| Sbjct 3233435 TTCATCCCT-TGAGCTTCACAGCCAAGGCCCCCGTGAAGAACTCCTGTTCTATCCTCACA 3233377 Query 48075 GCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAAC 48134 |||| | ||||| | | || | | | ||| |||| | |||| |||||||| Sbjct 3233376 GCATTGATGATTATTGCTTTTGCTCTCTGCTCTGATGGTTTGTGTAACAGGTGTTTAAA- 3233318 Query 48135 ATTAAACATGCAAAATCACAATGAAGACC-TTCATCTCTACTAATTAATTCGTTAGAAAA 48193 ||| | || ||||| ||||| || | ||| || || ||| |||| | || || ||||| Sbjct 3233317 ATTCAGCAGGCAAAGTCACAGTGTAAACCCTTGAT-TCTGATAATAAGTTAATTGGAAAA 3233259 Query 48194 TGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGA 48253 |||||| |||| ||||||| | | ||||| ||||| Sbjct 3233258 TGTGAG--------------------------GCCAGAATATTGACACAAAAGAACCAGA 3233225 Query 48254 AAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTT 48313 |||||| || ||||| | | ||||| || || ||| ||| | || || || Sbjct 3233224 AAAGAAGATTCCTTCCGCAGTGGCAAAGGCTAAAACATGTTCTT-GTAGGTAGCCTCTTT 3233166 Query 48314 GTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTAT 48370 || ||||| | |||||||| || ||| |||| ||||||||||| |||| || Sbjct 3233165 GTTCCCAATCCAACTCAAGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCCTTTCAAT 3233106 Query 48371 AGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACT 48430 |||||| ||||||| | |||| || |||||||| |||||| || || | ||||| Sbjct 3233105 AGCATTGGAGAGAAATTCCCTTTCTTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACT 3233046 Query 48431 ATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTC 48490 ||||||| || || || ||||| | || | ||| || || || ||||| | | |||| Sbjct 3233045 CTACATTTTAGAATGCATGTTTTCTGTGGCAACCTGGAAGCCATAGAAACAGCCCACTTC 3232986 Query 48491 TGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACT 48550 ||| || || || || | |||| ||| ||||||| |||||| |||| |||||||| Sbjct 3232985 TGTAATTTGAACTTCTTGGCTAAATTATTCCACCAAATTTTCATTTGCTATGCCATCACT 3232926 Query 48551 AGCAGCAAAAAATGCTAATACATGTTTAATAAAATAT 48587 || ||||| || || | ||| | ||||||||| Sbjct 3232925 TGCTGCAAAGAAAGCCAGGACAAGCAATATAAAATAT 3232889 >seq58 Length=10378366 Score = 194 bits (214), Expect = 2e-44 Identities = 499/751 (66%), Gaps = 43/751 (6%) Strand=Plus/Plus Query 47841 ACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAAT 47900 ||||| || || ||||| ||| | || | ||||| || || ||||| || ||||||| | Sbjct 1968513 ACTCCAATCTTCTGATACTCAACTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 1968572 Query 47901 GATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAAT 47960 || ||||| ||||||| |||| |||||| || | | |||| | || | || | | Sbjct 1968573 GAAATATTCTCCATAATGTCAAGTGGATTTTCTACTCTGAAAATCTCGATAGAGCCCAGT 1968632 Query 47961 TCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATT 48020 | || || || ||||| || ||||| || | ||||||| || ||||| Sbjct 1968633 TTCAGCATAAGCCTGTCTGCTACAAATTCAATGCACTGCTTCATCAAAGAGCAGTTCATC 1968692 Query 48021 CCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCC 48080 || || || || || || | |||| || || ||||| ||||| || | ||| || Sbjct 1968693 CCAATGAGCTTCACAGGCAAGGCCTTGGTGAGGAACTCCTGTTCTATCCTAACAAAATTG 1968752 Query 48081 ACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAA 48140 | |||| | ||| | | | ||| | ||| || ||| | ||| |||||| | Sbjct 1968753 ATAATTAC---TTTTATCCTCTTCTCCCACAGTGTGTAG--CAAGTATTTGAACATTGAG 1968807 Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 || |||||||||| |||||||| ||||| | ||| || |||||||||||| Sbjct 1968808 CAGGCAAAATCAC-----------TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGA 1968856 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCC--AAAATATTGCCGCGAAAGATCCAGAAAAGA 48258 || ||||| || | | ||| || || | || |||||| || ||||| |||||||||| Sbjct 1968857 CCAGGCATCAGCCGTCATTTCTTAAGTCAGAATATATTGATGCAAAAGAACCAGAAAAGA 1968916 Query 48259 ATATGCCTTCTACGGCCGCAAATGCGGTAAGTC--TCTCTCCGTAACT-GGCTTCGTTGT 48315 | || |||| || ||||| || || || |||||| || | | ||| | Sbjct 1968917 AGATTTCTTCCACATTAGCAAAGGC--TACATCATGCTCTCCACAAATAGACTT-----T 1968969 Query 48316 GTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 48375 ||||| | | || |||| | |||||||| ||||||||||| |||| | ||| Sbjct 1968970 TTATCC----TGATTCCAAATCTGTTTTCTTCTTCACACAAGGCATCATTTCAGTGCCAT 1969025 Query 48376 TAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACA 48435 | |||| ||| | |||||| ||| || ||||| || | | || | | ||| || | Sbjct 1969026 TGAAGATAAATTCTTTTTCTTTGGAATTTTTAATGTGA----CAATAAGGAAACTGTATA 1969081 Query 48436 TTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGA 48495 || | || || || ||| | || || || || ||||| || ||||| |||||||| | Sbjct 1969082 TTACAGAATGTATTTTTCCTATGGCAATTTGGAATCCATAGAAACAGTGGGCTTCTGTAA 1969141 Query 48496 TCTGTACCTCCGTACAAAATCG-TTCAGCCAAATTCTCATTTACTATTCCATCACTAGCA 48554 | || | || | |||| | |||| |||| || |||| || ||| ||||||| | Sbjct 1969142 TTTGAATTTCTTGGCTAAATTGCTTCA-CCAATTTTTCATGTATTATGCCATCAC---CT 1969197 Query 48555 GCAAAAAATGCTAATACATGTTTAATAAAAT 48585 || |||| || | |||||| ||||||| Sbjct 1969198 GCTAAAA--GCCAGAACATGTGCTATAAAAT 1969226 >seq3 Length=41493964 Score = 140 bits (154), Expect = 5e-28 Identities = 251/360 (70%), Gaps = 19/360 (5%) Strand=Plus/Plus Query 45878 CAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCCTT 45935 |||| || ||||| ||| ||| | | |||||||| ||| | ||| ||||| | Sbjct 8287186 CAGTAGAACCAAAACCTCCTGAAC--CCCTTTCAGTGTCATTCAACACTTGAACTTCTTC 8287243 Query 45936 CAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTTAT 45995 | ||| |||||| | || |||| | | || || || ||||||| |||||| | |||| Sbjct 8287244 TATATCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCTATTCGATCACCTTTTTTTAC 8287303 Query 45996 TTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCTTC 46055 |||||| | ||||| ||| ||| | || | || ||||| | |||||||||||||| Sbjct 8287304 TTCAAACTTCTCTTTACCAAAATTAAACAACACAACACCAATATTTCCTCTATAATCTTC 8287363 Query 46056 ATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGAGC 46112 |||||| || || |||| ||||| || |||| || ||| ||||| | ||||| Sbjct 8287364 ATCTATGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCCAGGCCAGAACGTGGAGC 8287423 Query 46113 TATTCTTCCATA----ACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATC 46168 |||||||||||| ||||| || | || ||| |||| |||||||| | ||| Sbjct 8287424 TATTCTTCCATAGCACCCAGAA----GGAAGAGCTATCTGAATGTCTGTTTTCA-CAA-G 8287477 Query 46169 TCCTTTCTCC--AGGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCCTGCTGC 46226 |||||||| ||| || | |||| || || |||||||| | || || ||||| || Sbjct 8287478 GGCTTTCTCCATAGGTGGTACTATATAATCATAGGCACTGTACAGGTCGTAGCCTGCGGC 8287537 >seq299 Length=1791600 Score = 125 bits (138), Expect = 1e-23 Identities = 271/403 (67%), Gaps = 2/403 (0%) Strand=Plus/Minus Query 47870 TTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATT 47929 |||||| || ||||| ||||| ||||| || || || ||||||||||||||||| ||||| Sbjct 1083411 TTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCCATAAAATCAAAGGGATT 1083352 Query 47930 AACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTC 47989 |||| | | ||| ||| ||||| | ||| || | ||| || || | ||||| Sbjct 1083351 TTCTGCCTGAAAAACCTTTGAGAATCCAAGTTCCATAAGTAATCTTTCAGCTATAAATTC 1083292 Query 47990 TATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT 48049 ||||| |||||| |||| ||||| | || || |||||| | | || || Sbjct 1083291 AATATACTGGCTCATCAAAACACAGTTCATCCTAATGAGGCCAACTGGCAAGTCTTCTGT 1083232 Query 48050 AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTA-CCGTTTCCTCAC 48108 | |||||| || || || ||||||||| || || ||| | | || |||| || Sbjct 1083231 TAAAAACTCCTGCTCAATTTTGACAGCATTAACAATGATCTCCCTCACCCTTTTCTTCTG 1083172 Query 48109 TTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCAT 48168 | || | || | | ||||| || || ||||| ||| | |||| |||||| Sbjct 1083171 AAGTCTTATTTACTAAGTACTGAAACACTAGGCAAGCAAAGTCATAGAGAAGTTCTTCAT 1083112 Query 48169 CTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCC 48228 |||| | || | || || ||||||||||| || || || | || | || || | || Sbjct 1083111 CTCTGTTGATCAGCTCATTGGAAAATGTGAGTCCAGGGATGGGACCTCTCTTCTTTAACC 1083052 Query 48229 AAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTAC 48271 | || || | || |||||||| | ||||| || ||||| || Sbjct 1083051 AGAAAATAGTAGC-AAAGATCCTCAGAAGAAAATTCCTTCCAC 1083010 >seq64 Length=9676502 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||| | ||| || ||||||||||| || ||||| ||||| ||||| ||| Sbjct 6351545 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 6351486 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||||| || ||||| ||||||||||| || || || || || ||||| || Sbjct 6351485 AGCCAGAATATTGAAGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGGC 6351427 >seq30 Length=14751797 Score = 114 bits (126), Expect = 2e-20 Identities = 105/133 (79%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| | || Sbjct 820284 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATGGAC 820343 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || |||| || |||||||| |||||||| ||||| || || | | |||||| Sbjct 820344 TCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 820403 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 820404 TTTCTTACACCAT 820416 Score = 105 bits (116), Expect = 9e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| |||||||| | |||||||| || || Sbjct 838233 GTACCAGCATTGAAGAGAGTGGGAGAAGCATGTGTAAACCACCTCTCAGAAAGAAGGTTA 838292 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 ||||||||||| || | || ||||| || |||||| || || | ||| | ||||||| Sbjct 838293 TATGTTTCAATTGCAGCATCAATGTCTTCTTTATGAATCCCCACAGATACCCTCATCAAC 838352 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 ||||| || ||||||||| || Sbjct 838353 ATATGTTGTGGTCTTTCAGCC 838373 Score = 86.0 bits (94), Expect = 9e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 |||||||| ||||||||||| ||||||| ||||| ||||||||||| |||||||| ||| Sbjct 831386 TCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACACATCAAAGAC 831445 Query 77985 CAGTC 77989 ||||| Sbjct 831446 CAGTC 831450 >seq11673 Length=1157 Score = 102 bits (112), Expect = 1e-16 Identities = 110/144 (76%), Gaps = 4/144 (3%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| ||||||||||| |||| || | |||| ||||||| || ||||| ||||| Sbjct 215 GTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTCGGATTTGACATCACTCC 274 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 ||| | ||||| || || || | ||||| || || ||||| || ||||| | ||| || Sbjct 275 CATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCTAGTGAAAT 334 Query 47906 ATTTTCCATAAAATCAAATGGATT 47929 ||| |||||||| ||||||||||| Sbjct 335 ATTCTCCATAAAGTCAAATGGATT 358 >seq2 Length=46620681 Score = 96.9 bits (106), Expect = 5e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222 |||||||||| || || | ||| || ||||||||||| || ||||| || || | || | Sbjct 41377777 CTTCATCTCTGCTGATCAGTTCATTGGAAAATGTGAGCCCAGGCATGAGACCTCTCTTCT 41377718 Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282 | ||||| ||||| || || |||||||| || ||||| || ||||| || || ||||| | Sbjct 41377717 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGG 41377658 Query 48283 C 48283 | Sbjct 41377657 C 41377657 >seq128 Length=5608787 Score = 89.7 bits (98), Expect = 7e-13 Identities = 153/220 (70%), Gaps = 9/220 (4%) Strand=Plus/Plus Query 48339 GCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG 48398 || |||||||| | |||| |||| | || | ||| |||||||| | | |||| ||| Sbjct 5393376 GCTTTCTTCTTCATACAAAGCAT-----CAATGGTATTGAAGAGAAATTCTCTTTCTTTG 5393430 Query 48399 CTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATT 48458 |||||||| | || | || | ||||||||| |||| || || || ||| | || Sbjct 5393431 GGATCTTTAATGGAAATGTCAGGAAGGAGACTATACCTTTCAGAATGTATGTTTGCCATG 5393490 Query 48459 GCCATCTGAAATCCGTAAAAA-CATCTC---GCTTCTGTGATCTGTACCTCCGTACAAAA 48514 || || || || || || | | || | |||||||| || || ||||| | | | Sbjct 5393491 GCAATTTGGAAGCCATAGATAGCAATTGTGGGCTTCTGTAATTTGAACCTCTTGGCTAGA 5393550 Query 48515 TCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCA 48554 || ||| ||||| || ||||||||||| |||| ||| ||| Sbjct 5393551 TCCTTCTGCCAACTTTTCATTTACTATGCCATTACTTGCA 5393590 >seq152 Length=4760374 Score = 86.0 bits (94), Expect = 9e-12 Identities = 185/272 (68%), Gaps = 15/272 (6%) Strand=Plus/Minus Query 45964 ATTAGTTGAGCTATTCTATCACCCGTATTTATTTCAAATATATCTTTTCCATTATTGATC 46023 || || || |||||| |||| || | |||| |||||| | ||||| ||| ||| | Sbjct 2153696 ATGAGCTGTGCTATTTGATCATCCTTTTTTACTTCAAACTTTTCTTTGCCAAAATTAAAT 2153637 Query 46024 AGAATGACTCCAATTGTCCCTCTATAATCTTCATCTATTACTCCCCCTCCCACATCGATA 46083 | | || | || | |||||||||| || |||||| || || ||| |||||||| Sbjct 2153636 AACACAACACTAACATTTCCTCTATAATTTTTATCTATGACACCAGCTCTTACATCGATG 2153577 Query 46084 CC---TTTTAGAGACAGTCCAGATCTAGGAGCTATTCTTCCATAA----CAGAATTTGGG 46136 |||| || || |||| | ||||||| |||||||||| ||||| || Sbjct 2153576 AAGTGTTTTGCAGCCAAGCCAGGACGTGGAGCTACTCTTCCATAACACCCAGAA----GG 2153521 Query 46137 CATAGACATCCGAATATCTGTTTTAATCAATCTCCTTTCTCC--AGGAGGGATAGTATAG 46194 | || ||| ||| |||||||| | ||| |||||||| ||| || || |||| Sbjct 2153520 AAGAGCTATCTGAACGTCTGTTTTCA-CAA-GGGCTTTCTCCATAGGTGGTATTCTATAA 2153463 Query 46195 TCGTACGCACTGTATAAATCATATCCTGCTGC 46226 || || |||||||| | ||||| ||||| || Sbjct 2153462 TCATAAGCACTGTACAGGTCATAGCCTGCAGC 2153431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694560405617120