Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq536 336 3e-87
seq59 257 2e-63
seq260 235 8e-57
seq131 197 2e-45
seq58 183 4e-41
seq3 143 4e-29
seq299 120 4e-22
seq2 120 4e-22
seq30 118 2e-21
seq64 116 5e-21
>seq536
Length=337149
Score = 336 bits (372), Expect = 3e-87
Identities = 640/936 (68%), Gaps = 36/936 (4%)
Strand=Plus/Plus
Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTGT---GACATAACTCCCATTT 46339
|||||||||| |||| || | |||| ||||||| | | ||||| ||||||||||
Sbjct 201730 TTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTCCCATTT 201789
Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399
| || || || ||||| | ||||| || || |||||||| ||||| | ||| ||||| |
Sbjct 201790 TCTGATACTCGCCTACTCCCTTCTCAAAGAAGTTAGTTTTCCCTTCTAGTGAAATATTCT 201849
Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTA-ATTCTGAAATC 46458
||||||| | ||| ||||| || || |||| || ||||| || | ||| | ||
Sbjct 201850 CCATAAAGTTAAATGGATTTTCTACTTTGAAAATCTTGTTAAAGCCCAGCTTCAG-CATA 201908
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|| |||||||| || ||||| || ||| ||||||| |||||||| || || ||
Sbjct 201909 AGCCTATCTGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCAATTAGC 201968
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGAT-ATTAT 46577
|| | || | || || || || ||||| || || || ||| |||| ||| ||| |
Sbjct 201969 TTCTCAGGCAAGGCTTCTGTGAGGAACTCCTGATCTATCTTGAAGGCAT-TGATAATTGT 202027
Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
| ||||| | | ||| |||| || | || ||||| | ||| | || |||||
Sbjct 202028 TTCTTTTACTCTCTGCTCTGATGGTTTGTGAAGCAGGTGTTTGAGCATCAGGCAGGCAAA 202087
Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697
||||| || | || |||||||| ||||| | ||| || ||||||||||| ||||||||
Sbjct 202088 GTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCAT 202147
Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757
||||| || || ||||| ||||||||||| || | ||
Sbjct 202148 CAGTCCTCGTTTCTTGAG----------------------CCAGAAAAGAAGATTCTGTC 202185
Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCT 46814
| ||| || || || |||| | ||||| || | || || || | ||| || |
Sbjct 202186 CATAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAAT-CAAAT 202244
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
|| || || || || ||||| ||||||||||||||||| | ||||| ||||||||
Sbjct 202245 GCAAGGCCCAT-GGCTTTCTTCTTCACACAAGGCATTGTTTCAGTGGCATTGAAGAGAAA 202303
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
| |||| | ||||||| ||| || || || | ||||||||||||||| |||||
Sbjct 202304 TTCCCTTTCTTTGAAGTCTTTAATATAAGTGTCAATAAGAAGACTATACATTTCAGAATG 202363
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
|||||||| || || || || || || || |||| | ||||| ||||| || || ||
Sbjct 202364 TATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATTTGAACTTC 202423
Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054
| | |||| | || ||||||||| || ||||| | ||||| || ||| | || ||
Sbjct 202424 TTGGCTAAATGGCTCCACCAAATTCTCCTTTACTATGCTATCACCTGCCGCAGAGAAAGC 202483
Query 47055 CAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATC 47114
|| | || | |||||||||| ||| || | |||| | ||||| | || ||
Sbjct 202484 CAGAATGTGGAT-ATAAAATATTGTTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAATGTC 202542
Query 47115 TTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATT 47174
| || | | | || || ||||||||||| || || ||||| ||||| ||| |||| |
Sbjct 202543 CCTGGA-AGAGCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTACACATCTG 202601
Query 47175 CCATATATCACGATATTGGATCGGAAAAATAACAAA 47210
|| ||| || | | || || ||||| || || ||
Sbjct 202602 CCGGATACCATGGTGTTCCATAGGAAAGATGACCAA 202637
>seq59
Length=10161055
Score = 257 bits (284), Expect = 2e-63
Identities = 576/863 (67%), Gaps = 14/863 (2%)
Strand=Plus/Minus
Query 46325 ACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTT 46384
|||| |||||||| | || || || ||||| | || || |||||||| || ||||
Sbjct 9903270 ACATCACTCCCATCCTCTGATACTCGCCTAC-----TATCAAAGAAATTAGTCTTCCCTT 9903216
Query 46385 CCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATC 46444
| |||| ||| ||||||| |||| ||||| || | ||| || |||||
Sbjct 9903215 CTGATGAACCATTCCCCATAAAGACAAATGGATTTTCCACTCTGAAAACCTTCTTAAAGT 9903156
Query 46445 CTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAAT 46504
| || ||| || || || ||||| |||||||| || || |||||| ||| |
Sbjct 9903155 CCAACTCTAGCATGAGCCTGTCTGCCACGAATTCAATGAACTGCTTCATCCAAGTACAGT 9903096
Query 46505 TCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAG 46564
|| | || ||||| || | || | ||||| || || | ||| ||||| || ||||||
Sbjct 9903095 TCCTCCCAATGAGCTTCATGGGCAAGGCCTCAGTGAGGAGCTCCTGTTCCATCCTGACAG 9903036
Query 46565 CATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACA 46624
||| ||||| || ||||| | | ||| ||||| || | || | || |||
Sbjct 9903035 CATTGACGATTATTTATTTTACTCTCTGCTCTGATGGTGTGTGTAGCAGGTATTCGGACA 9902976
Query 46625 TTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATG 46684
| || ||||| ||| | || | || || ||||| || || | ||| || |||||||
Sbjct 9902975 TCGGGCA-GCAAATTCAGAGTGTAAACCCTCGTCTCTGCTGATAAGTTCATTGGAAAATG 9902917
Query 46685 TGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAA 46744
|||| |||||||| ||| | || ||||||||||||| | || || || |||||||
Sbjct 9902916 TGAGGCCAGGCATCAGTTC-----TTATGAGCCAAAATATTGATGCAAATGAGCCAGAAA 9902862
Query 46745 AGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT 46804
|||| || || | || || || | |||| | | || ||| | || || || |
Sbjct 9902861 AGAAGATTTCTCCCGTAGTGGCCAAGACTACAACACGTTTTCTGTAGGTAGCTTCTTTGT 9902802
Query 46805 G---AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAG 46861
| |||| | || || || || || ||||| || |||||||| |||| || |
Sbjct 9902801 CCCCAGTCCAACACAAGGCACAGTCTGCTTTCTTCTTCACCCAAGGCATCATTTCAATGG 9902742
Query 46862 CATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTAT 46921
|| | ||||||| | | || | || ||||| || | || || | |||| ||
Sbjct 9902741 CACTGGAGAGAAATTCCCTGTCTTAGGAATTTTTAATGTAAATGTCAATAAGGAGACCAT 9902682
Query 46922 ACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAG 46981
| ||||| ||||| |||||||| ||||| | || || || | ||||| | |||||
Sbjct 9902681 ATATTTCAGAATGTATGTTTTCCATAGCAACTTGGAAGCCACAGAAACAGCCGGCTTCTA 9902622
Query 46982 TAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAG 47041
|||| || |||||| | |||||| | || ||| ||| | |||| ||||||| |
Sbjct 9902621 TAATTTGAACCTCTTGGCTAAATCGCTGCACCAGATTTTCACTTGCTATGCCATCACGTG 9902562
Query 47042 CAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCC 47101
| |||| || || | |||||| ||||||||| ||| || | |||| | ||
Sbjct 9902561 CTTCAAAGAAAGCTAGAACATGTGATATAAAATATCATTCCTCAGGCTTCAGGGCCTGCC 9902502
Query 47102 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTT 47161
|| | | || || || | ||| || || || ||||||||||| |||||||| ||||
Sbjct 9902501 GGTGCTGACTGTCCTTGGAAAGATCCACCTCCTCCGCTGTCCAGAAGGACGCCTCGGCTT 9902442
Query 47162 TTTTATACATATTCCATATATCA 47184
| |||||||| | ||| ||||||
Sbjct 9902441 TCTTATACATTTGCCAAATATCA 9902419
>seq260
Length=2306558
Score = 235 bits (260), Expect = 8e-57
Identities = 620/936 (66%), Gaps = 18/936 (2%)
Strand=Plus/Plus
Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 46339
|||| ||||| |||| || | ||||| ||| || | | |||||| ||||||
Sbjct 2179935 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCCCTGTTGGATTTGACATCTCTCCCACCC 2179994
Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399
| || || |||||||| ||||| || || ||| | ||| |||||| | | ||||| |
Sbjct 2179995 TCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCCATTAA-ATATTCT 2180053
Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459
||||||| ||||| | ||| || | ||| || |||| || | | || |
Sbjct 2180054 CCATAAAGTCAAATGAATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCTTCATCATAA 2180113
Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTT 46519
|| | ||| |||||||| |||||| ||||||| || || || || ||| |
Sbjct 2180114 ACCTGTGTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTTATCCCAGTGAACT 2180173
Query 46520 TGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATAT-TATC 46578
| || || | ||||||| | | ||||| ||||| | ||||||||| |||| |||
Sbjct 2180174 TCACAGGCAAAGCCTCCATGATGAACTCCTGTTCTAAGCTGACAGCATT-GATAAATATT 2180232
Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638
| ||||| | | ||| |||| || | || ||||| ||||| | || ||| |
Sbjct 2180233 TCTTTTACTCTCTGCTCCAATGGTTTGTGTAGCAGGTGTTTGAACATCAGGCAAGCAGAG 2180292
Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698
||| || | | || |||||||| ||||| | ||| | |||| | || ||||||||
Sbjct 2180293 TCATAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAACTT--AGGCCAGGCATC 2180350
Query 46699 AGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCT 46758
| ||| | || |||| | | ||||| | | ||||| || | ||||| | |||||
Sbjct 2180351 AATCCCTGTTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAGAAGTTTCCTTCC 2180410
Query 46759 ACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCTT 46815
|||||| | || || |||| | |||| ||| | || || || | |||||| |
Sbjct 2180411 ACAGCCACAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCCCCAATCCAA-TG 2180469
Query 46816 TGAGCCC-AATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
|| || ||| || |||||||||||| ||||||||||||| || ||||| ||||||||
Sbjct 2180470 CAAGACCTAATTTGCTTTTTTCTTTACATAAGGCATTGTTTCAATGGCATTGAAGAGAAA 2180529
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
| |||| | |||||| || || || || | |||||||||||||| ||||
Sbjct 2180530 TTCCCTTTCTTTGAAATCTTT----TAAGTGTCAATAAGGAGACTATACATTTCACAATG 2180585
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
| ||||| || || || || || | || ||||| |||| ||||| || || ||
Sbjct 2180586 TA-GTTTTTCATGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTAATTTGAACTTC 2180644
Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054
| |||| || |||||| ||||| ||||| |||||||| || ||||| ||
Sbjct 2180645 CTGGCTTAATCACTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAATT 2180704
Query 47055 CAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATC 47114
|| | ||| ||||||||| ||| || | |||| | | ||| || ||
Sbjct 2180705 CATAATATGAGACATAAAATATCATTCCTCAGATTTCAGGGCTTCCTAGTGCAGAATGTC 2180764
Query 47115 TTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATT 47174
|| || ||| | || || || |||| | || || | || || || ||| | || |
Sbjct 2180765 CTTGGAAATAGCCACCTCCCCATATGTCAAAAAGGAACCTTCAGCCTTCTTAGAAATCTG 2180824
Query 47175 CCATATATCACGATATTGGATCGGAAAAATAACAAA 47210
||| |||||| | ||| ||| ||||| | |||||
Sbjct 2180825 CCAAATATCATGGTATCTGATAGGAAAGAAGACAAA 2180860
>seq131
Length=5549739
Score = 197 bits (218), Expect = 2e-45
Identities = 506/766 (66%), Gaps = 42/766 (5%)
Strand=Plus/Minus
Query 46324 GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCT 46383
||||| |||||||| | || | | ||||| |||| || || ||||| || |||
Sbjct 3233609 GACATCACTCCCATCCTCTGATGCTTGCCTAC-----TCTCAAACAAGTTAGTCTTCCCT 3233555
Query 46384 TCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAAT 46443
|||| ||| |||| |||||||| |||| | ||| || | ||| || | |||
Sbjct 3233554 TCCAGTGAATTATTCTCCATAAAGTCAATAG-ATTCTCTACTCTGAAAACCTTGTGAAAG 3233496
Query 46444 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAA 46503
| | || || || || ||| | ||| ||| || ||| ||||||| ||
Sbjct 3233495 CTCAGCTCCAGCATGAGCCTGTCTACCACGGATTTAATGTACTGCTTCATCAAAGTGCAG 3233436
Query 46504 TTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACA 46563
||||| ||| |||| || || | | ||| |||| | ||||| ||||| || | |||
Sbjct 3233435 TTCATCCCT-TGAGCTTCACAGCCAAGGCCCCCGTGAAGAACTCCTGTTCTATCCTCACA 3233377
Query 46564 GCATCCGAT-ATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAA 46622
|||| ||| ||||| | | || || | | ||| |||| || | || ||||||||
Sbjct 3233376 GCATT-GATGATTATTGCTTTTGCTCTCTGCTCTGATGGTTTGTGTAACAGGTGTTTAAA 3233318
Query 46623 CATTAAACATGCAAAATCACAATG-AAGGCCTTCATCTCTACTAATTAATTCGTTAGAAA 46681
||| | || ||||| ||||| || || |||| || ||| |||| | || || ||||
Sbjct 3233317 -ATTCAGCAGGCAAAGTCACAGTGTAAACCCTTGAT-TCTGATAATAAGTTAATTGGAAA 3233260
Query 46682 ATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAG 46741
||||||| |||| ||||| | | | ||||| ||||
Sbjct 3233259 ATGTGAGGCCAG--------------------------AATATTGACACAAAAGAACCAG 3233226
Query 46742 AAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCAT 46801
||||||| || ||||| ||| || || || | || ||| ||| | || || |
Sbjct 3233225 AAAAGAAGATTCCTTCCGCAGTGGCAAAGGCTAAAACATGTTCTT-GTAGGTAGCCTCTT 3233167
Query 46802 TATG---AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTA 46858
| | |||||| || |||||||| || || |||| ||||||||||| |||| |
Sbjct 3233166 TGTTCCCAATCCAACTCAAGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCCTTTCAA 3233107
Query 46859 TAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGAC 46918
||||||| ||||||| | |||| | | |||||||| || || || || | ||||
Sbjct 3233106 TAGCATTGGAGAGAAATTCCCTTTCTTTAGAATCTTTAATGTAAGTGTCAATAAGGAGAC 3233047
Query 46919 TATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTT 46978
| ||||||| ||||| |||||||| | || | ||| || || || ||||| | |||
Sbjct 3233046 TCTACATTTTAGAATGCATGTTTTCTGTGGCAACCTGGAAGCCATAGAAACAGCCCACTT 3232987
Query 46979 CAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCAC 47038
| ||||| || || ||| | |||| ||| |||||| ||||| |||| |||||||
Sbjct 3232986 CTGTAATTTGAACTTCTTGGCTAAATTATTCCACCAAATTTTCATTTGCTATGCCATCAC 3232927
Query 47039 TAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATC 47084
| || ||||| || |||| ||| | ||||||||| ||| ||
Sbjct 3232926 TTGCTGCAAAGAAAGCCAGGACAAGCAATATAAAATATCGTTCCTC 3232881
>seq58
Length=10378366
Score = 183 bits (202), Expect = 4e-41
Identities = 494/748 (66%), Gaps = 37/748 (5%)
Strand=Plus/Plus
Query 46330 ACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAAT 46389
||||| || || || || ||| |||| | ||||| || || ||||| || ||||||| |
Sbjct 1968513 ACTCCAATCTTCTGATACTCAACTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 1968572
Query 46390 GATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAAT 46449
|| ||||| ||||||| |||| ||||| || | |||| | || | || | |
Sbjct 1968573 GAAATATTCTCCATAATGTCAAGTGGATTTTCTACTCTGAAAATCTCGATAGAGCCCAGT 1968632
Query 46450 TCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATT 46509
| || || || ||||| || ||||| || || ||||||| || |||||
Sbjct 1968633 TTCAGCATAAGCCTGTCTGCTACAAATTCAATGCACTGCTTCATCAAAGAGCAGTTCATC 1968692
Query 46510 CCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCC 46569
|| ||||| || || || | |||| || || ||||| ||||| || | ||| ||
Sbjct 1968693 CCAATGAGCTTCACAGGCAAGGCCTTGGTGAGGAACTCCTGTTCTATCCTAACAAAATT- 1968751
Query 46570 GATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAA 46629
|||| | | | | || || | ||| ||| || | ||| | ||| |||||| |
Sbjct 1968752 GATAATTACTTTTATCCTCTTCTCCCACA--GTG--TGTAGCAAGTATTTGAACATTGAG 1968807
Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689
|| |||||||||| |||||||| ||||| | ||| || |||||||||||
Sbjct 1968808 CAGGCAAAATCAC-----------TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGA 1968856
Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATA--GCCGCGAAAGATCCAGAAAAGA 46747
|||||||| || | | || || || || |||||| | || ||||| ||||||||||
Sbjct 1968857 CCAGGCATCAGCCGTCATTTCTTAAGTCAGAATATATTGATGCAAAAGAACCAGAAAAGA 1968916
Query 46748 ATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAA 46807
| || |||| ||| || || || ||| |||||| || | | | | | |
Sbjct 1968917 AGATTTCTTCCACATTAGCAAAGGCTACATCATGCTCTCCACAAATAG----ACTTTTTA 1968972
Query 46808 TCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 46867
||| || || |||| | || ||||| ||||||||||| |||| | |||| |
Sbjct 1968973 TCCTGATT----CCAAATCTGTTTTCTTCTTCACACAAGGCATCATTTCAGTGCCATTGA 1969028
Query 46868 AGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTT 46927
||| ||| | |||||| | || |||| |||| | || | | ||| || |||
Sbjct 1969029 AGATAAATTCTTTTTCTTTGGAATTTTTA----ATGTGACAATAAGGAAACTGTATATTA 1969084
Query 46928 CTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCT 46987
| ||||| || ||| | || || || || ||||| || ||||| ||||| ||||| |
Sbjct 1969085 CAGAATGTATTTTTCCTATGGCAATTTGGAATCCATAGAAACAGTGGGCTTCTGTAATTT 1969144
Query 46988 GTACCTCTGTACAAAATCG-TTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046
| | ||| | |||| | |||| ||| || |||| | ||| ||||||| | ||
Sbjct 1969145 GAATTTCTTGGCTAAATTGCTTCA-CCAATTTTTCATGTATTATGCCATCAC---CTGCT 1969200
Query 47047 AAAAATGCCAATACATGTTTAATAAAAT 47074
|||| |||| |||||| |||||||
Sbjct 1969201 AAAA--GCCAGAACATGTGCTATAAAAT 1969226
>seq3
Length=41493964
Score = 143 bits (158), Expect = 4e-29
Identities = 222/312 (71%), Gaps = 15/312 (5%)
Strand=Plus/Plus
Query 44411 TTGTACTTCCTCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATC 44470
||| ||||| |||| ||| |||||| | || |||| | | || || || ||||||| |||
Sbjct 8287232 TTGAACTTCTTCTATATCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCTATTCGATC 8287291
Query 44471 ACCTGTATTTATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCCAATGTTCCC 44530
|||| | |||| || ||| | ||||| ||| ||| | ||| | || ||||| || ||
Sbjct 8287292 ACCTTTTTTTACTTCAAACTTCTCTTTACCAAAATTAAACAACACAACACCAATATTTCC 8287351
Query 44531 CCTATAATCTTCATCTATTACTCCACCTCCCACATCAAT---ACCTTTTAGAGAAAGACC 44587
||||||||||||||||| || ||| |||| ||||| || |||| || || ||
Sbjct 8287352 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCCAGGCC 8287411
Query 44588 CGATCTAGGCGCTATTCTTCCATA----ACAGAATTTTGGCATAGACATACGAATATCTG 44643
|| | || |||||||||||||| ||||| || | || || |||| ||||
Sbjct 8287412 AGAACGTGGAGCTATTCTTCCATAGCACCCAGAA----GGAAGAGCTATCTGAATGTCTG 8287467
Query 44644 TTTTAATCAACCGTCTTTCTCC--AGGAGGGATAGTATAATCGTAAGCACTGTATAAATC 44701
|||| | ||| | |||||||| ||| || | ||||||| || |||||||| | ||
Sbjct 8287468 TTTTCA-CAA-GGGCTTTCTCCATAGGTGGTACTATATAATCATAGGCACTGTACAGGTC 8287525
Query 44702 ATATCCTGCCGC 44713
|| ||||| ||
Sbjct 8287526 GTAGCCTGCGGC 8287537
>seq299
Length=1791600
Score = 120 bits (132), Expect = 4e-22
Identities = 271/405 (67%), Gaps = 2/405 (0%)
Strand=Plus/Minus
Query 46359 TTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATT 46418
|||||| || ||||| ||||| ||||| || || || ||||||||||||||||| |||||
Sbjct 1083411 TTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCCATAAAATCAAAGGGATT 1083352
Query 46419 AGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTC 46478
| | | ||| ||| ||||| | ||| || | ||| || || | |||||
Sbjct 1083351 TTCTGCCTGAAAAACCTTTGAGAATCCAAGTTCCATAAGTAATCTTTCAGCTATAAATTC 1083292
Query 46479 TATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGT 46538
|||||| |||||| |||| ||||| | ||||| || || | | || ||
Sbjct 1083291 AATATACTGGCTCATCAAAACACAGTTCATCCTAATGAGGCCAACTGGCAAGTCTTCTGT 1083232
Query 46539 AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGTTA-CTGTTTCCTCAC 46597
| |||||| || ||||| ||||||||| || ||| | | | |||| ||
Sbjct 1083231 TAAAAACTCCTGCTCAATTTTGACAGCATTAACAATGATCTCCCTCACCCTTTTCTTCTG 1083172
Query 46598 TTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCAT 46657
| || | || | | ||||| || || ||||| ||| | |||| ||||||
Sbjct 1083171 AAGTCTTATTTACTAAGTACTGAAACACTAGGCAAGCAAAGTCATAGAGAAGTTCTTCAT 1083112
Query 46658 CTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCC 46717
|||| | || | || || ||||||||||| ||||| || | || | ||| || | ||
Sbjct 1083111 CTCTGTTGATCAGCTCATTGGAAAATGTGAGTCCAGGGATGGGACCTCTCTTCTTTAACC 1083052
Query 46718 AAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAG 46762
| || |||| || |||||||| | ||||| || ||||| ||||
Sbjct 1083051 AGAAAATAGTAGC-AAAGATCCTCAGAAGAAAATTCCTTCCACAG 1083008
Score = 98.7 bits (108), Expect = 1e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 47070 AAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTAC 47129
|||||| || ||||| | | || || ||| ||| | || ||| ||||||| || ||
Sbjct 1082285 AAAATAATTCTCATCTGATTTAAGCTTGTTCTAGTGAAGGAGATCCTTTGATAAGTCAAC 1082226
Query 47130 TTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATA 47189
||||| ||||||||||| || |||| ||| | || |||||| ||||| |||||| | ||
Sbjct 1082225 CTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTCATACATTTTCCAAATATCAGGGTA 1082166
Query 47190 TTGGATCGGAAAAATAACAAAT 47211
|| || ||||| || ||||||
Sbjct 1082165 CTGAATTGGAAATATGACAAAT 1082144
>seq2
Length=46620681
Score = 120 bits (132), Expect = 4e-22
Identities = 108/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711
|||||||||| || || | ||| || |||||||||||||||||||| || || | ||| |
Sbjct 41377777 CTTCATCTCTGCTGATCAGTTCATTGGAAAATGTGAGCCCAGGCATGAGACCTCTCTTCT 41377718
Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771
| ||||| |||||||| || |||||||| || ||||| || ||||| ||||| || || |
Sbjct 41377717 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGG 41377658
Query 46772 CGACAAGTCTCTCTCC 46787
| || | ||| || ||
Sbjct 41377657 CCACCACTCTTTCCCC 41377642
Score = 93.3 bits (102), Expect = 6e-14
Identities = 72/86 (84%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186
||| ||||| ||||||||||| || |||| ||| | ||||||||| ||||| |||||| |
Sbjct 41366934 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCAGG 41366875
Query 47187 ATATTGGATCGGAAAAATAACAAATC 47212
|| ||||| |||||||| |||||||
Sbjct 41366874 GTACTGGATTGGAAAAATGACAAATC 41366849
>seq30
Length=14751797
Score = 118 bits (130), Expect = 2e-21
Identities = 106/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781
||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| | ||
Sbjct 820284 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATGGAC 820343
Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841
||||| || |||| || ||||||||||||||||| ||||| || || | | ||||||
Sbjct 820344 TCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 820403
Query 75842 TTTCTGAGACCAT 75854
||||| | |||||
Sbjct 820404 TTTCTTACACCAT 820416
Score = 111 bits (122), Expect = 2e-19
Identities = 124/166 (75%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398
|| |||| ||| |||||||| ||||| | || || || || ||||| || || | ||
Sbjct 843147 CTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATTCTTGCTGCCAAGATG 843206
Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458
||||||||||| || | ||||| |||| || ||| |||| || || | |||||||| |
Sbjct 843207 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAGAGTATCTAGT 843266
Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504
|| | || |||||||| | |||| ||||| || ||||||||||
Sbjct 843267 TCCACTGTGGTAACTCCACTGTATAAGCCTTGGATTACTTTCATGG 843312
Score = 102 bits (112), Expect = 1e-16
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009
|| || | ||| ||||| || | || | || | ||||| || || || || || |
Sbjct 825642 GAACCCTCATAGGTTTCATATGGGCCATGCTCCTTTGCTAGGTCACAGCTGGCTTCCAGG 825701
Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACTATC 76068
|| || |||||||| ||||| || |||| |||||| || | || | || || |||| ||
Sbjct 825702 GCTCCATAATAAATAGTTTCAAAGATCTGCTTATTCAATAACTGG-GCCTCTGGACTCTC 825760
Query 76069 AAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGG 76128
||||||||| | || ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct 825761 AAAAGGATATCTCATCAGGATAAAAGCATCTGCCAGACCCTGAACCCCAATTCCAATAGG 825820
Query 76129 TCTATGTCTCTTATTGGA 76146
| ||| | ||||| ||
Sbjct 825821 GCGATGGCGTTTATTTGA 825838
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 76598 ACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGT 76657
||||||||||| |||||||| || ||||| ||||||| || ||||| | || || |
Sbjct 832091 ACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCGCTGC 832150
Query 76658 TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGT 76717
|| || |||||||| ||||| || | ||| |||||||| | || || ||||||| |||
Sbjct 832151 TCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGT 832210
Query 76718 TCTAGATATATCGC 76731
|| || || || ||
Sbjct 832211 TCCAGGTAAATAGC 832224
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 76510 ATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACA 76569
||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| |||||
Sbjct 831376 ATATAACTTCTCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACA 831435
Query 76570 CATCAATGACCACTC 76584
|||||| ||||| ||
Sbjct 831436 CATCAAAGACCAGTC 831450
Score = 89.7 bits (98), Expect = 7e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053
|| || ||||| || | || ||||| ||||| || ||||| | |||||||| || ||
Sbjct 838233 GTACCAGCATTGAAGAGAGTGGGAGAAGCATGTGTAAACCACCTCTCAGAAAGAAGGTTA 838292
Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113
||||||||||| | || || || || || |||||| || |||| || | |||||||
Sbjct 838293 TATGTTTCAATTGCAGCATCAATGTCTTCTTTATGAATCCCCACAGATACCCTCATCAAC 838352
Query 77114 ATATGCTGAGGTCGTTC 77130
||||| || |||| |||
Sbjct 838353 ATATGTTGTGGTCTTTC 838369
>seq64
Length=9676502
Score = 116 bits (128), Expect = 5e-21
Identities = 100/124 (81%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| ||||| | ||| || ||||||||||| |||||||| ||||| || || |||
Sbjct 6351545 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 6351486
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
||||| ||||| | || ||||| ||||||||||| || || || ||||| || || ||
Sbjct 6351485 AGCCAGAATATTGAAGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGGCT 6351426
Query 46774 ACAA 46777
||||
Sbjct 6351425 ACAA 6351422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712823155498560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |