Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq536 336 3e-87 seq59 257 2e-63 seq260 235 8e-57 seq131 197 2e-45 seq58 183 4e-41 seq3 143 4e-29 seq299 120 4e-22 seq2 120 4e-22 seq30 118 2e-21 seq64 116 5e-21 >seq536 Length=337149 Score = 336 bits (372), Expect = 3e-87 Identities = 640/936 (68%), Gaps = 36/936 (4%) Strand=Plus/Plus Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTGT---GACATAACTCCCATTT 46339 |||||||||| |||| || | |||| ||||||| | | ||||| |||||||||| Sbjct 201730 TTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTCCCATTT 201789 Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399 | || || || ||||| | ||||| || || |||||||| ||||| | ||| ||||| | Sbjct 201790 TCTGATACTCGCCTACTCCCTTCTCAAAGAAGTTAGTTTTCCCTTCTAGTGAAATATTCT 201849 Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTA-ATTCTGAAATC 46458 ||||||| | ||| ||||| || || |||| || ||||| || | ||| | || Sbjct 201850 CCATAAAGTTAAATGGATTTTCTACTTTGAAAATCTTGTTAAAGCCCAGCTTCAG-CATA 201908 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || |||||||| || ||||| || ||| ||||||| |||||||| || || || Sbjct 201909 AGCCTATCTGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCAATTAGC 201968 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGAT-ATTAT 46577 || | || | || || || || ||||| || || || ||| |||| ||| ||| | Sbjct 201969 TTCTCAGGCAAGGCTTCTGTGAGGAACTCCTGATCTATCTTGAAGGCAT-TGATAATTGT 202027 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | ||||| | | ||| |||| || | || ||||| | ||| | || ||||| Sbjct 202028 TTCTTTTACTCTCTGCTCTGATGGTTTGTGAAGCAGGTGTTTGAGCATCAGGCAGGCAAA 202087 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 ||||| || | || |||||||| ||||| | ||| || ||||||||||| |||||||| Sbjct 202088 GTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCAT 202147 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 ||||| || || ||||| ||||||||||| || | || Sbjct 202148 CAGTCCTCGTTTCTTGAG----------------------CCAGAAAAGAAGATTCTGTC 202185 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCT 46814 | ||| || || || |||| | ||||| || | || || || | ||| || | Sbjct 202186 CATAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAAT-CAAAT 202244 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 || || || || || ||||| ||||||||||||||||| | ||||| |||||||| Sbjct 202245 GCAAGGCCCAT-GGCTTTCTTCTTCACACAAGGCATTGTTTCAGTGGCATTGAAGAGAAA 202303 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 | |||| | ||||||| ||| || || || | ||||||||||||||| ||||| Sbjct 202304 TTCCCTTTCTTTGAAGTCTTTAATATAAGTGTCAATAAGAAGACTATACATTTCAGAATG 202363 Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994 |||||||| || || || || || || || |||| | ||||| ||||| || || || Sbjct 202364 TATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATTTGAACTTC 202423 Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 | | |||| | || ||||||||| || ||||| | ||||| || ||| | || || Sbjct 202424 TTGGCTAAATGGCTCCACCAAATTCTCCTTTACTATGCTATCACCTGCCGCAGAGAAAGC 202483 Query 47055 CAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATC 47114 || | || | |||||||||| ||| || | |||| | ||||| | || || Sbjct 202484 CAGAATGTGGAT-ATAAAATATTGTTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAATGTC 202542 Query 47115 TTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATT 47174 | || | | | || || ||||||||||| || || ||||| ||||| ||| |||| | Sbjct 202543 CCTGGA-AGAGCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTACACATCTG 202601 Query 47175 CCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 || ||| || | | || || ||||| || || || Sbjct 202602 CCGGATACCATGGTGTTCCATAGGAAAGATGACCAA 202637 >seq59 Length=10161055 Score = 257 bits (284), Expect = 2e-63 Identities = 576/863 (67%), Gaps = 14/863 (2%) Strand=Plus/Minus Query 46325 ACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTT 46384 |||| |||||||| | || || || ||||| | || || |||||||| || |||| Sbjct 9903270 ACATCACTCCCATCCTCTGATACTCGCCTAC-----TATCAAAGAAATTAGTCTTCCCTT 9903216 Query 46385 CCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATC 46444 | |||| ||| ||||||| |||| ||||| || | ||| || ||||| Sbjct 9903215 CTGATGAACCATTCCCCATAAAGACAAATGGATTTTCCACTCTGAAAACCTTCTTAAAGT 9903156 Query 46445 CTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAAT 46504 | || ||| || || || ||||| |||||||| || || |||||| ||| | Sbjct 9903155 CCAACTCTAGCATGAGCCTGTCTGCCACGAATTCAATGAACTGCTTCATCCAAGTACAGT 9903096 Query 46505 TCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAG 46564 || | || ||||| || | || | ||||| || || | ||| ||||| || |||||| Sbjct 9903095 TCCTCCCAATGAGCTTCATGGGCAAGGCCTCAGTGAGGAGCTCCTGTTCCATCCTGACAG 9903036 Query 46565 CATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACA 46624 ||| ||||| || ||||| | | ||| ||||| || | || | || ||| Sbjct 9903035 CATTGACGATTATTTATTTTACTCTCTGCTCTGATGGTGTGTGTAGCAGGTATTCGGACA 9902976 Query 46625 TTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATG 46684 | || ||||| ||| | || | || || ||||| || || | ||| || ||||||| Sbjct 9902975 TCGGGCA-GCAAATTCAGAGTGTAAACCCTCGTCTCTGCTGATAAGTTCATTGGAAAATG 9902917 Query 46685 TGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAA 46744 |||| |||||||| ||| | || ||||||||||||| | || || || ||||||| Sbjct 9902916 TGAGGCCAGGCATCAGTTC-----TTATGAGCCAAAATATTGATGCAAATGAGCCAGAAA 9902862 Query 46745 AGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT 46804 |||| || || | || || || | |||| | | || ||| | || || || | Sbjct 9902861 AGAAGATTTCTCCCGTAGTGGCCAAGACTACAACACGTTTTCTGTAGGTAGCTTCTTTGT 9902802 Query 46805 G---AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAG 46861 | |||| | || || || || || ||||| || |||||||| |||| || | Sbjct 9902801 CCCCAGTCCAACACAAGGCACAGTCTGCTTTCTTCTTCACCCAAGGCATCATTTCAATGG 9902742 Query 46862 CATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTAT 46921 || | ||||||| | | || | || ||||| || | || || | |||| || Sbjct 9902741 CACTGGAGAGAAATTCCCTGTCTTAGGAATTTTTAATGTAAATGTCAATAAGGAGACCAT 9902682 Query 46922 ACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAG 46981 | ||||| ||||| |||||||| ||||| | || || || | ||||| | ||||| Sbjct 9902681 ATATTTCAGAATGTATGTTTTCCATAGCAACTTGGAAGCCACAGAAACAGCCGGCTTCTA 9902622 Query 46982 TAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAG 47041 |||| || |||||| | |||||| | || ||| ||| | |||| ||||||| | Sbjct 9902621 TAATTTGAACCTCTTGGCTAAATCGCTGCACCAGATTTTCACTTGCTATGCCATCACGTG 9902562 Query 47042 CAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCC 47101 | |||| || || | |||||| ||||||||| ||| || | |||| | || Sbjct 9902561 CTTCAAAGAAAGCTAGAACATGTGATATAAAATATCATTCCTCAGGCTTCAGGGCCTGCC 9902502 Query 47102 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTT 47161 || | | || || || | ||| || || || ||||||||||| |||||||| |||| Sbjct 9902501 GGTGCTGACTGTCCTTGGAAAGATCCACCTCCTCCGCTGTCCAGAAGGACGCCTCGGCTT 9902442 Query 47162 TTTTATACATATTCCATATATCA 47184 | |||||||| | ||| |||||| Sbjct 9902441 TCTTATACATTTGCCAAATATCA 9902419 >seq260 Length=2306558 Score = 235 bits (260), Expect = 8e-57 Identities = 620/936 (66%), Gaps = 18/936 (2%) Strand=Plus/Plus Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 46339 |||| ||||| |||| || | ||||| ||| || | | |||||| |||||| Sbjct 2179935 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCCCTGTTGGATTTGACATCTCTCCCACCC 2179994 Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399 | || || |||||||| ||||| || || ||| | ||| |||||| | | ||||| | Sbjct 2179995 TCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCCATTAA-ATATTCT 2180053 Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459 ||||||| ||||| | ||| || | ||| || |||| || | | || | Sbjct 2180054 CCATAAAGTCAAATGAATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCTTCATCATAA 2180113 Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTT 46519 || | ||| |||||||| |||||| ||||||| || || || || ||| | Sbjct 2180114 ACCTGTGTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTTATCCCAGTGAACT 2180173 Query 46520 TGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATAT-TATC 46578 | || || | ||||||| | | ||||| ||||| | ||||||||| |||| ||| Sbjct 2180174 TCACAGGCAAAGCCTCCATGATGAACTCCTGTTCTAAGCTGACAGCATT-GATAAATATT 2180232 Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638 | ||||| | | ||| |||| || | || ||||| ||||| | || ||| | Sbjct 2180233 TCTTTTACTCTCTGCTCCAATGGTTTGTGTAGCAGGTGTTTGAACATCAGGCAAGCAGAG 2180292 Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698 ||| || | | || |||||||| ||||| | ||| | |||| | || |||||||| Sbjct 2180293 TCATAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAACTT--AGGCCAGGCATC 2180350 Query 46699 AGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCT 46758 | ||| | || |||| | | ||||| | | ||||| || | ||||| | ||||| Sbjct 2180351 AATCCCTGTTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAGAAGTTTCCTTCC 2180410 Query 46759 ACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCTT 46815 |||||| | || || |||| | |||| ||| | || || || | |||||| | Sbjct 2180411 ACAGCCACAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCCCCAATCCAA-TG 2180469 Query 46816 TGAGCCC-AATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 || || ||| || |||||||||||| ||||||||||||| || ||||| |||||||| Sbjct 2180470 CAAGACCTAATTTGCTTTTTTCTTTACATAAGGCATTGTTTCAATGGCATTGAAGAGAAA 2180529 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 | |||| | |||||| || || || || | |||||||||||||| |||| Sbjct 2180530 TTCCCTTTCTTTGAAATCTTT----TAAGTGTCAATAAGGAGACTATACATTTCACAATG 2180585 Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994 | ||||| || || || || || | || ||||| |||| ||||| || || || Sbjct 2180586 TA-GTTTTTCATGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTAATTTGAACTTC 2180644 Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 | |||| || |||||| ||||| ||||| |||||||| || ||||| || Sbjct 2180645 CTGGCTTAATCACTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAATT 2180704 Query 47055 CAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATC 47114 || | ||| ||||||||| ||| || | |||| | | ||| || || Sbjct 2180705 CATAATATGAGACATAAAATATCATTCCTCAGATTTCAGGGCTTCCTAGTGCAGAATGTC 2180764 Query 47115 TTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATT 47174 || || ||| | || || || |||| | || || | || || || ||| | || | Sbjct 2180765 CTTGGAAATAGCCACCTCCCCATATGTCAAAAAGGAACCTTCAGCCTTCTTAGAAATCTG 2180824 Query 47175 CCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 ||| |||||| | ||| ||| ||||| | ||||| Sbjct 2180825 CCAAATATCATGGTATCTGATAGGAAAGAAGACAAA 2180860 >seq131 Length=5549739 Score = 197 bits (218), Expect = 2e-45 Identities = 506/766 (66%), Gaps = 42/766 (5%) Strand=Plus/Minus Query 46324 GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCT 46383 ||||| |||||||| | || | | ||||| |||| || || ||||| || ||| Sbjct 3233609 GACATCACTCCCATCCTCTGATGCTTGCCTAC-----TCTCAAACAAGTTAGTCTTCCCT 3233555 Query 46384 TCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAAT 46443 |||| ||| |||| |||||||| |||| | ||| || | ||| || | ||| Sbjct 3233554 TCCAGTGAATTATTCTCCATAAAGTCAATAG-ATTCTCTACTCTGAAAACCTTGTGAAAG 3233496 Query 46444 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAA 46503 | | || || || || ||| | ||| ||| || ||| ||||||| || Sbjct 3233495 CTCAGCTCCAGCATGAGCCTGTCTACCACGGATTTAATGTACTGCTTCATCAAAGTGCAG 3233436 Query 46504 TTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACA 46563 ||||| ||| |||| || || | | ||| |||| | ||||| ||||| || | ||| Sbjct 3233435 TTCATCCCT-TGAGCTTCACAGCCAAGGCCCCCGTGAAGAACTCCTGTTCTATCCTCACA 3233377 Query 46564 GCATCCGAT-ATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAA 46622 |||| ||| ||||| | | || || | | ||| |||| || | || |||||||| Sbjct 3233376 GCATT-GATGATTATTGCTTTTGCTCTCTGCTCTGATGGTTTGTGTAACAGGTGTTTAAA 3233318 Query 46623 CATTAAACATGCAAAATCACAATG-AAGGCCTTCATCTCTACTAATTAATTCGTTAGAAA 46681 ||| | || ||||| ||||| || || |||| || ||| |||| | || || |||| Sbjct 3233317 -ATTCAGCAGGCAAAGTCACAGTGTAAACCCTTGAT-TCTGATAATAAGTTAATTGGAAA 3233260 Query 46682 ATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAG 46741 ||||||| |||| ||||| | | | ||||| |||| Sbjct 3233259 ATGTGAGGCCAG--------------------------AATATTGACACAAAAGAACCAG 3233226 Query 46742 AAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCAT 46801 ||||||| || ||||| ||| || || || | || ||| ||| | || || | Sbjct 3233225 AAAAGAAGATTCCTTCCGCAGTGGCAAAGGCTAAAACATGTTCTT-GTAGGTAGCCTCTT 3233167 Query 46802 TATG---AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTA 46858 | | |||||| || |||||||| || || |||| ||||||||||| |||| | Sbjct 3233166 TGTTCCCAATCCAACTCAAGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCCTTTCAA 3233107 Query 46859 TAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGAC 46918 ||||||| ||||||| | |||| | | |||||||| || || || || | |||| Sbjct 3233106 TAGCATTGGAGAGAAATTCCCTTTCTTTAGAATCTTTAATGTAAGTGTCAATAAGGAGAC 3233047 Query 46919 TATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTT 46978 | ||||||| ||||| |||||||| | || | ||| || || || ||||| | ||| Sbjct 3233046 TCTACATTTTAGAATGCATGTTTTCTGTGGCAACCTGGAAGCCATAGAAACAGCCCACTT 3232987 Query 46979 CAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCAC 47038 | ||||| || || ||| | |||| ||| |||||| ||||| |||| ||||||| Sbjct 3232986 CTGTAATTTGAACTTCTTGGCTAAATTATTCCACCAAATTTTCATTTGCTATGCCATCAC 3232927 Query 47039 TAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATC 47084 | || ||||| || |||| ||| | ||||||||| ||| || Sbjct 3232926 TTGCTGCAAAGAAAGCCAGGACAAGCAATATAAAATATCGTTCCTC 3232881 >seq58 Length=10378366 Score = 183 bits (202), Expect = 4e-41 Identities = 494/748 (66%), Gaps = 37/748 (5%) Strand=Plus/Plus Query 46330 ACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAAT 46389 ||||| || || || || ||| |||| | ||||| || || ||||| || ||||||| | Sbjct 1968513 ACTCCAATCTTCTGATACTCAACTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 1968572 Query 46390 GATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAAT 46449 || ||||| ||||||| |||| ||||| || | |||| | || | || | | Sbjct 1968573 GAAATATTCTCCATAATGTCAAGTGGATTTTCTACTCTGAAAATCTCGATAGAGCCCAGT 1968632 Query 46450 TCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATT 46509 | || || || ||||| || ||||| || || ||||||| || ||||| Sbjct 1968633 TTCAGCATAAGCCTGTCTGCTACAAATTCAATGCACTGCTTCATCAAAGAGCAGTTCATC 1968692 Query 46510 CCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCC 46569 || ||||| || || || | |||| || || ||||| ||||| || | ||| || Sbjct 1968693 CCAATGAGCTTCACAGGCAAGGCCTTGGTGAGGAACTCCTGTTCTATCCTAACAAAATT- 1968751 Query 46570 GATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAA 46629 |||| | | | | || || | ||| ||| || | ||| | ||| |||||| | Sbjct 1968752 GATAATTACTTTTATCCTCTTCTCCCACA--GTG--TGTAGCAAGTATTTGAACATTGAG 1968807 Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 || |||||||||| |||||||| ||||| | ||| || ||||||||||| Sbjct 1968808 CAGGCAAAATCAC-----------TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGA 1968856 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATA--GCCGCGAAAGATCCAGAAAAGA 46747 |||||||| || | | || || || || |||||| | || ||||| |||||||||| Sbjct 1968857 CCAGGCATCAGCCGTCATTTCTTAAGTCAGAATATATTGATGCAAAAGAACCAGAAAAGA 1968916 Query 46748 ATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAA 46807 | || |||| ||| || || || ||| |||||| || | | | | | | Sbjct 1968917 AGATTTCTTCCACATTAGCAAAGGCTACATCATGCTCTCCACAAATAG----ACTTTTTA 1968972 Query 46808 TCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 46867 ||| || || |||| | || ||||| ||||||||||| |||| | |||| | Sbjct 1968973 TCCTGATT----CCAAATCTGTTTTCTTCTTCACACAAGGCATCATTTCAGTGCCATTGA 1969028 Query 46868 AGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTT 46927 ||| ||| | |||||| | || |||| |||| | || | | ||| || ||| Sbjct 1969029 AGATAAATTCTTTTTCTTTGGAATTTTTA----ATGTGACAATAAGGAAACTGTATATTA 1969084 Query 46928 CTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCT 46987 | ||||| || ||| | || || || || ||||| || ||||| ||||| ||||| | Sbjct 1969085 CAGAATGTATTTTTCCTATGGCAATTTGGAATCCATAGAAACAGTGGGCTTCTGTAATTT 1969144 Query 46988 GTACCTCTGTACAAAATCG-TTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046 | | ||| | |||| | |||| ||| || |||| | ||| ||||||| | || Sbjct 1969145 GAATTTCTTGGCTAAATTGCTTCA-CCAATTTTTCATGTATTATGCCATCAC---CTGCT 1969200 Query 47047 AAAAATGCCAATACATGTTTAATAAAAT 47074 |||| |||| |||||| ||||||| Sbjct 1969201 AAAA--GCCAGAACATGTGCTATAAAAT 1969226 >seq3 Length=41493964 Score = 143 bits (158), Expect = 4e-29 Identities = 222/312 (71%), Gaps = 15/312 (5%) Strand=Plus/Plus Query 44411 TTGTACTTCCTCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATC 44470 ||| ||||| |||| ||| |||||| | || |||| | | || || || ||||||| ||| Sbjct 8287232 TTGAACTTCTTCTATATCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCTATTCGATC 8287291 Query 44471 ACCTGTATTTATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCCAATGTTCCC 44530 |||| | |||| || ||| | ||||| ||| ||| | ||| | || ||||| || || Sbjct 8287292 ACCTTTTTTTACTTCAAACTTCTCTTTACCAAAATTAAACAACACAACACCAATATTTCC 8287351 Query 44531 CCTATAATCTTCATCTATTACTCCACCTCCCACATCAAT---ACCTTTTAGAGAAAGACC 44587 ||||||||||||||||| || ||| |||| ||||| || |||| || || || Sbjct 8287352 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCCAGGCC 8287411 Query 44588 CGATCTAGGCGCTATTCTTCCATA----ACAGAATTTTGGCATAGACATACGAATATCTG 44643 || | || |||||||||||||| ||||| || | || || |||| |||| Sbjct 8287412 AGAACGTGGAGCTATTCTTCCATAGCACCCAGAA----GGAAGAGCTATCTGAATGTCTG 8287467 Query 44644 TTTTAATCAACCGTCTTTCTCC--AGGAGGGATAGTATAATCGTAAGCACTGTATAAATC 44701 |||| | ||| | |||||||| ||| || | ||||||| || |||||||| | || Sbjct 8287468 TTTTCA-CAA-GGGCTTTCTCCATAGGTGGTACTATATAATCATAGGCACTGTACAGGTC 8287525 Query 44702 ATATCCTGCCGC 44713 || ||||| || Sbjct 8287526 GTAGCCTGCGGC 8287537 >seq299 Length=1791600 Score = 120 bits (132), Expect = 4e-22 Identities = 271/405 (67%), Gaps = 2/405 (0%) Strand=Plus/Minus Query 46359 TTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATT 46418 |||||| || ||||| ||||| ||||| || || || ||||||||||||||||| ||||| Sbjct 1083411 TTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCCATAAAATCAAAGGGATT 1083352 Query 46419 AGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTC 46478 | | | ||| ||| ||||| | ||| || | ||| || || | ||||| Sbjct 1083351 TTCTGCCTGAAAAACCTTTGAGAATCCAAGTTCCATAAGTAATCTTTCAGCTATAAATTC 1083292 Query 46479 TATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGT 46538 |||||| |||||| |||| ||||| | ||||| || || | | || || Sbjct 1083291 AATATACTGGCTCATCAAAACACAGTTCATCCTAATGAGGCCAACTGGCAAGTCTTCTGT 1083232 Query 46539 AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGTTA-CTGTTTCCTCAC 46597 | |||||| || ||||| ||||||||| || ||| | | | |||| || Sbjct 1083231 TAAAAACTCCTGCTCAATTTTGACAGCATTAACAATGATCTCCCTCACCCTTTTCTTCTG 1083172 Query 46598 TTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCAT 46657 | || | || | | ||||| || || ||||| ||| | |||| |||||| Sbjct 1083171 AAGTCTTATTTACTAAGTACTGAAACACTAGGCAAGCAAAGTCATAGAGAAGTTCTTCAT 1083112 Query 46658 CTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCC 46717 |||| | || | || || ||||||||||| ||||| || | || | ||| || | || Sbjct 1083111 CTCTGTTGATCAGCTCATTGGAAAATGTGAGTCCAGGGATGGGACCTCTCTTCTTTAACC 1083052 Query 46718 AAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAG 46762 | || |||| || |||||||| | ||||| || ||||| |||| Sbjct 1083051 AGAAAATAGTAGC-AAAGATCCTCAGAAGAAAATTCCTTCCACAG 1083008 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 47070 AAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTAC 47129 |||||| || ||||| | | || || ||| ||| | || ||| ||||||| || || Sbjct 1082285 AAAATAATTCTCATCTGATTTAAGCTTGTTCTAGTGAAGGAGATCCTTTGATAAGTCAAC 1082226 Query 47130 TTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATA 47189 ||||| ||||||||||| || |||| ||| | || |||||| ||||| |||||| | || Sbjct 1082225 CTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTCATACATTTTCCAAATATCAGGGTA 1082166 Query 47190 TTGGATCGGAAAAATAACAAAT 47211 || || ||||| || |||||| Sbjct 1082165 CTGAATTGGAAATATGACAAAT 1082144 >seq2 Length=46620681 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| || || | ||| || |||||||||||||||||||| || || | ||| | Sbjct 41377777 CTTCATCTCTGCTGATCAGTTCATTGGAAAATGTGAGCCCAGGCATGAGACCTCTCTTCT 41377718 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | ||||| |||||||| || |||||||| || ||||| || ||||| ||||| || || | Sbjct 41377717 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGG 41377658 Query 46772 CGACAAGTCTCTCTCC 46787 | || | ||| || || Sbjct 41377657 CCACCACTCTTTCCCC 41377642 Score = 93.3 bits (102), Expect = 6e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186 ||| ||||| ||||||||||| || |||| ||| | ||||||||| ||||| |||||| | Sbjct 41366934 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCAGG 41366875 Query 47187 ATATTGGATCGGAAAAATAACAAATC 47212 || ||||| |||||||| ||||||| Sbjct 41366874 GTACTGGATTGGAAAAATGACAAATC 41366849 >seq30 Length=14751797 Score = 118 bits (130), Expect = 2e-21 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| | || Sbjct 820284 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATGGAC 820343 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || |||| || ||||||||||||||||| ||||| || || | | |||||| Sbjct 820344 TCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 820403 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 820404 TTTCTTACACCAT 820416 Score = 111 bits (122), Expect = 2e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || |||| ||| |||||||| ||||| | || || || || ||||| || || | || Sbjct 843147 CTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATTCTTGCTGCCAAGATG 843206 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | ||||| |||| || ||| |||| || || | |||||||| | Sbjct 843207 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAGAGTATCTAGT 843266 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | || |||||||| | |||| ||||| || |||||||||| Sbjct 843267 TCCACTGTGGTAACTCCACTGTATAAGCCTTGGATTACTTTCATGG 843312 Score = 102 bits (112), Expect = 1e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 || || | ||| ||||| || | || | || | ||||| || || || || || | Sbjct 825642 GAACCCTCATAGGTTTCATATGGGCCATGCTCCTTTGCTAGGTCACAGCTGGCTTCCAGG 825701 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACTATC 76068 || || |||||||| ||||| || |||| |||||| || | || | || || |||| || Sbjct 825702 GCTCCATAATAAATAGTTTCAAAGATCTGCTTATTCAATAACTGG-GCCTCTGGACTCTC 825760 Query 76069 AAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGG 76128 ||||||||| | || ||||| |||||||| || |||||||| ||||| |||||||| Sbjct 825761 AAAAGGATATCTCATCAGGATAAAAGCATCTGCCAGACCCTGAACCCCAATTCCAATAGG 825820 Query 76129 TCTATGTCTCTTATTGGA 76146 | ||| | ||||| || Sbjct 825821 GCGATGGCGTTTATTTGA 825838 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 76598 ACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGT 76657 ||||||||||| |||||||| || ||||| ||||||| || ||||| | || || | Sbjct 832091 ACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCGCTGC 832150 Query 76658 TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGT 76717 || || |||||||| ||||| || | ||| |||||||| | || || ||||||| ||| Sbjct 832151 TCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGT 832210 Query 76718 TCTAGATATATCGC 76731 || || || || || Sbjct 832211 TCCAGGTAAATAGC 832224 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 76510 ATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACA 76569 ||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| ||||| Sbjct 831376 ATATAACTTCTCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACA 831435 Query 76570 CATCAATGACCACTC 76584 |||||| ||||| || Sbjct 831436 CATCAAAGACCAGTC 831450 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || ||||| ||||| || ||||| | |||||||| || || Sbjct 838233 GTACCAGCATTGAAGAGAGTGGGAGAAGCATGTGTAAACCACCTCTCAGAAAGAAGGTTA 838292 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 ||||||||||| | || || || || || |||||| || |||| || | ||||||| Sbjct 838293 TATGTTTCAATTGCAGCATCAATGTCTTCTTTATGAATCCCCACAGATACCCTCATCAAC 838352 Query 77114 ATATGCTGAGGTCGTTC 77130 ||||| || |||| ||| Sbjct 838353 ATATGTTGTGGTCTTTC 838369 >seq64 Length=9676502 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | ||| || ||||||||||| |||||||| ||||| || || ||| Sbjct 6351545 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 6351486 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || ||||| ||||||||||| || || || ||||| || || || Sbjct 6351485 AGCCAGAATATTGAAGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGGCT 6351426 Query 46774 ACAA 46777 |||| Sbjct 6351425 ACAA 6351422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712823155498560