Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq7 82.4 6e-11
>seq7
Length=50527172
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| | ||||| | ||||| || ||||| ||| ||| | |||||| |
Sbjct 41286268 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGCTGAACCCTCG 41286209
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | ||| || || ||||| ||||| | || |||||
Sbjct 41286208 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 41286149
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| ||| | |||||||| || || ||| |||||||| ||| || | || ||||||
Sbjct 41286148 CAGAGATTGATCTTTGCTGGAAAGCAACTGGAAGATGGGCGTACTTTGTCTGACTACAAT 41286089
Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237
||||||||||| || || |||||
Sbjct 41286088 ATTCAAAAGGAGTCCACCCTTCA 41286066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410742238225772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |