Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30] 10,898 sequences; 2,835,250,225 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 194 4e-44 seq58 181 2e-40 seq133 179 9e-40 seq7 178 3e-39 seq5 176 1e-38 seq89 174 4e-38 seq138 172 1e-37 seq93 172 1e-37 seq4 172 1e-37 seq44 167 5e-36 seq99 163 7e-35 seq31 163 7e-35 seq14 159 8e-34 seq37 158 3e-33 seq20 149 1e-30 seq77 145 2e-29 seq32 145 2e-29 seq72 134 3e-26 seq2 131 4e-25 seq57 127 5e-24 seq63 114 3e-20 seq24 105 2e-17 seq49 102 2e-16 seq171 91.5 3e-13 seq81 89.7 1e-12 seq83 87.8 4e-12 seq6 87.8 4e-12 seq124 86.0 1e-11 >seq3 Length=68754498 Score = 194 bits (214), Expect = 4e-44 Identities = 176/219 (80%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGA-TTCTTTCTGAATATTATAGTCAGATAGAGTTCT 104400 || || ||||| ||||| | || || |||||| |||||||| |||||||| | || || Sbjct 46699767 AGTCTCAGTACAAGATGAAGGGTGGACTTCTTT-TGAATATTGTAGTCAGACAAAGAACT 46699709 Query 104401 ACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTC 104460 || ||||| ||||| ||||||||||| || || ||||| ||||||||||| |||||||| Sbjct 46699708 CCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 46699649 Query 104461 TTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520 ||||||||| ||||| || ||||||||||||| || || ||||| ||||| || || Sbjct 46699648 TTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCAAGCGT 46699589 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| ||||| ||||| |||||||| Sbjct 46699588 GATGGTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCAT 46699550 >seq58 Length=14941408 Score = 181 bits (200), Expect = 2e-40 Identities = 173/219 (79%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGA-TTCTTTCTGAATATTATAGTCAGATAGAGTTCT 104400 || || ||||| ||||| | || || |||||| |||||||| |||||||| | ||| | Sbjct 5525687 AGTCTCAGTACAAGATGAAGGGTGGACTTCTTT-TGAATATTGTAGTCAGACAAAGTACG 5525745 Query 104401 ACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTC 104460 || ||||| ||||| ||||||||||| || | ||||| ||||||||||| |||||||| Sbjct 5525746 CCCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTC 5525805 Query 104461 TTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520 |||||||| ||||| || ||||||||||||| || || ||||| ||||| || || Sbjct 5525806 CTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGT 5525865 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| ||||| || || |||||||| Sbjct 5525866 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 5525904 >seq133 Length=5915255 Score = 179 bits (198), Expect = 9e-40 Identities = 172/219 (79%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGT-TCT 104400 || || ||||| ||||| | || || || || |||||||| | |||||| | ||| | Sbjct 1746490 AGTCTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTGGTCAGACAAAGTATGC 1746549 Query 104401 ACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTC 104460 || ||||| ||||| ||||||||||| || | ||||| ||||||||||| |||||||| Sbjct 1746550 CCCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTC 1746609 Query 104461 TTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520 |||||||| ||||| || ||||||||||||| || || ||||| ||||| ||||| Sbjct 1746610 CTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGTGT 1746669 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||| |||| ||||| ||||| |||||||| Sbjct 1746670 GATGGTCTTCCCATTAAGGGTTTTCACAAAAATCTGCAT 1746708 >seq7 Length=50527172 Score = 178 bits (196), Expect = 3e-39 Identities = 170/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || ||||| ||||| | || || || || |||||||| |||||||| | ||| | Sbjct 41286051 AGTCTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGC 41286110 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| ||||||||||| || | ||||| ||||||||||| |||||||| Sbjct 41286111 CCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCC 41286170 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||||| || ||||||||||||| || || ||||| |||| || || Sbjct 41286171 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAGCCTCGAGGGTG 41286230 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| ||||| || || |||||||| Sbjct 41286231 ATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 41286268 >seq5 Length=53451024 Score = 176 bits (194), Expect = 1e-38 Identities = 155/192 (81%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427 |||||| || ||||| |||||||| | | | | || ||||| ||||| ||||||||||| Sbjct 40328417 TTCTTT-TGGATATTGTAGTCAGACAAATTGCGTCCATCTTCCAGTTGCTTTCCAGCAAA 40328359 Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487 || |||||||| ||||||||||| |||||||| |||||||| ||||| || |||||||| Sbjct 40328358 GATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATT 40328299 Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 ||||| || || ||||| ||||| ||||| || ||||| || ||||| ||||| | Sbjct 40328298 TTCTATAGTGTCCGAGGGTTCAACCTCAAGTGTGATGGTCTTCCCCGTAAGGGTTTTCAT 40328239 Query 104548 AAATATCTGCAT 104559 ||| |||||||| Sbjct 40328238 AAAAATCTGCAT 40328227 >seq89 Length=9688204 Score = 174 bits (192), Expect = 4e-38 Identities = 173/222 (78%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || ||||| ||||| | || || ||||| ||||| || |||||||| | ||| | Sbjct 7024334 AGTCTCAGTACAAGATGAAGGGTGGACTCTTT-TGAATGTTGTAGTCAGACAAAGTACGC 7024392 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| ||||||||||| || |||||||| | ||||||||| |||||||| Sbjct 7024393 CCATCTTCCAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTAATCAGGAGGAATTCCTTCC 7024452 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||||| || ||||||||||||| || || ||||| ||||| || || Sbjct 7024453 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTG 7024512 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| || ||||| ||||| || | | |||||| ||| Sbjct 7024513 ATGGTCTTCCCCGTAAGGGTTTTCACGA--AACTGCATCTTG 7024552 >seq138 Length=5537732 Score = 172 bits (190), Expect = 1e-37 Identities = 169/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || ||||| ||||| | || || || || |||||||| |||||||| | ||| | Sbjct 893901 AGTCTCAGTACAAGATGAACGGTGGACTCCTTTTGAATATTGTAGTCAGAAAAAGTACGC 893842 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| ||||||| ||| || | ||||| ||||||||||| |||||||| Sbjct 893841 CCATCTTCCAGTTGCTTTCCAGAAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCC 893782 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||||| || ||||||||||||| || || || || ||||| || || Sbjct 893781 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCAAGGGCTCAACCTCAAGCATA 893722 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||| | || ||||| ||||| ||||| |||||||| Sbjct 893721 ATGGTCGTCCCCGTAAGGGTTTTCACAAAAATCTGCAT 893684 >seq93 Length=9247444 Score = 172 bits (190), Expect = 1e-37 Identities = 185/243 (76%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 104322 CTTTATTTATTCCC-CCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATA 104380 |||| |||| | || || | || || ||||| ||||| | || || || || |||||| Sbjct 8914022 CTTTTTTTAGTACCACCACGAAGTCTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATA 8914081 Query 104381 TTATAGTCAGATAGAGTTCTACCGTCTTCT----AGTTGTTTTCCAGCAAAAATTAGCCT 104436 || |||||||| | ||| | || ||||| ||||| ||||||||||| || | || Sbjct 8914082 TTGTAGTCAGACAAAGTACGCCCATCTTCCTTCCAGTTGCTTTCCAGCAAAGATCAATCT 8914141 Query 104437 CTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGT 104496 ||| ||||||||||| |||||||| |||||||| ||||| || ||||||||||||| || Sbjct 8914142 CTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGT 8914201 Query 104497 ATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTG 104556 || ||||| ||||| || || || ||||| || ||||| ||||| || || ||||| Sbjct 8914202 GTCCGAGGGTTCAACCTCGAGCGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTG 8914261 Query 104557 CAT 104559 ||| Sbjct 8914262 CAT 8914264 >seq4 Length=53591480 Score = 172 bits (190), Expect = 1e-37 Identities = 169/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || ||||| | || || || || || ||||| |||||||| | ||| | Sbjct 13584069 AGTCTCAGCACAAGATGAAGGGTGGACTCCTTTTGGATATTGTAGTCAGACAAAGTACGC 13584010 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 | ||||| ||||| ||||||||||| || |||||||| ||||||||||| |||||||| Sbjct 13584009 TCATCTTCCAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCC 13583950 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||||| || ||||||||||||| || || ||||| || || || || Sbjct 13583949 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAACATCAAGCGTG 13583890 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || |||| ||||| ||||| |||||||| Sbjct 13583889 ATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 13583852 >seq44 Length=18557718 Score = 167 bits (184), Expect = 5e-36 Identities = 169/218 (78%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || ||||| ||||| | || || || || |||||||| |||||||| | ||| Sbjct 841681 AGTCTCAGTACAAGATGAAGGGTGGACTCCTT-TGAATATTGTAGTCAGACAAAGTATGC 841739 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| ||||||||||| || || ||||| ||||||||||| |||||||| Sbjct 841740 CCATCTTCAAGTTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 841799 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||||| || ||||||||||| | || || ||||| ||||| | || Sbjct 841800 TTATCCTGGATCTTGGCCTTTACATTTTCGA--GTGTCCGAGGGTTCAACCTCGAACGTG 841857 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || |||| ||||| ||||| |||||||| Sbjct 841858 ATGGTCTTCCCCTTAAGGGTTTTCACAAAAATCTGCAT 841895 Score = 143 bits (158), Expect = 6e-29 Identities = 159/211 (75%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | ||||| || || ||||| || |||||||| | ||| || |||| ||| Sbjct 14945191 AGATGAAGGGTAGACTCCTTTTGAATGTTCTAGTCAGACAAAGTATACCCATCTTTCAGT 14945132 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || |||||| | || |||||||| |||||||||| ||||| || |||||||| ||| Sbjct 14945131 TGCTTACCAGCAGAGATCAGCCTCTGCTGATCAGGAGCAATTCCATCCTTATCCTGGATC 14945072 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT-AGTGTAATAGTCTTACC 104532 || || ||||||||||||| || || ||||| ||| || || | || |||| || Sbjct 14945071 TTGGCCTTTACATTTTCTATAGTGTCCAAGGGTTCAACCCCTAAGCATGATGATCTTCCC 14945012 Query 104533 AGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 | ||| ||||| ||||| |||||||| ||| Sbjct 14945011 CGCAAGGGTTTTCACAAAAATCTGCATCTTG 14944981 >seq99 Length=8683157 Score = 163 bits (180), Expect = 7e-35 Identities = 170/222 (77%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || ||||| | || || || || |||||||| |||||||| | ||| | Sbjct 6945321 AGTCTCAGCACAAGATGAAGGGTGGACTCCTT-TGAATATTGTAGTCAGAGAAAGTACAC 6945379 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| |||||| |||| || |||||||| ||||||||| | |||||||| Sbjct 6945380 CCATCTTCCAGTTGCTTTCCACCAAAGATCAGCCTCTGCTGATCAGGAAGAATTCCTTCC 6945439 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||||| || ||||||||||||| || || ||||| ||||| || || Sbjct 6945440 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGGGGGTTCAACCTCAAGCGTG 6945499 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| || ||||| ||||| | || | ||||| ||| Sbjct 6945500 ATGGTCTTCCCTGTAAGGGTTTTCATGAAAACTTGCATCTTG 6945541 >seq31 Length=29319519 Score = 163 bits (180), Expect = 7e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || ||||| ||| | | || || ||||| |||||||| |||||||| | || | Sbjct 3469703 AGTCTCAGTACAAGAAGAAGGGTGGACTCTTTTTGAATATTGTAGTCAGACAAAGCACGC 3469644 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| ||| ||||||| || | ||||| ||||||||||| |||||||| Sbjct 3469643 CCATCTTCCAGTTGCTTTGCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCC 3469584 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||||| || ||||||||||||| || || ||||| |||| || || Sbjct 3469583 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTTGAGCGTG 3469524 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || |||| ||||| || || |||||||| Sbjct 3469523 ATGGTCTTCCCCATAAGGGTTTTCACGAAAATCTGCAT 3469486 Score = 127 bits (140), Expect = 5e-24 Identities = 126/162 (78%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| |||| ||||||||||| ||| ||||||| ||||||||||| |||||||| Sbjct 25759869 CCGTCTTCCTGTTGCTTTCCAGCAAAGATT-GCCTCTGCTGATCAGGAGGAATTCCTTCC 25759927 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||| | || |||||||||||| || || ||||| |||| || || Sbjct 25759928 TTATCCTGGATCATGGCCTTTACATTTTCTGTAGTGTCTGAGGGTTCAGCCTCGAGCGTG 25759987 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 | ||||| || |||| ||||| | || |||||||| ||| Sbjct 25759988 GTGGTCTTCCCCATAAGGGTTTTCATGAAAATCTGCATCTTG 25760029 >seq14 Length=40345996 Score = 159 bits (176), Expect = 8e-34 Identities = 167/218 (77%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || ||||| ||||| | || || || |||||||| || |||||||| | ||| | Sbjct 27521045 AGTCTCAGTACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGC 27520986 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || |||| | ||| ||||||||||| || |||||||| || |||||||| |||||||| Sbjct 27520985 CCATCTTGCACTTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATTCCTTCC 27520926 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||||| || |||||||||||| || || ||||| ||||| || || Sbjct 27520925 TTATCCTGGATCTTGGCCTTTACATTTTCTCTAGTGTCCGAGGGTTCAACCTCGAGCGTG 27520866 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| | ||| | || |||||||| Sbjct 27520865 ATGGTCTTCCCCGTAAG-GGTTTCATGAAAATCTGCAT 27520829 >seq37 Length=22002326 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || ||||| ||||| | || || || || |||| ||| |||||||| | ||| Sbjct 17221336 AGTCTCAGTACAAGATGAACGGTGGACTCCTTTTGAAAATTGTAGTCAGACAAAGTGTGC 17221277 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || |||| ||||| ||||||||||| || |||||||| | ||||||||| |||||||| Sbjct 17221276 CCATCTTACAGTTGCTTTCCAGCAAAGATCAGCCTCTGATAATCAGGAGGAATTCCTTCC 17221217 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||||| || |||||||||| || | || | ||||| ||||| || | Sbjct 17221216 TTATCCTGGATCTTGGCCTTTACATTTTTTATAGAGTCCCAGGGTTCAACCTCAAGCATG 17221157 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| |||||||| ||||| || |||||| | ||| Sbjct 17221156 ATGGTCTTCCCAGTAAGGGTTTTCGTGAAAATCTGCGTCTTG 17221115 >seq20 Length=34163895 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | | ||| || || ||||| || |||||||| | ||| || ||||| ||| Sbjct 16611642 AGATGAAGGGCAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGCCCATCTTCCAGT 16611701 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 |||||||||||||| | ||||||| ||||||||||| |||||||| ||| |||| || Sbjct 16611702 TGTTTTCCAGCAAAGACCAGCCTCTACTGATCAGGAGGAATTCCTTCCTTACCCTGGCTC 16611761 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || || |||||||||||| || || || || ||||| |||| || ||||| || Sbjct 16611762 TTGGCCTTTACATTTTCTGTAGTGTCCAAGGGCTCAACCTCGAGTGCGATGGTCTTCCCT 16611821 Query 104534 GTAAGTGTTTTTACAAATATCTGCATTTTG 104563 ||||| ||||| || || ||| |||| ||| Sbjct 16611822 GTAAGGGTTTTCACGAAAATCCGCATCTTG 16611851 >seq77 Length=12540898 Score = 145 bits (160), Expect = 2e-29 Identities = 125/155 (81%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 ||||| ||||| ||||||||||| || | ||||| ||||||||||| |||||||| ||| Sbjct 3217751 TCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTA 3217810 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 ||||| ||||| || ||||||||||||| || || ||||| ||||| || || || Sbjct 3217811 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATG 3217870 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| ||||| || || |||||||| Sbjct 3217871 GTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 3217905 >seq32 Length=28272660 Score = 145 bits (160), Expect = 2e-29 Identities = 125/155 (81%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 ||||| ||||| ||||||||||| || | ||||| ||||||||||| |||||||| ||| Sbjct 1753122 TCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTA 1753181 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 ||||| ||||| || ||||||||||||| || || ||||| ||||| || || || Sbjct 1753182 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATG 1753241 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| ||||| || || |||||||| Sbjct 1753242 GTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 1753276 >seq72 Length=12927576 Score = 134 bits (148), Expect = 3e-26 Identities = 159/213 (75%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | || || || || ||||| || |||||||| | || | || ||||| ||| Sbjct 11135377 AGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGTCCATCTTCCAGT 11135436 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 | ||| ||||||||| | ||||||| ||||||||||| |||||||| |||||||| ||| Sbjct 11135437 TATTTACCAGCAAAAGTGAGCCTCTCCTGATCAGGAGGAATTCCTTCCTTATCCTGGATC 11135496 Query 104474 TT-TGCTT--TTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || | ||| ||| |||||| | || ||||| |||| || || || ||||| Sbjct 11135497 TTGTCCTTGACTACCTTTTCTCGAATGTCCGAGGGTTCAACCTACAGCGTGATGGTCTTC 11135556 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| ||||| ||||| ||||||| ||| Sbjct 11135557 CCTGTAAGAGTTTTCACAAAATTCTGCATCTTG 11135589 >seq2 Length=75421681 Score = 131 bits (144), Expect = 4e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || ||||| | || || || || ||||| || |||||||| | || | Sbjct 14371032 AGTCTCAGCACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGC 14371091 Query 104402 CCGTCTTC-TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTC 104460 || ||||| |||| | || |||||||| || |||||||| |||| ||| || ||| ||| Sbjct 14371092 CCATCTTCCTAGT-GCTTACCAGCAAAGATCAGCCTCTGCTGATTAGGGGGAATTTCTTT 14371150 Query 104461 TTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520 |||||||| ||||| || |||||||||||| || || |||| |||| || || Sbjct 14371151 CTTATCCTGGATCTTGGCCTTTACATTTTCTGTAGTGTCTGAGGGTTTAGCCTCGAGCGT 14371210 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || |||| ||||| ||||| |||||||| Sbjct 14371211 GATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 14371249 >seq57 Length=15126812 Score = 127 bits (140), Expect = 5e-24 Identities = 376/573 (66%), Gaps = 15/573 (3%) Strand=Plus/Plus Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCT 268762 ||||| || ||||| || || | |||||| ||| ||||||||| | ||| || Sbjct 10749436 TTTGTTATCTTTCCTATGCAATAGCATGATATCTGGCAGATGTACAAGAAAGCCAGGGCC 10749495 Query 268763 TCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATTTA 268822 || || ||||| | || | |||||||| || | ||| | | ||| || | Sbjct 10749496 TCCTTCTGGACAGCTGAGGTGGTAGATCTTTCCAAGGACGTTCAGCACTGGGAAGCCCTG 10749555 Query 268823 AAACCAGAAGAAAGAAGAT---TTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGAT 268879 || || ||||||| ||||| |||||||| |||| || || ||||| | |||||| Sbjct 10749556 AAGCCTGAAGAAA-AAGATACTTTATATCTCTCGTTCTGGCTTTCTTTGCTGCCAGTGAT 10749614 Query 268880 GGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCC 268939 ||||| || || ||||| | || ||| || | ||||| || || ||| | |||||| Sbjct 10749615 GGTATAGTAAATGAAAACATGGTGGAGCGATTTAGCCAAGAAGTTCAAATTACAGAAGCC 10749674 Query 268940 AGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTA 268999 | ||||| || || ||||| || || || || || || ||||| | |||||||||||| Sbjct 10749675 CGCTGTTTCTATGGGTTCCAAATTGCCATGGATAACATACATTCTGGGATGTACAGTCTC 10749734 Query 269000 TTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTATGAGA 269059 | || || | ||| | | | ||| ||| |||| | | || || | | || | Sbjct 10749735 CTTATTGACATTTACACAAAAGATGTCAAAGAAAGGGACTTCCTCTTCAATGCCATTGAA 10749794 Query 269060 ACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATAGCGCG 269119 | ||| ||| || || || | || | | ||| ||||| |||| | | Sbjct 10749795 AGGATGCCTTGTATG---AAGAAGGCAGACGTGACCCTGTGTTGGATTGTGGATAAAGAG 10749851 Query 269120 CCT---TACGGAGAA-AGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGG 269175 || || |||||| | ||| || |||||||| |||| ||| | ||||||| || Sbjct 10749852 GCTACCTATGGAGAACATGTT-GTAGCTTTTGCTGCTGCGAAAG---AAATCTTTTCTGG 10749907 Query 269176 GTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTC 269235 |||||||| | || |||||| | |||||| || || ||||| || | || || || Sbjct 10749908 TTCTTTTGCATCAATATTTTGGCTCAAGAAACAGGGACTGATGCCTGGCCTCACATTTTC 10749967 Query 269236 TAACGAATTGATAAGCAGGGACGAAGGTTTACA 269268 | || | || || | || || |||||||| Sbjct 10749968 CAGTGAGCTTATTAGTCGAGATGAGGGTTTACA 10750000 >seq63 Length=13740492 Score = 114 bits (126), Expect = 3e-20 Identities = 169/234 (72%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 65771 AAACTCCTCCTTACCGAAATTAAATATTAATATTCCAACATTACCTCTATAGTCTGAATC 65830 ||||| ||| || || |||||||| | || | |||||||| |||||||| ||| ||| Sbjct 12331937 AAACTTCTCTTTCCCAAAATTAAACAATACAAAACCAACATTTCCTCTATAATCTTCATC 12331878 Query 65831 TATAACACCAGCACCTACATCTATAAAGTAATTATAC-GCTAATCCAGATCGGGGAGCTA 65889 |||||||||||| |||||||| || |||| || ||| || || ||||| || ||||||| Sbjct 12331877 TATAACACCAGCTCCTACATCAATGAAGT-GTTTTACAGCCAAGCCAGAGCGTGGAGCTA 12331819 Query 65890 TTCTACCATAATATCCTCTAGGAACTGATATAATCAAATCAGTAAATACCAAT-TCTTTG 65948 ||| ||||| |||| |||||| | ||| | || | | | |||| |||| Sbjct 12331818 CTCTTCCATAGCATCCAGGAGGAACAGCTAT-CTGAATGCCGGTTTTCACAATACCTTTC 12331760 Query 65949 TCCATGGGTTGTACGGTATAATCGTACGCGCTATATAGATCATATCCTGCAGCC 66002 ||| ||||| | || ||||| || || || || || | || || || || ||| Sbjct 12331759 TCCTTGGGTGGCACCGTATAGTCATAGGCACTGTACAAGTCGTAGCCGGCGGCC 12331706 >seq24 Length=31839276 Score = 105 bits (116), Expect = 2e-17 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 |||||||| |||||||| |||||||| ||||| || ||||||||||||| || || Sbjct 11059023 TCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAG 11059082 Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| || || || ||||| || ||||| ||||| || || |||||||| Sbjct 11059083 GGTTCAACCTCGAGCGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 11059138 >seq49 Length=17435334 Score = 102 bits (112), Expect = 2e-16 Identities = 124/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCG-TCTTCTAGTTGTTTTCCAGCAAAA 104428 |||| | ||| ||||||| |||| |||| || | ||||| | || || |||||||| Sbjct 6215493 CTTTTTTAATGTTATAGTTTGATAAAGTTATATCTATCTTCCAACTGCTTACCAGCAAAG 6215434 Query 104429 A---TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485 | | ||||| || ||| ||||||| |||||||| ||| | ||||||||||||||| || Sbjct 6215433 AACATCAGCCTTTGCTGACCAGGAGGAATTCCTTCCTTAACTTGAATCTTTGCTTTTGCA 6215374 Query 104486 TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACC 104532 ||||| || ||||| ||||| | || ||| | || || || || Sbjct 6215373 TTTTCCACAGTATCAAAGGGTTCAAACTTGAGTATGATGGTGTTTCC 6215327 >seq171 Length=3042471 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 65771 AAACTCCTCCTTACCGAAATTAAATATTAATATTCCAACATTACCTCTATAGTCTGAATC 65830 ||||| ||| || || ||||||| | || | |||||||| |||||||| ||| ||| Sbjct 1173550 AAACTTCTCTTTCCCAAAATTAAGCAATACAACACCAACATTTCCTCTATAATCTTCATC 1173609 Query 65831 TATAACACCAGCACCTACATCTATAAAGTAATTATAC-GCTAATCCAGATCGGGGAGCTA 65889 |||||||||||| |||||| | || |||| || ||| || || ||||| || ||| ||| Sbjct 1173610 TATAACACCAGCTCCTACACCGATGAAGT-GTTTTACAGCCAAGCCAGAGCGTGGAACTA 1173668 Query 65890 TTCTACCATAATATCCTCTAGGAACTGATATAATCAAATCAGTAAATACCAAT-TCTTTG 65948 ||| ||| | |||| |||||| | | | || || || | |||| |||| Sbjct 1173669 CTCTTCCA-AGCATCCAGGAGGAACAGCTCTCTGAAAGTCTGT--TTCACAATAGCTTTC 1173725 Query 65949 TCCATGGGTTGTACGGTATAATCGTACGCGCT 65980 ||||| ||| | || ||||| || || || || Sbjct 1173726 TCCATAGGTGGCACAGTATAGTCATAGGCACT 1173757 >seq81 Length=11848649 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 65773 ACTCCTCCTTACCGAAATTAAATATTAATATTCCAACATTACCTCTATAGTCTGAATCTA 65832 ||| ||| || || |||||||| | || |||||||| |||||||| ||| ||||| Sbjct 872362 ACTTCTCTTTCCCAAAATTAAACAGTACACCACCAACATTTCCTCTATAATCTTCATCTA 872303 Query 65833 TAACACCAGCACCTACATCTATAAAGTAATTATAC-GCTAATCCAGATCGGGGAGCTATT 65891 ||||||| || |||||||| || |||| || ||| || || ||||| || ||||||| | Sbjct 872302 TAACACCCGCTCCTACATCAATGAAGT-GTTTTACAGCCAAGCCAGAGCGTGGAGCTACT 872244 Query 65892 CTACCA 65897 || ||| Sbjct 872243 CTTCCA 872238 >seq83 Length=10591344 Score = 87.8 bits (96), Expect = 4e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 268916 CAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAAT 268975 ||||| || || ||| | |||||| | ||||| || || ||||| || || || ||||| Sbjct 7358240 CAAGAAGTTCAAATTACAGAAGCCCGCTGTTTCTATGGGTTCCAAATTGCCATGGAAAAC 7358181 Query 268976 ATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAA 269033 || ||||| |||||||||||||| | || || |||||||| | ||| ||| |||| Sbjct 7358180 ATACATTCCGAGATGTACAGTCTCCTTATTGACACTTATATTAAAGATTCCAAAGAAA 7358123 >seq6 Length=52350410 Score = 87.8 bits (96), Expect = 4e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| || | || |||||||| || || ||| || ||| | || || ||||| Sbjct 38909199 CCATCTTCCAGCTACTTGCCAGCAAAGATGAGAGCCTGCTGGTCAAGGGGGATACCTTCC 38909258 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||||||||||| || || | | | | || || || || |||| || || Sbjct 38909259 TTATCCTGGATCTTTGCTTTCACGTTCTTGATGATGTCACTGGGCTCCACCTTCAGGGTG 38909318 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || ||| | ||||| || || || ||| | |||| |||||| Sbjct 38909319 ATGGTCGTGCCAGTCAGGGTCTTCACAGAGATCTACATTTT 38909359 >seq124 Length=6448010 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 || |||||||| |||||||| | ||| | || ||||| ||||| ||||||||||| || Sbjct 1743222 TTTTGAATATTGTAGTCAGACAAAGTACGCCCATCTTCCAGTTGCTTTCCAGCAAAGATC 1743163 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCT 104458 | ||||| ||||||||||| |||||| Sbjct 1743162 AATCTCTGCTGATCAGGAGGAATTCCT 1743136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151237629521784