Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq7 86.0 5e-12
>seq7
Length=50527172
Score = 86.0 bits (94), Expect = 5e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582
|||||| ||| |||||||||||| ||||| |||| ||| ||| | || ||||| ||
Sbjct 41286065 ATGAAGGGTGGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGCCCATCTTCCAGTTG 41286124
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || | | || || | ||||||||| || | | |||||| ||| || ||
Sbjct 41286125 CTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 41286184
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||| | | |||| || || | | || | ||||| || ||||| || || ||
Sbjct 41286185 GGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAGCCTCGAGGGTGATGGTCTTCCCCGT 41286244
Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727
|| |||||||| ||||||||||||
Sbjct 41286245 AAGGGTTTTCACGAAAATCTGCATC 41286269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421195249678898
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |