Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq7 109 5e-19
seq58 104 2e-17
seq116 100 3e-16
seq93 96.9 3e-15
seq44 93.3 4e-14
seq138 91.5 1e-13
seq133 89.7 5e-13
seq31 89.7 5e-13
seq4 89.7 5e-13
seq3 86.0 6e-12
seq77 82.4 7e-11
seq32 82.4 7e-11
seq5 82.4 7e-11
>seq7
Length=50527172
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || || || | ||| | || ||||| |||||||||||||| ||
Sbjct 41286039 GCACCACCACGAAGTCTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTAGTCA 41286098
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| || || ||| || || || |||||||| ||||||||| ||||||||| |||
Sbjct 41286099 GACAAAGTACGCCCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGA 41286158
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| ||| ||| || ||| | | ||| | ||||||| ||
Sbjct 41286159 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCA 41286218
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| |||| ||| | || || || || || ||||| || |||||||||||
Sbjct 41286219 GCCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 41286268
>seq58
Length=14941408
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || || || | ||| | || |||| |||||||||||||| ||
Sbjct 5525675 GCACCACCACGAAGTCTCAGTACAAGATGAAGGGTGGACTTCTTTTGAATATTGTAGTCA 5525734
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| || || ||| || || || |||||||| ||||||||| ||||||||| |||
Sbjct 5525735 GACAAAGTACGCCCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGA 5525794
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| ||| ||| || ||| | | ||| | ||||||| ||
Sbjct 5525795 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCA 5525854
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| || | || || || || || ||||| || |||||||||||
Sbjct 5525855 ACCTCGAGCGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 5525904
>seq116
Length=7179089
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
||||| || | || ||||| || || || ||||| || || ||||| ||| ||
Sbjct 4848381 CACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTC 4848440
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
||||| || || || |||||| | |||||| || || || |||||||| ||||||
Sbjct 4848441 CAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTG 4848500
Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
||| || ||||| | |||| |||||| | ||| || || | ||| | || ||
Sbjct 4848501 GATCTTTGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 4848560
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||||||| || || ||||| ||||||||
Sbjct 4848561 GCCGGTCAGGGTCTTCACAAAGATCTGCAT 4848590
>seq93
Length=9247444
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || || || | ||| | || ||||| |||||||||||||| || |
Sbjct 8914034 CCACCACGAAGTCTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTAGTCAGAC 8914093
Query 126947 ATCGTGCGAGAATCGTCT----AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGG 127002
| || || ||| || || || |||||||| ||||||||| ||||||||| ||
Sbjct 8914094 AAAGTACGCCCATCTTCCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGG 8914153
Query 127003 AGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTC 127062
||| || || ||||| ||| ||| || ||| | | ||| | ||||||| ||
Sbjct 8914154 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTC 8914213
Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| || | || || || || || ||||| || |||||||||||
Sbjct 8914214 AACCTCGAGCGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 8914264
>seq44
Length=18557718
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 3/230 (1%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || || || | ||| | || ||||| ||| |||||||||| ||
Sbjct 841669 GCACCACCACGAAGTCTCAGTACAAGATGAAGGGTGGACTCCTTT-GAATATTGTAGTCA 841727
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| || | ||| || || || |||||||| |||||| || ||||||||| |||
Sbjct 841728 GACAAAGTATGCCCATCTTCAAGTTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGA 841787
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| ||| ||| || ||| | | ||||| ||||||| ||
Sbjct 841788 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCGA--GTGTCCGAGGGTTCA 841845
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| || | || || || | || ||||| ||||||||||||||
Sbjct 841846 ACCTCGAACGTGATGGTCTTCCCCTTAAGGGTTTTCACAAAAATCTGCAT 841895
>seq138
Length=5537732
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || || || | ||| | || ||||| |||||||||||||| ||
Sbjct 893913 GCACCACCACGAAGTCTCAGTACAAGATGAACGGTGGACTCCTTTTGAATATTGTAGTCA 893854
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| || || ||| || || || ||||||| ||||||||| ||||||||| |||
Sbjct 893853 GAAAAAGTACGCCCATCTTCCAGTTGCTTTCCAGAAAAGATCAATCTCTGCTGATCAGGA 893794
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| ||| ||| || ||| | | ||| | |||||| |||
Sbjct 893793 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCAAGGGCTCA 893734
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || | | | || | || || || ||||| ||||||||||||||
Sbjct 893733 ACCTCAAGCATAATGGTCGTCCCCGTAAGGGTTTTCACAAAAATCTGCAT 893684
>seq133
Length=5915255
Score = 89.7 bits (98), Expect = 5e-13
Identities = 159/231 (69%), Gaps = 1/231 (0%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| | | || || || | ||| | || ||||| ||||||||||||| ||
Sbjct 1746478 GCACCACCATGAAGTCTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTGGTCA 1746537
Query 126944 CCCATCGTGCGAGA-ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGG 127002
|| || | ||| || || || |||||||| ||||||||| ||||||||| ||
Sbjct 1746538 GACAAAGTATGCCCCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGG 1746597
Query 127003 AGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTC 127062
||| || || ||||| ||| ||| || ||| | | ||| | ||||||| ||
Sbjct 1746598 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTC 1746657
Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| || | || || || | || ||||| ||||||||||||||
Sbjct 1746658 AACCTCGAGTGTGATGGTCTTCCCATTAAGGGTTTTCACAAAAATCTGCAT 1746708
>seq31
Length=29319519
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| |||||||||||||||||||| || || | || ||| || || || ||| ||
Sbjct 3469682 GTGGACTCTTTTTGAATATTGTAGTCAGACAAAGCACGCCCATCTTCCAGTTGCTTTGCA 3469623
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| ||||||||| ||||||||| ||||| || || ||||| ||| ||| || |||
Sbjct 3469622 GCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTT 3469563
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | ||| | ||||||| || || | || || | || || || | || |||
Sbjct 3469562 ACATTTTCTATAGTGTCCGAGGGTTCAACCTTGAGCGTGATGGTCTTCCCCATAAGGGTT 3469503
Query 127097 TTTACAAAAATCTGCAT 127113
|| || |||||||||||
Sbjct 3469502 TTCACGAAAATCTGCAT 3469486
>seq4
Length=53591480
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || || ||| | ||| | || ||||| ||||| |||||||| || |
Sbjct 13584078 CCACCACGAAGTCTCAGCACAAGATGAAGGGTGGACTCCTTTTGGATATTGTAGTCAGAC 13584019
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || || || |||||||| |||||| | ||||||||| |||||
Sbjct 13584018 AAAGTACGCTCATCTTCCAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGA 13583959
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || ||||| ||| ||| || ||| | | ||| | ||||| | || ||
Sbjct 13583958 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAACA 13583899
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || || | || ||||| ||||||||||||||
Sbjct 13583898 TCAAGCGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 13583852
>seq3
Length=68754498
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || || || | ||| | || |||| |||||||||||||| ||
Sbjct 46699779 GCACCACCACGAAGTCTCAGTACAAGATGAAGGGTGGACTTCTTTTGAATATTGTAGTCA 46699720
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| | | ||| || || || |||||||| |||||| || ||||||||| |||
Sbjct 46699719 GACAAAGAACTCCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGA 46699660
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || || || ||| ||| || ||| | | ||| | ||||||| ||
Sbjct 46699659 GGAATTCCTTCTTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCA 46699600
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || | || | || || || || || ||||| ||||||||||||||
Sbjct 46699599 ACCTCAAGCGTGATGGTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCAT 46699550
>seq77
Length=12540898
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || || || |||||||| ||||||||| ||||||||| ||||| || || |||||
Sbjct 3217751 TCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTA 3217810
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||| | | ||| | ||||||| || || |||| || |
Sbjct 3217811 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATG 3217870
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || || || ||||| || |||||||||||
Sbjct 3217871 GTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 3217905
>seq32
Length=28272660
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || || || |||||||| ||||||||| ||||||||| ||||| || || |||||
Sbjct 1753122 TCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTA 1753181
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||| | | ||| | ||||||| || || |||| || |
Sbjct 1753182 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATG 1753241
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || || || ||||| || |||||||||||
Sbjct 1753242 GTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 1753276
>seq5
Length=53451024
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| | | || || ||| | || | || |||| ||||| |||||||| ||
Sbjct 40328456 GCACCACCATGAAGTCTCAGCACAAGATAAAGGGTGGACTTCTTTTGGATATTGTAGTCA 40328397
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| |||| ||| || || || |||||||| |||||| | ||||||||| |||
Sbjct 40328396 GACAAATTGCGTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGA 40328337
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| ||| ||| || ||| | | ||| | ||||||| ||
Sbjct 40328336 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCA 40328277
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || | || | || || || || || ||||| | ||||||||||||
Sbjct 40328276 ACCTCAAGTGTGATGGTCTTCCCCGTAAGGGTTTTCATAAAAATCTGCAT 40328227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475436024903520
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