Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30] 10,898 sequences; 2,835,250,225 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 3e-11 >seq3 Length=68754498 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | ||||||| | ||||||| ||||| || || || | Sbjct 19110762 CCTGCTTCCAGCCGTAGAAGTGCATGCTGGTGAGTTTGCCATAATTGGGCTCAGCGATAT 19110821 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | ||||||| |||||||||||| || ||||||| | | || || ||||| |||| || Sbjct 19110822 GGATGTTCAAAGACTGGCTTTGATCAATGAAAGCTCCTCTCTCAGCTGCCATCTTGAGAA 19110881 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 || || || || || ||||| || ||||| Sbjct 19110882 CAGTTTTTTGAGAGATTTCCCATACAGTCTT 19110912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795046879982880