Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq120 244 8e-59
seq30 185 7e-41
seq102 125 5e-23
seq98 104 2e-16
seq31 93.3 3e-13
seq16 91.5 1e-12
seq54 86.0 5e-11
seq22 86.0 5e-11
>seq120
Length=6988559
Score = 244 bits (270), Expect = 8e-59
Identities = 980/1519 (65%), Gaps = 37/1519 (2%)
Strand=Plus/Minus
Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 517272
||| || || ||||| || || |||| ||| || || | |||| | ||| ||
Sbjct 3129718 ATTTGTGATGGTAATCTTGTTTTATTTTCCTGTACTCTTGTCTACAGCAGAAATATTGAG 3129659
Query 517273 AATACCATTGGCATCCAAATC-AAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 517331
|||||||| ||||| || || ||| || |||||| | ||||| || || | | ||||
Sbjct 3129658 GATACCATTAGCATC-AATTCTAAAAGTAACTTCAGTCTGAGGAACACCACAGGGTGCAG 3129600
Query 517332 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 517391
| || || ||| || | ||| | || || || ||||| || || | || ||
Sbjct 3129599 GAGGTATGCCTGTGAATTCAAACTTCCCAAGCAGGTTGTTATCCTTGGTCATGGCTCTTT 3129540
Query 517392 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 517451
||| || | | || || || ||| || || || |||| || || || ||
Sbjct 3129539 CACTTTCATATACCTGAATTAGCACACCAGGCTGGTTGTCAGAATTGGTAGTGAAGG-TC 3129481
Query 517452 TGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCT 517510
|| ||| ||| |||||| | |||||| | || | ||||| | |||||
Sbjct 3129480 TGTGTTTGCTTAGTAGGAATGATAGTGTTTTGTTTGATGAGGACAGTCATGACTCCACCA 3129421
Query 517511 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 517570
|| ||||| | |||| ||||||||||||||||||| | || | | | |||| ||
Sbjct 3129420 GCAGTTTCAATACCA-GAGAAAGAGGAGTGACATCCAGGAGCAGCAAGTCCTGAACATTC 3129362
Query 517571 TCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630
||| | | ||| ||||| |||| || | || ||||| || ||||||||||||
Sbjct 3129361 TCAGACTTGTCACCCGATAGAATGCCTGCCTGGACTGCTGCACCGTAGGCAACAGCTTCA 3129302
Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 517690
||||| || | | | ||| |||| || |||||||| || | ||||||| |||
Sbjct 3129301 TCAGGGTTGATGCTCTTATTCAGTTCCTTTCCATTGAAGAAGTCCTGCAGAAGTT-TCTG 3129243
Query 517691 AC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 517749
| |||||| ||| ||| || ||||| | | ||||| || || | |||||| || ||
Sbjct 3129242 AATCTTAGGGATAAGAGTAGAACCTCCCATCAGGACAATGTCGTGGATCTGTGACTTGTC 3129183
Query 517750 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGA 517809
||| || | |||| | | ||||| || || || ||| | | |||| ||| |
Sbjct 3129182 CAGCTTGGCATCCCTAAGTGCCTTTTCTACAGGGTCTAGAGTGCCACGGAACAGGTCAGT 3129123
Query 517810 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAAC 517867
| || ||||| ||| ||| | ||| || || | || || || |||||||| ||
Sbjct 3129122 ATTCAGCTCTTCAAATCGAGCACGAGT--GATGGAGGTGTAGAAGTCGATTCCTTC--AC 3129067
Query 517868 AAAG--AATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTT 517925
|||| |||||| ||||| | | || || ||| || | || || || ||
Sbjct 3129066 AAAGGGAATCAATCTCAATACTGGCCTGGGTGCTAGAGGAGAAGTTGCGCTTGGCTGATT 3129007
Query 517926 CACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGCTGATTGATTCAAATCTGTTTTA 517981
|||| || || | || || || ||| | | || | |||| ||| | |||
Sbjct 3129006 CACAAGCAGTGCAGAGATGCCGCAAAGCTCTCTTGTTCTCACTGATG----TCTTTCTTA 3128951
Query 517982 TATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTTCAC 518039
| || ||||| || || | ||| | || | | || | ||| |||| |
Sbjct 3128950 TGCTTGTGTTTGAACTCAGTAATGAA--ATGGATGACCATTCAGTTGTTAAAGTCTTTGC 3128893
Query 518040 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 518099
| ||||| | |||| ||| | |||| | |||| | || | |||||| |||| || |
Sbjct 3128892 CACCCAAGTGGGTATCTCCAGCTGTAGATTTTACCTCAAAGATTCCATCCTCAATAGTGA 3128833
Query 518100 AAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT 518159
| | |||||| || ||||| |||| |||||||| |||||||| | ||
Sbjct 3128832 GGATTGACACATCAAAAGTGCCACCTCCCAAGTCAAAAATCAGTACATTTCTCTCAGCTC 3128773
Query 518160 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 518219
| || || || | |||||| |||| |||| |||||||||| ||||| ||||| || |
Sbjct 3128772 CAACCTTCTTGTCTAAACCATAAGCAATAGCATCAGCAGTTGGCTCATTGATAATCCTAA 3128713
Query 518220 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 518279
||||| || |||||||| |||| |||||||| || || || | || || || ||||
Sbjct 3128712 GTACATTGAGGCCAGCAATGGTTCCAGCATCTTTGGTTGCCTGCCGCTGGGAGTCATTAA 3128653
Query 518280 AATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCG 518339
| ||||| || || || | || |||| || || || || | || || ||
Sbjct 3128652 AGTATGCTGGCACGGTGACCACTGCATTGGTAACAGACTTCCCTAGGTATGCCTCTGTGA 3128593
Query 518340 TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG--GAATATTGCTTGGA 518397
||| ||||| || | | || ||| || || | | ||||| ||| || |||
Sbjct 3128592 TTTCCTTCATCTTTGTCAGAACCATGGAGGACACCTCCTCTGGATAGAAGCTTT-TTGTC 3128534
Query 518398 TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGG 518457
| ||| ||| ||||| | | || | | | |||| | || | || ||
Sbjct 3128533 TCTCCCTTG-TATTCTACTTGGACCTTGGGCCTGCCAGGATCATTTACCACCATGAAAGG 3128475
Query 518458 CCAGTATTTCATATCTGATTGAACA--CTTTGGTCATTAAAATCT-CTACCAATTAATCG 518514
||||| ||||| || || |||||| | | || ||| | | ||||||| |
Sbjct 3128474 CCAGTGCTTCATGTCAGACTGAACAAACATA---CAAACAAACATACGTCCAATTAGACA 3128418
Query 518515 TTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCC 518574
||| ||||||||| | ||||| || || || ||| | |||| ||||| ||||| ||
Sbjct 3128417 TTTGGCATCAAAACCCATGTTGGTGGGGTTCATAGCAACCTGATTCTTGGCAGCATCACC 3128358
Query 518575 AATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 518634
||||| |||| || || ||||| | |||||| ||| || || | || || |||||
Sbjct 3128357 AATCAATCGTTCAGTGTCAGTAAAGGCAACATAGCTTGGTGTGGTTCAGTTGCCCTGATC 3128298
Query 518635 ATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCC 518694
||| ||||||||||| ||||| |||| || | ||||| |||||| | || || ||
Sbjct 3128297 ATTGGCAATAATTTCCACTTTTCCATGCTGGAAGACACCCACACAAGAGTAGGTGGTGCC 3128238
Query 518695 TAAATCAATACCAATAGCA 518713
| |||||| |||| ||||
Sbjct 3128237 AAGATCAATGCCAACAGCA 3128219
>seq30
Length=29245334
Score = 185 bits (204), Expect = 7e-41
Identities = 672/1035 (65%), Gaps = 29/1035 (3%)
Strand=Plus/Plus
Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318
|||| ||| | || |||||||| ||||| | |||||| || |||||||| ||||| ||
Sbjct 24414692 GCAGAAACACTGAGGATACCATTAGCATCAATATCAAAAGTAACTTCAATCTGAGGAACA 24414751
Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCA-GATTATTATTATCTTT 517377
|| | ||||| || || ||| | || || |||||| | |||||||| ||
Sbjct 24414752 CCATGGGGTGCAGGAGGAATGCCTGTGAG-TTCAAGCTTCCCAAGCAGGTTATTATCCTT 24414810
Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437
|| | || ||||| || | | || || || || || || || | ||
Sbjct 24414811 GGTCATGGCTCTCTCACCTTCATATACCTGAATTAGCACACCACGCTGGTTGTCAGGCTA 24414870
Query 517438 AGTTGTAAATACTCTGGATTTTTTACA----AGGAATTGTTGTGTTTCTATCAATAATAT 517493
|| || || |||| | ||| || |||||| || ||||||| | || |
Sbjct 24414871 GGTAGTGAAGG-TCTG---TGTTTGCATGGTAGGAATGGTAGTGTTTCGTTTGATCAGGG 24414926
Query 517494 TGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGA 517553
||||| | ||||| |||||| | | ||| ||||||||||| |||||||| | || |
Sbjct 24414927 CAGTCATGACTCCACCAGCTGTTCCAATACCCAGAGAAAGAGGGGTGACATCCAAGAGCA 24414986
Query 517554 CAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 517613
| | |||| || ||| | | |||| ||||| ||||| || | ||||||||
Sbjct 24414987 ACAAGTCCTGAACATTCTCAGACTTGTCACCAGATAGAATGGCTGCCTGGACAGCAGCAC 24415046
Query 517614 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 517673
|||| ||||||||||||||||| || | | | || |||| || ||||||||||| |
Sbjct 24415047 CATAGGCAACAGCTTCATCAGGGTTGATGCTCTTGTTCAGTTCCTTTCCATTGAAAAAGT 24415106
Query 517674 TTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 517732
|| ||||| | ||| | ||| || ||||||| || || || || | ||||| ||
Sbjct 24415107 CTG-CAGAAGCT-TCTGAATCTTGGGGATACGAGTAGAGCCCCCCACCAGGACAATGTCG 24415164
Query 517733 TGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCC 517792
|| | |||||| || ||||| || | |||| | | | ||||| || || || |||
Sbjct 24415165 TGGATCTGTGACTTGTCCAGCTTGGCATCCCTAAGAGCCTTTTCTACAGGGTCTAGAGTG 24415224
Query 517793 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATA 517851
| | |||| ||| | | || ||||| ||| ||| | || || || | || |
Sbjct 24415225 CCACGGAACAGGTCAGCATTCAGCTCTTCAAATCGAGCACGGGT--GATGGAGGTGTAGA 24415282
Query 517852 A-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
| ||||||||||| | | ||||||| ||||| | | || || || || | |
Sbjct 24415283 AGTCAATTCCTTCATAAAGGGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGCGGG 24415342
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAG-TCTTCGTAAG---GCTTTTGCTGATTGA 517966
| || || |||||||| || || || | || || ||| | || | |||
Sbjct 24415343 TGTGCTTGGCGCGTTCACAAGCAGTGAGGAGATGTTGCACAGCTCTCTTGTCCTCACTGA 24415402
Query 517967 TTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGAT 518024
| ||| | ||| || | ||||| || ||| | ||| | || | || |
Sbjct 24415403 T----GTCTTTCTTACGCTTGCATTTGAACTCAGCAATGAA--ATGGTGGACCATTCGGT 24415456
Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084
| ||||| ||||| | ||||| | || | ||| | |||| | |||| | || | ||
Sbjct 24415457 TGTCAAAGTCTTCTTCACCCAAGTGGGTGTCTCCAGCTGTAGATTTTACCTCAAAGATTC 24415516
Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144
|| | |||| || | | | ||| || || ||||| |||| ||||||||| || |
Sbjct 24415517 CAGCCTCAATAGTGAGGATTGACACACCAAAAGTGCCACCTCCCACATCAAAAATCAGCA 24415576
Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204
|||| | || | | || || | |||| | |||| ||||||||||||||| |
Sbjct 24415577 CATTTCTCTCAGCTCCAACCTCCTTGTCTAAACCAAAAGCAATAGCAGCAGCAGTTGGCT 24415636
Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264
|||| ||||| || | ||||| ||||||||| | ||| ||| |||| || || || |
Sbjct 24415637 CATTGATAATCCTAAGTACATTGAGACCAGCAGTGATTCTAGCACCTTTGGTTGCCTGCC 24415696
Query 518265 TTTGTGAATCGTTAA 518279
|| || |||||||
Sbjct 24415697 CCTGGGAGTCGTTAA 24415711
Score = 95.1 bits (104), Expect = 9e-14
Identities = 176/258 (68%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 518456 GGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGT 518515
||||| | ||||| || || |||||| |||| ||| | ||| ||| |||
Sbjct 24415876 GGCCAATGCTTCATGTCAGACTGAACAACAGCATCATCAAACCTACATCCAGTTAGACGT 24415935
Query 518516 TTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCA 518575
|| |||||||| || ||||| || || | ||| | |||| ||||| ||||| |||
Sbjct 24415936 TTGACATCAAAATCCGTGTTGGTGGGGTTCGTAGCAACCTGATTCTTGGCAGCATCACCA 24415995
Query 518576 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 518635
||| |||| || || ||||| || | ||| ||| || || | | || |||||
Sbjct 24415996 ATC----GTTCGGTGTCAGTAAAGGAGATATAGCTTGGTGTGGTTTGGTGGCCCTGATCG 24416051
Query 518636 TTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCT 518695
| ||||||||||| ||||| |||| || | ||||| |||||| | || || ||
Sbjct 24416052 CTGGCAATAATTTCCACTTTCCCATGCTGGAAGACACCCACACAAGAGTAGGTGGTGCCA 24416111
Query 518696 AAATCAATACCAATAGCA 518713
| |||||| |||| ||||
Sbjct 24416112 AGATCAATGCCAACAGCA 24416129
>seq102
Length=8212846
Score = 125 bits (138), Expect = 5e-23
Identities = 363/548 (66%), Gaps = 18/548 (3%)
Strand=Plus/Minus
Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669
|||||||| ||||||||||||||||| || | | | ||| |||| || |||||||||
Sbjct 1723293 GCACCATAGGCAACAGCTTCATCAGGGTTGATGCTCTTATTCAGTTCCTTTCCATTGAAA 1723234
Query 517670 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728
|| | ||||| | ||| | ||| || ||||||| || || || || | |||||
Sbjct 1723233 AAGTCCTGTAGAAGCT-TCTGAATCTTGGGGATACGAGTAGAACCCCCCACCAGGACAAT 1723175
Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788
|| || | |||||| |||||||| || | |||| | | | ||||| || || || ||
Sbjct 1723174 GTCGTGGATCTGTGACTTATCCAGCTTGGCATCCCTAAGAGCCTTTTCTACAGGGTCTAG 1723115
Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT- 517847
| | | |||| ||| | | || ||||| ||| ||| | || || || |
Sbjct 1723114 AGTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAATCGAGCACGGGT--GATGGAGGTG 1723057
Query 517848 TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 517906
|| || || |||||||| | | ||||||| ||||| | | || || ||| ||
Sbjct 1723056 TAGAAGTCGATTCCTTCATAAAGGGAATCAATCTCAATACTGGCCTGGGTGCTAGAGGAG 1722997
Query 517907 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGA 517962
|| | || || || |||||||| || || | || | || | || ||| | || |
Sbjct 1722996 AGGGTGCGCTTGGCTCGTTCACAAGCAGTGCGGAGACGCCGCACAGCTCTCTTGTTCTCA 1722937
Query 517963 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGA 518020
|||| ||| | |||| || | ||||| || ||| | ||| | || |
Sbjct 1722936 CTGAT----GTCTTTCTTATGCTTGCGTTTGAATTCAGCAATGAA--ATGGTTGACCATT 1722883
Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080
|| |||||||| |||||||| ||||| | || | ||| | |||| | |||| | ||
Sbjct 1722882 CGGTTATCAAAGTCTTCACCACCCAAGTGGGTGTCTCCAGCTGTAGATTTTACCTCAAAG 1722823
Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140
| |||||| |||| || | | | |||||| || ||||| |||| |||||||||
Sbjct 1722822 ATTCCATCCTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCCAAATCAAAAATC 1722763
Query 518141 AGTACATT 518148
|| |||||
Sbjct 1722762 AGCACATT 1722755
Score = 113 bits (124), Expect = 3e-19
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|| || || | |||||| |||| ||||||||||||||| ||||| ||||| || | |||
Sbjct 1722652 TTCTTGTCTAAACCATAAGCAATAGCAGCAGCAGTTGGCTCATTGATAATCCTAAGTACA 1722593
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| ||||||||||| |||| |||||||| || || || | || || |||||||| |||
Sbjct 1722592 TTGAGACCAGCAATGGTTCCAGCATCTTTGGTTGCCTGCCGCTGGGAGTCGTTAAAGTAT 1722533
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
|| || || || | || ||||
Sbjct 1722532 GCTGGCACTGTGACCACCGCAT 1722511
Score = 105 bits (116), Expect = 5e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||||| || ||||| || || || ||| | |||| ||||| ||||| |||||||
Sbjct 1721880 CAAAAACCGTGTTGGTGGGGTTCATAGCAACCTGATTCTTGGCAGCATCACCAATCAATC 1721821
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
|||| || || ||||| | ||||| ||| || || || || || ||||| || ||||
Sbjct 1721820 GTTCGGTGTCAGTAAAGGCGACATAGCTTGGTGTGGTTCGGTTGCCCTGATCGTTGGCAA 1721761
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
||||||| ||||| || | || | ||||| |||||| | || || || | |||||
Sbjct 1721760 TAATTTCCACTTTTCCGTGCTGGAAGACACCCACACAAGAGTAGGTGGTGCCAAGATCAA 1721701
Query 518703 TACCAATAGCA 518713
| |||| ||||
Sbjct 1721700 TGCCAACAGCA 1721690
>seq98
Length=8690808
Score = 104 bits (114), Expect = 2e-16
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 366998 TAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATT 367057
|||| || ||||| ||||| ||||| ||||||||| | ||||| | ||||||||||
Sbjct 6380849 TAGCTACTATAGCTTTTGGAATGGGCATTAATAAAGCTGATGTCCGTAAAGTTATTCATT 6380908
Query 367058 ATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATG 367117
|||| ||||| ||| | || ||| ||||| || |||||||| ||||| || |||||||
Sbjct 6380909 ATGGTGCTCCTAAGGAAATGGAATCATATTACCAGGAAATTGGGAGAGCGGGCCGTGATG 6380968
Query 367118 GA 367119
||
Sbjct 6380969 GA 6380970
>seq31
Length=29319519
Score = 93.3 bits (102), Expect = 3e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 518167 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 518226
||| || ||||| || || | ||||||||| || ||||||||||||| | | |||||
Sbjct 28681895 TTTGTCTAGACCGTAGGCCAGAGCAGCAGCTGTGGGTTCATTAATAACCCCAAGTACATT 28681954
Query 518227 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286
|| |||| ||| || ||||| |||||||| ||||| ||||| || | ||||| ||
Sbjct 28681955 CAGTCCAGATATTTGACCAGCATCCTTAGTGGCCTGTCTCTGTGAGTCACTGAAATAAGC 28682014
Query 518287 AGGAACAGT 518295
|||||| ||
Sbjct 28682015 AGGAACTGT 28682023
>seq16
Length=36376318
Score = 91.5 bits (100), Expect = 1e-12
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500
||||| || || |||| || ||||||||||| ||||| || ||| | || || ||| |
Sbjct 27009066 TGTACACTTATCCTGACTGAAGGAGATTCAGCCAAAACTTTGGCTGTTTCAGGCCTTGGT 27009125
Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560
|| |||||||||| | || || |||||||| |||||||||||| | | ||||| |
Sbjct 27009126 GTGGTTGGAAGAGACAAATACGGGGTTTTCCCTCTTAGAGGAAAATTACTCAATGTCCGA 27009185
Query 635561 GATGCTAGTCCTAAA 635575
|| ||| || ||||
Sbjct 27009186 GAAGCTTCTCATAAA 27009200
>seq54
Length=15450234
Score = 86.0 bits (94), Expect = 5e-11
Identities = 204/305 (67%), Gaps = 14/305 (5%)
Strand=Plus/Plus
Query 517098 TTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTCAAATT 517157
|||| || ||||| ||| ||||| | |||| || || ||| | || |||| |
Sbjct 14189307 TTTCCAACTCATTCCTAGTATCAATACGCTCTTTAAGTTTTTTGTCTTCCTCAGCAAACT 14189366
Query 517158 CTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT----A 517213
| ||| || ||| |||||| ||||||| |||||| | || || || |
Sbjct 14189367 TCTCAGCATCATTAACCATTCTTTCAATTT---CTTCAG-GTGTCAAGCGGTTTTGGTCA 14189422
Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGCAGTCACATTA 517270
|| ||||| || || || || |||||| ||| ||| || | || || || |
Sbjct 14189423 TTGGTAATTGTGATCTTATT---TTTGTTCCCTGTACCTTTGTCTTCAGCTGTTACCCGA 14189479
Query 517271 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 517330
||||| ||||| |||| | ||||| ||||||||||| || || ||||||| |||||
Sbjct 14189480 AGAATGCCATTCACATCTATTTCAAAAGTGACTTCAATCTGGGGCACCCCTCGGGGAGCA 14189539
Query 517331 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 517390
|| || || || || || |||||| |||||| | || ||||| || || ||||
Sbjct 14189540 GGAGGAATTCCAGTCAGATCAAATGTACCCAGAAGGTGGTTGTCTTTTGTCAAGGGTCGT 14189599
Query 517391 TCACC 517395
|||||
Sbjct 14189600 TCACC 14189604
>seq22
Length=32233543
Score = 86.0 bits (94), Expect = 5e-11
Identities = 133/187 (71%), Gaps = 10/187 (5%)
Strand=Plus/Minus
Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT-GTCTTGGTTTTTATCAAG 518175
||| ||||||| | |||| | ||| | | |||| |||| | |||| || ||
Sbjct 15308580 GTTTCACCACCTAAATCATATATAGCAATAATCATATCTTCAGACTTG-------TCTAG 15308528
Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA-ACATTAAGACCAG 518234
|||||| | | ||||||||| || |||||||| |||| || || ||||| || ||
Sbjct 15308527 ACCATAGGTGAGAGCAGCAGCTGTGGGTTCATTCATAAC-CTAAAGTACATTCAGTAGAG 15308469
Query 518235 CAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAG 518294
||| || |||||||||||||| | ||| ||||| || || ||||| |||||||| |
Sbjct 15308468 ATATTTGACCAGCATCTTTAGTGGCCTATCTGTGTGAGTCATTGAAATAAGCAGGAACTG 15308409
Query 518295 TAATAAC 518301
| || ||
Sbjct 15308408 TTATCAC 15308402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780281605341988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |