Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30] 10,898 sequences; 2,835,250,225 total letters Query= NC_015049.1 Length=124335 Score E Sequences producing significant alignments: (Bits) Value seq213 87.8 1e-12 >seq213 Length=780584 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 820 GCGGTCCAGGTCCTGAGATCTTCATTCAAAGAAATGTAGTCCCTGCCATCATAGGCCTGT 879 |||||||||| | || || || |||| || ||||| || | |||||||||||| ||| Sbjct 27662 GCGGTCCAGGAGCGCAGGTCCTCGTTCAGGGAGATGTAATCGCGGCCATCATAGGCGTGT 27721 Query 880 TGACAGTAGCCTCGAAGGAGGGTTCCATCCGGCCCCACAACACAGCCGGACATCCATTGG 939 |||| ||| || || || ||| |||||| || |||||| |||||| ||||| ||| Sbjct 27722 TGACTGTACCCACGGAGCAGGTGTCCATCAGGACCCACAGAACAGCCCTGCATCCTCTGG 27781 Query 940 AGGGTATG 947 | ||| || Sbjct 27782 AAGGTGTG 27789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397694371465488