Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_015049.1
Length=124335
Score E
Sequences producing significant alignments: (Bits) Value
seq213 87.8 1e-12
>seq213
Length=780584
Score = 87.8 bits (96), Expect = 1e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 820 GCGGTCCAGGTCCTGAGATCTTCATTCAAAGAAATGTAGTCCCTGCCATCATAGGCCTGT 879
|||||||||| | || || || |||| || ||||| || | |||||||||||| |||
Sbjct 27662 GCGGTCCAGGAGCGCAGGTCCTCGTTCAGGGAGATGTAATCGCGGCCATCATAGGCGTGT 27721
Query 880 TGACAGTAGCCTCGAAGGAGGGTTCCATCCGGCCCCACAACACAGCCGGACATCCATTGG 939
|||| ||| || || || ||| |||||| || |||||| |||||| ||||| |||
Sbjct 27722 TGACTGTACCCACGGAGCAGGTGTCCATCAGGACCCACAGAACAGCCCTGCATCCTCTGG 27781
Query 940 AGGGTATG 947
| ||| ||
Sbjct 27782 AAGGTGTG 27789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397694371465488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |