Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_016448.1
Length=196691
Score E
Sequences producing significant alignments: (Bits) Value
seq159 111 2e-19
>seq159
Length=3313288
Score = 111 bits (122), Expect = 2e-19
Identities = 160/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 2229 AATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGATCCATCTGACCTGTTCTGTCGAG 2288
||||| | ||| ||||| ||| ||| ||| ||| ||||||| ||||| ||||| ||
Sbjct 2297409 AATCAGATTCAGCTGTCCGGGAACGGGACCTGTGAGGTCCATCTCACCTGCTCTGTGGAT 2297350
Query 2289 GATCCCAATGACAACATCTCCTTCAAATGGGAGGCCTTGGGCAAGACGCTTCTACGCGAG 2348
|| | ||| ||| |||| | ||| ||| | || | | ||||| || |
Sbjct 2297349 CATTCAAATTACACTGGCTCCATTGGGTGGCAGGTCCCAGGAAGCATCTTTCTAAGCCAA 2297290
Query 2349 CCCAACCTCACGACCTCCTGGGACCCCAGGAACAGCAGTGAGCAGAACTACACGTGCATC 2408
|| |||||||| | |||||||||||||| ||| |||||| || ||||||| |||||
Sbjct 2297289 CCAAACCTCACCATCTCCTGGGACCCCAAGAATTCCAGTGAACAAAACTACATCTGCATA 2297230
Query 2409 GCCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTCTCGGCCCAGA 2454
|| | ||| | || |||||| | || ||| | ||||||||| |||
Sbjct 2297229 GCTGTGAACCCAGTCAGCAATGTGTCCTTCTCTGTCTCGGCCAAGA 2297184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629197475896080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |