Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq56 114 2e-20
seq6 96.9 6e-15
>seq56
Length=15139244
Score = 114 bits (126), Expect = 2e-20
Identities = 101/126 (80%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942
|||| ||||||||||||||||| || |||| ||| || |||||||| ||||| ||||
Sbjct 9265155 TGGTGGCCTTTGCTGCTGTGGAAGGGGTCTTCTTCTCAGGGTCGTTTGCTGCCATATTCT 9265214
Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002
|||| ||| ||| ||| ||||||||| || |||||||| |||||||||||||| |
Sbjct 9265215 GGCTAAAGAAGAGAGGGCTCATGCCCGGACTCACGTTTTCCAATGAGCTCATCAGCAGAG 9265274
Query 26003 ACGAGG 26008
| ||||
Sbjct 9265275 ATGAGG 9265280
>seq6
Length=52350410
Score = 96.9 bits (106), Expect = 6e-15
Identities = 131/182 (72%), Gaps = 3/182 (2%)
Strand=Plus/Plus
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
||||| ||||||||||||| || ||| | || ||||| ||||| | | ||||||
Sbjct 1187005 GTAGCTCTTGCTGCTGTGGAAGGAATCATCTTTTCTGGTTCTTTTGCACCAACATTCTGG 1187064
Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004
|||| | | |||| ||||| || || |||||||| ||||| || || ||
Sbjct 1187065 CTCAGGAAACAGGGACTGATGCCTGGCCTCACATTTTCCAATGAGCTTATTAGTCAAGAT 1187124
Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064
|||||||| ||| | ||||||||||||||| | | || | |||||| | ||||||||
Sbjct 1187125 GAGGGTCTACACTGTGATTTTGCCTGCCTGATGTTCAAG---CACTTGGTACACAAACCA 1187181
Query 26065 TC 26066
||
Sbjct 1187182 TC 1187183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928718268117120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |