Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30] 10,898 sequences; 2,835,250,225 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq89 91.5 2e-13 >seq89 Length=9688204 Score = 91.5 bits (100), Expect = 2e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134 |||||| ||||| || ||||||||||| ||||||||| |||| || | || ||||| || Sbjct 7821078 ACCATAGGGAGACCGAGGATAGAAAGGGGTGGTCTCTTTCTGGGGTATTTCCTGCACTTT 7821019 Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATA 48164 |||||||||||||| || || ||||| || Sbjct 7821018 TCCATAAAGTTCACTTGTTGAGGCTTGGTA 7820989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665403743025360