Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq3 131 3e-25
seq58 127 4e-24
seq7 123 4e-23
seq138 118 2e-21
seq93 118 2e-21
seq133 114 2e-20
seq4 111 3e-19
seq77 109 1e-18
seq32 109 1e-18
seq31 109 1e-18
seq44 104 4e-17
seq5 104 4e-17
>seq3
Length=68754498
Score = 131 bits (144), Expect = 3e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCT-CTTTAGAAATATTATAGTCGG 193191
|||||| | | || ||||| ||||| | || | || |||| ||| |||| ||||| |
Sbjct 46699777 ACCACCACGAAGTCTCAGTACAAGATGAAGGGTGGACTTCTTTTGAA-TATTGTAGTCAG 46699719
Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251
| || | || ||| || | ||| ||||| ||||| || | |||||| ||||||||||
Sbjct 46699718 ACAAAGAACTCCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAG 46699659
Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311
| |||||||||||||| || || |||| |||| |||| ||||| || || | ||||
Sbjct 46699658 GAATTCCTTCTTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAA 46699599
Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| || || || || || || || || || ||||| ||||| || |||||
Sbjct 46699598 CCTCAAGCGTGATGGTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCAT 46699550
>seq58
Length=14941408
Score = 127 bits (140), Expect = 4e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCT-CTTTAGAAATATTATAGTCGG 193191
|||||| | | || ||||| ||||| | || | || |||| ||| |||| ||||| |
Sbjct 5525677 ACCACCACGAAGTCTCAGTACAAGATGAAGGGTGGACTTCTTTTGAA-TATTGTAGTCAG 5525735
Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251
| || || | ||| || | ||| ||||| ||||| || |||||||| ||||||||||
Sbjct 5525736 ACAAAGTACGCCCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAG 5525795
Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311
| |||||||| ||||| || || |||| |||| |||| ||||| || || | ||||
Sbjct 5525796 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAA 5525855
Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| || || || || || || || || || ||||| || || || |||||
Sbjct 5525856 CCTCGAGCGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 5525904
>seq7
Length=50527172
Score = 123 bits (136), Expect = 4e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| | | || ||||| ||||| | || | ||| || |||||| ||||| ||
Sbjct 41286041 ACCACCACGAAGTCTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTAGTCAGA 41286100
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| || | ||| || | ||| ||||| ||||| || |||||||| |||||||||||
Sbjct 41286101 CAAAGTACGCCCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGG 41286160
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| ||||| || || |||| |||| |||| ||||| || || | ||| |
Sbjct 41286161 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAGC 41286220
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || || || ||||| || || || |||||
Sbjct 41286221 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 41286268
>seq138
Length=5537732
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| | | || ||||| ||||| | || | ||| || |||||| ||||| ||
Sbjct 893911 ACCACCACGAAGTCTCAGTACAAGATGAACGGTGGACTCCTTTTGAATATTGTAGTCAGA 893852
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| || | ||| || | ||| ||||| | ||| || |||||||| |||||||||||
Sbjct 893851 AAAAGTACGCCCATCTTCCAGTTGCTTTCCAGAAAAGATCAATCTCTGCTGATCAGGAGG 893792
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| ||||| || || |||| |||| |||| ||||| || | | ||||||
Sbjct 893791 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCAAGGGCTCAAC 893732
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | || || | || || || ||||| ||||| || |||||
Sbjct 893731 CTCAAGCATAATGGTCGTCCCCGTAAGGGTTTTCACAAAAATCTGCAT 893684
>seq93
Length=9247444
Score = 118 bits (130), Expect = 2e-21
Identities = 166/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191
||||||| | | || ||||| ||||| | || | ||| || |||||| ||||| |
Sbjct 8914032 TACCACCACGAAGTCTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTAGTCAG 8914091
Query 193192 ATAACGTTCTAGAATCGTCT----AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCA 193247
| || || | ||| || | ||| ||||| ||||| || |||||||| ||||||
Sbjct 8914092 ACAAAGTACGCCCATCTTCCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCA 8914151
Query 193248 GGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGAC 193307
||||| |||||||| ||||| || || |||| |||| |||| ||||| || || |
Sbjct 8914152 GGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGT 8914211
Query 193308 TCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || || || || ||||| || || || |||||
Sbjct 8914212 TCAACCTCGAGCGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 8914264
>seq133
Length=5915255
Score = 114 bits (126), Expect = 2e-20
Identities = 154/213 (72%), Gaps = 1/213 (0%)
Strand=Plus/Plus
Query 193149 AGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGT-TCTAGAATC 193207
||||| ||||| | || | ||| || |||||| | ||| || || || | |||
Sbjct 1746496 AGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTGGTCAGACAAAGTATGCCCCATC 1746555
Query 193208 GTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 193267
|| | ||| ||||| ||||| || |||||||| ||||||||||| |||||||| |||||
Sbjct 1746556 TTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 1746615
Query 193268 TTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGT 193327
|| || |||| |||| |||| ||||| || || | ||||| || || || || ||
Sbjct 1746616 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGTGTGATGGT 1746675
Query 193328 TTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | || ||||| ||||| || |||||
Sbjct 1746676 CTTCCCATTAAGGGTTTTCACAAAAATCTGCAT 1746708
>seq4
Length=53591480
Score = 111 bits (122), Expect = 3e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191
||||||| | | || || || ||||| | || | ||| || ||||| ||||| |
Sbjct 13584080 TACCACCACGAAGTCTCAGCACAAGATGAAGGGTGGACTCCTTTTGGATATTGTAGTCAG 13584021
Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251
| || || | ||| || | ||| ||||| ||||| || | ||||| ||||||||||
Sbjct 13584020 ACAAAGTACGCTCATCTTCCAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGAG 13583961
Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311
| |||||||| ||||| || || |||| |||| |||| ||||| || || | ||||
Sbjct 13583960 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAA 13583901
Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| || || || || || || || | || ||||| ||||| || |||||
Sbjct 13583900 CATCAAGCGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 13583852
>seq77
Length=12540898
Score = 109 bits (120), Expect = 1e-18
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | ||| ||||| ||||| || |||||||| ||||||||||| |||||||| |||
Sbjct 3217751 TCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTA 3217810
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| || || |||| |||| |||| ||||| || || | ||||| || || || ||
Sbjct 3217811 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATG 3217870
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || ||||| || || || |||||
Sbjct 3217871 GTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 3217905
>seq32
Length=28272660
Score = 109 bits (120), Expect = 1e-18
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | ||| ||||| ||||| || |||||||| ||||||||||| |||||||| |||
Sbjct 1753122 TCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTA 1753181
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| || || |||| |||| |||| ||||| || || | ||||| || || || ||
Sbjct 1753182 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATG 1753241
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || ||||| || || || |||||
Sbjct 1753242 GTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 1753276
>seq31
Length=29319519
Score = 109 bits (120), Expect = 1e-18
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| | | || ||||| ||| | | || | |||||| |||||| ||||| ||
Sbjct 3469713 ACCACCACAAAGTCTCAGTACAAGAAGAAGGGTGGACTCTTTTTGAATATTGTAGTCAGA 3469654
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| | | ||| || | ||| ||| | ||||| || |||||||| |||||||||||
Sbjct 3469653 CAAAGCACGCCCATCTTCCAGTTGCTTTGCAGCAAAGATCAATCTCTGCTGATCAGGAGG 3469594
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| ||||| || || |||| |||| |||| ||||| || || | |||||
Sbjct 3469593 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAAC 3469534
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| || || || || || || | || ||||| || || || |||||
Sbjct 3469533 CTTGAGCGTGATGGTCTTCCCCATAAGGGTTTTCACGAAAATCTGCAT 3469486
>seq44
Length=18557718
Score = 104 bits (114), Expect = 4e-17
Identities = 161/228 (71%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| | | || ||||| ||||| | || | ||| || ||| |||| ||||| ||
Sbjct 841671 ACCACCACGAAGTCTCAGTACAAGATGAAGGGTGGACTCCTTTGAA-TATTGTAGTCAGA 841729
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| || ||| || | ||| ||||| ||||| || | |||||| |||||||||||
Sbjct 841730 CAAAGTATGCCCATCTTCAAGTTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 841789
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| ||||| || || |||| |||| |||| ||| || || | |||||
Sbjct 841790 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT--TCGAGTGTCCGAGGGTTCAAC 841847
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| | || || || || || | || ||||| ||||| || |||||
Sbjct 841848 CTCGAACGTGATGGTCTTCCCCTTAAGGGTTTTCACAAAAATCTGCAT 841895
>seq5
Length=53451024
Score = 104 bits (114), Expect = 4e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
||||| ||||| || || | | ||| || | ||| ||||| ||||| || | |||
Sbjct 40328408 ATATTGTAGTCAGACAAATTGCGTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGCCTC 40328349
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|| ||||||||||| |||||||| ||||| || || |||| |||| |||| |||||
Sbjct 40328348 TGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTG 40328289
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| || | ||||| || || || || || || || || || ||||| | ||| || |||
Sbjct 40328288 TCCGAGGGTTCAACCTCAAGTGTGATGGTCTTCCCCGTAAGGGTTTTCATAAAAATCTGC 40328229
Query 193359 AT 193360
||
Sbjct 40328228 AT 40328227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899531844579360
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