Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq154 170 2e-36
seq140 168 8e-36
seq29 161 1e-33
seq23 161 1e-33
seq2 109 7e-18
seq61 100 3e-15
seq15 86.0 8e-11
>seq154
Length=3898418
Score = 170 bits (188), Expect = 2e-36
Identities = 168/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| ||
Sbjct 2810156 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 2810097
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 2810096 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 2810037
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| |||| | |||| ||||||||| ||||||||
Sbjct 2810036 TGTCGTTCACGAACGAGTTCATGATGAACATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2809977
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 2809976 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 2809940
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| ||
Sbjct 3573950 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 3574009
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 3574010 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 3574069
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 3574070 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 3574129
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 3574130 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 3574166
Score = 161 bits (178), Expect = 1e-33
Identities = 166/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| ||
Sbjct 2836621 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 2836562
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 2836561 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 2836502
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | ||| ||||||||| ||||||||
Sbjct 2836501 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTCGACGAGATGCCCGTGTCGGGGT 2836442
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 2836441 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 2836405
Score = 145 bits (160), Expect = 9e-29
Identities = 151/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| ||
Sbjct 3652547 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 3652606
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 3652607 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 3652666
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| ||| ||| | ||||||||
Sbjct 3652667 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGGTGCTCGTGTCGGGGT 3652726
Query 1254523 GCACCTGCTTGAGCACCT 1254540
|||||||||| |||||||
Sbjct 3652727 GCACCTGCTTCAGCACCT 3652744
>seq140
Length=5458049
Score = 168 bits (186), Expect = 8e-36
Identities = 161/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| ||
Sbjct 5337084 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 5337025
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 5337024 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 5336965
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 5336964 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 5336905
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
|||||||||| |||||||||||||||
Sbjct 5336904 GCACCTGCTTCAGCACCTTGTAGATG 5336879
>seq29
Length=29433701
Score = 161 bits (178), Expect = 1e-33
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| ||
Sbjct 14431782 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 14431841
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 14431842 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 14431901
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 14431902 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 14431961
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 14431962 GCACCTGCTTCAGCACCTTGTA 14431983
Score = 104 bits (114), Expect = 3e-16
Identities = 90/112 (80%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 1254448 CGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGA 1254507
||||||| |||| |||||||| || ||||||||||||| ||| | |||| ||||
Sbjct 14508669 CGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGA 14508728
Query 1254508 TGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
||||| |||||||||||||||||| ||||||||||| | | || ||||||
Sbjct 14508729 TGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 14508780
Score = 93.3 bits (102), Expect = 5e-13
Identities = 100/131 (76%), Gaps = 1/131 (1%)
Strand=Plus/Plus
Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224
|| || ||||| | || || || || |||||| | ||||||||| | |||| || ||
Sbjct 25040764 ACACTTTTTGAACTTATTCTGGCTGCAAACTACTTAGACATCAAGGGTTTGCTGGACGTT 25040823
Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284
|||||| |||| ||||| ||||| ||||| ||| | || ||||||||| ||||||||
Sbjct 25040824 ACATGCAAGCCTGTTGCCAATATGATTAAGGGGAAGACTCCTGAGGAGATC-GCAAGACC 25040882
Query 1592285 TTTAACATCAA 1592295
|| || |||||
Sbjct 25040883 TTCAATATCAA 25040893
>seq23
Length=32015139
Score = 161 bits (178), Expect = 1e-33
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||| | |||||| | ||
Sbjct 1901358 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 1901299
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| ||||||| || ||||||| |||| |
Sbjct 1901298 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 1901239
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| ||||||||| |||||| |
Sbjct 1901238 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGAT 1901179
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 1901178 GCACCTGCTTCAGCACCTTGTA 1901157
Score = 161 bits (178), Expect = 1e-33
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||| | |||||| | ||
Sbjct 1907670 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 1907729
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| ||||||| || ||||||| |||| |
Sbjct 1907730 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 1907789
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| ||||||||| |||||| |
Sbjct 1907790 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGAT 1907849
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 1907850 GCACCTGCTTCAGCACCTTGTA 1907871
>seq2
Length=75421681
Score = 109 bits (120), Expect = 7e-18
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165
||||||| || || || ||| | ||||||| | || || | || || || |
Sbjct 59750437 AGAAGCGGACTGATGATATCCCTGTGTGGGACCAAGAATTCCTGAAAGTTGACCAAGGAA 59750496
Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225
| || ||||| | || || || || |||||| | ||||||||| | |||| ||| ||
Sbjct 59750497 CACTTTTTGAACTTATTCTGGCTGCAAACTACTTAGACATCAAGGGTTTGCTGGATGTTA 59750556
Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285
|||||| |||| ||||| ||||| ||||| ||| | || |||||||||||||||||||
Sbjct 59750557 CATGCAAGACTGTTGCCAATATGATTAAGGGGAAGACTCCTGAGGAGATCCGCAAGACCT 59750616
Query 1592286 TTAACATCAA 1592295
| || |||||
Sbjct 59750617 TCAATATCAA 59750626
Score = 87.8 bits (96), Expect = 2e-11
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 1592200 CGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAA 1592259
|||||||||| | |||| || || |||||| |||| ||||||||||| ||||| ||
Sbjct 21649911 CGACATCAAGGGTTTGCTGGACATTACATGCAAGACTGTTGCCAACATGATTAAGGGGAA 21649970
Query 1592260 GTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295
| | || |||||||||||||||||||| || || ||
Sbjct 21649971 GACTCCTGAGGAGATCCGCAAGACCTTCAATATAAA 21650006
>seq61
Length=14469262
Score = 100 bits (110), Expect = 3e-15
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165
||||||| || || |||||| | ||||||| | || || | || || || |
Sbjct 12103332 AGAAGCGGACGGATGACATCCCTGTGTGGGACCAAGAATTCCTGAAAGTTGACCATGGAA 12103273
Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225
| || ||||| | || || || || |||||| | |||||||| | |||| || ||
Sbjct 12103272 CACTTTTTGAACTTATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTGGACATTA 12103213
Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285
||||| |||| ||||| ||||| ||||| ||| | || |||||||||||||||||||
Sbjct 12103212 CATGCAAAACTGTTGCCAATATGATTAAGGGGAAGACTCCTGAGGAGATCCGCAAGACCT 12103153
Query 1592286 TTAACATCAA 1592295
| || |||||
Sbjct 12103152 TCAATATCAA 12103143
>seq15
Length=38784467
Score = 86.0 bits (94), Expect = 8e-11
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165
||||||| || || |||||| | | ||||| | || || | || || || |
Sbjct 9015876 AGAAGCGGACGGATGACATCCCTGTGCGGGACCAAGAATTCCTGAAAGTTGACCAAGGAA 9015817
Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225
| || ||||| | || || || || |||||| | ||||||| | |||| | ||
Sbjct 9015816 CACTTTTTGAACTTATTCTGGCTGCAAACTACTTAGACATCAGAGTTTTGCTGTACATTC 9015757
Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285
|||||| |||| |||| ||||| ||||| ||| | || |||||||||||||||||||
Sbjct 9015756 CATGCAAGACTGTTGCCAGTATGATTAAGGGGAAGACTCCTGAGGAGATCCGCAAGACCT 9015697
Query 1592286 TTAACATCAA 1592295
| || |||||
Sbjct 9015696 TCAATATCAA 9015687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106244859084666
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