Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq116 143 2e-29
seq4 109 4e-19
seq138 100 2e-16
seq7 100 2e-16
seq58 95.1 8e-15
seq3 95.1 8e-15
seq14 91.5 1e-13
seq5 91.5 1e-13
seq57 89.7 3e-13
seq93 87.8 1e-12
seq133 84.2 1e-11
>seq116
Length=7179089
Score = 143 bits (158), Expect = 2e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | |||| ||||||||| ||||| ||||| || | | |||| ||||
Sbjct 4848379 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 4848438
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||| |||||||| | |||||||| | || | ||||| |||||
Sbjct 4848439 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 4848498
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || ||| |||||| | || | ||| ||| ||| || || | ||| ||||||
Sbjct 4848499 TGGATCTTTGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 4848558
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| ||||||||||||||
Sbjct 4848559 TTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 4848590
>seq4
Length=53591480
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| || || |||| |||| |||||| || || || ||||| || | | ||||||
Sbjct 13584066 CTCAGCACAAGATGAAGGGTGGACTCCTTTTGGATATTGTAGTCAGACAAAGTACGCTCA 13584007
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||||||||||||| || |||||||| | ||||| || | || | || |||||
Sbjct 13584006 TCTTCCAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTA 13583947
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || || | |||| | || || || ||||||| || |||
Sbjct 13583946 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAACATCAAGCGTGATG 13583887
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||| | ||||| || ||||| ||||||||
Sbjct 13583886 GTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 13583852
>seq138
Length=5537732
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| || || |||| |||| |||||| ||||| || ||||| || | | ||| ||
Sbjct 893898 CTCAGTACAAGATGAACGGTGGACTCCTTTTGAATATTGTAGTCAGAAAAAGTACGCCCA 893839
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||||||||||||| | ||||||| || ||||| || | || | || |||||
Sbjct 893838 TCTTCCAGTTGCTTTCCAGAAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTA 893779
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || || | |||| | || || ||| || |||| | |||
Sbjct 893778 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCAAGGGCTCAACCTCAAGCATAATG 893719
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| | ||||| ||||| || ||||| ||||||||
Sbjct 893718 GTCGTCCCCGTAAGGGTTTTCACAAAAATCTGCAT 893684
>seq7
Length=50527172
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| || || |||| |||| |||||| ||||| || ||||| || | | ||| ||
Sbjct 41286054 CTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGCCCA 41286113
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||||||||||||| || ||||||| || ||||| || | || | || |||||
Sbjct 41286114 TCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTA 41286173
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || || | |||| | || || || | || | ||| |||
Sbjct 41286174 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAGCCTCGAGGGTGATG 41286233
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| || || || ||||||||
Sbjct 41286234 GTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 41286268
>seq58
Length=14941408
Score = 95.1 bits (104), Expect = 8e-15
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| || || |||| |||| || ||| ||||| || ||||| || | | ||| ||
Sbjct 5525690 CTCAGTACAAGATGAAGGGTGGACTTCTTTTGAATATTGTAGTCAGACAAAGTACGCCCA 5525749
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||||||||||||| || ||||||| || ||||| || | || | || |||||
Sbjct 5525750 TCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTA 5525809
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || || | |||| | || || || || || | || |||
Sbjct 5525810 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATG 5525869
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| || || || ||||||||
Sbjct 5525870 GTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 5525904
>seq3
Length=68754498
Score = 95.1 bits (104), Expect = 8e-15
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| || || |||| |||| || ||| ||||| || ||||| || | | | ||
Sbjct 46699764 CTCAGTACAAGATGAAGGGTGGACTTCTTTTGAATATTGTAGTCAGACAAAGAACTCCCA 46699705
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||||||||||||| || |||||||||| ||||| || | || | || || ||
Sbjct 46699704 TCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCTTTA 46699645
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || || | |||| | || || || || |||| || |||
Sbjct 46699644 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCAAGCGTGATG 46699585
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| || ||||| ||||||||
Sbjct 46699584 GTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCAT 46699550
>seq14
Length=40345996
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/215 (70%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| || || |||| |||| ||||||||||||||| ||||| || | | ||| ||
Sbjct 27521042 CTCAGTACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGCCCA 27520983
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| | || ||||||||| || |||||||| | |||||||| | || | || |||||
Sbjct 27520982 TCTTGCACTTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATTCCTTCCTTA 27520923
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || || | || | | || || || || || | || |||
Sbjct 27520922 TCCTGGATCTTGGCCTTTACATTTTCTCTAGTGTCCGAGGGTTCAACCTCGAGCGTGATG 27520863
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| || | || ||||||||
Sbjct 27520862 GTCTTCCCCGTAAGGGT-TTCATGAAAATCTGCAT 27520829
>seq5
Length=53451024
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| || || | || |||| || ||| || || || ||||| || | |||| ||
Sbjct 40328441 CTCAGCACAAGATAAAGGGTGGACTTCTTTTGGATATTGTAGTCAGACAAATTGCGTCCA 40328382
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||||||||||||| || |||||||| | ||||| || | || | || |||||
Sbjct 40328381 TCTTCCAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTA 40328322
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || || | |||| | || || || || |||| || |||
Sbjct 40328321 TCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCAAGTGTGATG 40328262
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| || | ||| ||||||||
Sbjct 40328261 GTCTTCCCCGTAAGGGTTTTCATAAAAATCTGCAT 40328227
>seq57
Length=15126812
Score = 89.7 bits (98), Expect = 3e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | |||| ||| ||||| ||||| || || || || |||| ||||
Sbjct 1409816 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 1409757
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || |||||||| || || |||||||| | || | || ||||||||
Sbjct 1409756 TCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTGTC 1409698
>seq93
Length=9247444
Score = 87.8 bits (96), Expect = 1e-12
Identities = 151/219 (69%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| || || |||| |||| |||||| ||||| || ||||| || | | ||| ||
Sbjct 8914046 CTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGCCCA 8914105
Query 34823 TCGTCC----AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTC 34878
|| ||| ||||||||||| || ||||||| || ||||| || | || | || ||
Sbjct 8914106 TCTTCCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTC 8914165
Query 34879 CTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGT 34938
||| || | || || || || | |||| | || || || || || | ||
Sbjct 8914166 CTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGT 8914225
Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| ||||| ||||| || || || ||||||||
Sbjct 8914226 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 8914264
>seq133
Length=5915255
Score = 84.2 bits (92), Expect = 1e-11
Identities = 150/217 (69%), Gaps = 3/217 (1%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATA--GGCTGCGCT 34820
||||| || || |||| |||| |||||| ||||| || | ||| || | | ||| |
Sbjct 1746493 CTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTGGTCAGACAAAGTATGCCC- 1746551
Query 34821 CATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCT 34880
|||| |||||||||||||| || ||||||| || ||||| || | || | || ||||
Sbjct 1746552 CATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCT 1746611
Query 34881 TGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940
| || | || || || || | |||| | || || || || || | || |
Sbjct 1746612 TATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGTGTGA 1746671
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||| || | ||||| || ||||| ||||||||
Sbjct 1746672 TGGTCTTCCCATTAAGGGTTTTCACAAAAATCTGCAT 1746708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325649541685862
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |