Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq120 244 8e-59
seq30 188 5e-42
seq102 125 5e-23
seq98 98.7 7e-15
seq16 95.1 9e-14
seq31 93.3 3e-13
seq22 89.7 4e-12
seq54 86.0 5e-11
>seq120
Length=6988559
Score = 244 bits (270), Expect = 8e-59
Identities = 980/1519 (65%), Gaps = 37/1519 (2%)
Strand=Plus/Minus
Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439
||| || || ||||| || || |||| ||| || || | |||| | ||| ||
Sbjct 3129718 ATTTGTGATGGTAATCTTGTTTTATTTTCCTGTACTCTTGTCTACAGCAGAAATATTGAG 3129659
Query 281440 AATACCATTGGCATCCAAATC-AAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 281498
|||||||| ||||| || || ||| || |||||| | ||||| || || | | ||||
Sbjct 3129658 GATACCATTAGCATC-AATTCTAAAAGTAACTTCAGTCTGAGGAACACCACAGGGTGCAG 3129600
Query 281499 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 281558
| || || ||| || | ||| | || || || ||||| || || | || ||
Sbjct 3129599 GAGGTATGCCTGTGAATTCAAACTTCCCAAGCAGGTTGTTATCCTTGGTCATGGCTCTTT 3129540
Query 281559 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 281618
||| || | | || || || ||| || || || |||| || || || ||
Sbjct 3129539 CACTTTCATATACCTGAATTAGCACACCAGGCTGGTTGTCAGAATTGGTAGTGAAGG-TC 3129481
Query 281619 TGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCA 281677
|| ||| ||| |||||| | |||||| | || | ||||| | ||||||
Sbjct 3129480 TGTGTTTGCTTAGTAGGAATGATAGTGTTTTGTTTGATGAGGACAGTCATGACTCCACCA 3129421
Query 281678 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 281737
|| ||||| | |||| ||||||||||||||||||| | || | | | |||| ||
Sbjct 3129420 GCAGTTTCAATACCA-GAGAAAGAGGAGTGACATCCAGGAGCAGCAAGTCCTGAACATTC 3129362
Query 281738 TCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797
||| | | ||| ||||| |||| || | || ||||| || ||||||||||||
Sbjct 3129361 TCAGACTTGTCACCCGATAGAATGCCTGCCTGGACTGCTGCACCGTAGGCAACAGCTTCA 3129302
Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 281857
||||| || | | | ||| |||| || |||||||| || | ||||||| |||
Sbjct 3129301 TCAGGGTTGATGCTCTTATTCAGTTCCTTTCCATTGAAGAAGTCCTGCAGAAGTT-TCTG 3129243
Query 281858 AC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 281916
| |||||| ||| ||| || ||||| | | ||||| || || | |||||| || ||
Sbjct 3129242 AATCTTAGGGATAAGAGTAGAACCTCCCATCAGGACAATGTCGTGGATCTGTGACTTGTC 3129183
Query 281917 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGA 281976
||| || | |||| | | ||||| || || || ||| | | |||| ||| |
Sbjct 3129182 CAGCTTGGCATCCCTAAGTGCCTTTTCTACAGGGTCTAGAGTGCCACGGAACAGGTCAGT 3129123
Query 281977 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAAC 282034
| || ||||| ||| ||| | ||| || || | || || || |||||||| ||
Sbjct 3129122 ATTCAGCTCTTCAAATCGAGCACGAGT--GATGGAGGTGTAGAAGTCGATTCCTTC--AC 3129067
Query 282035 AAAG--AATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTT 282092
|||| |||||| ||||| | | || || ||| || | || || || ||
Sbjct 3129066 AAAGGGAATCAATCTCAATACTGGCCTGGGTGCTAGAGGAGAAGTTGCGCTTGGCTGATT 3129007
Query 282093 CACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGCTGATTGATTCAAATCTGTTTTA 282148
|||| || || | || || || ||| | | || | |||| ||| | |||
Sbjct 3129006 CACAAGCAGTGCAGAGATGCCGCAAAGCTCTCTTGTTCTCACTGATG----TCTTTCTTA 3128951
Query 282149 TATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTTCAC 282206
| || ||||| || || | ||| | || | | || | ||| |||| |
Sbjct 3128950 TGCTTGTGTTTGAACTCAGTAATGAA--ATGGATGACCATTCAGTTGTTAAAGTCTTTGC 3128893
Query 282207 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 282266
| ||||| | |||| ||| | |||| | |||| | || | |||||| |||| || |
Sbjct 3128892 CACCCAAGTGGGTATCTCCAGCTGTAGATTTTACCTCAAAGATTCCATCCTCAATAGTGA 3128833
Query 282267 AAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT 282326
| | |||||| || ||||| |||| |||||||| |||||||| | ||
Sbjct 3128832 GGATTGACACATCAAAAGTGCCACCTCCCAAGTCAAAAATCAGTACATTTCTCTCAGCTC 3128773
Query 282327 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 282386
| || || || | |||||| |||| |||| |||||||||| ||||| ||||| || |
Sbjct 3128772 CAACCTTCTTGTCTAAACCATAAGCAATAGCATCAGCAGTTGGCTCATTGATAATCCTAA 3128713
Query 282387 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 282446
||||| || |||||||| |||| |||||||| || || || | || || || ||||
Sbjct 3128712 GTACATTGAGGCCAGCAATGGTTCCAGCATCTTTGGTTGCCTGCCGCTGGGAGTCATTAA 3128653
Query 282447 AATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTG 282506
| ||||| || || || | || |||| || || || || | || || ||
Sbjct 3128652 AGTATGCTGGCACGGTGACCACTGCATTGGTAACAGACTTCCCTAGGTATGCCTCTGTGA 3128593
Query 282507 TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA--GAATATTGCTTGGA 282564
||| ||||| || | | || ||| || || | | |||||| ||| || |||
Sbjct 3128592 TTTCCTTCATCTTTGTCAGAACCATGGAGGACACCTCCTCTGGATAGAAGCTTT-TTGTC 3128534
Query 282565 TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGG 282624
| ||| ||| ||||| | | || | | | |||| | || | || ||
Sbjct 3128533 TCTCCCTTG-TATTCTACTTGGACCTTGGGCCTGCCAGGATCATTTACCACCATGAAAGG 3128475
Query 282625 CCAATATTTCATATCTGATTGAACA--CTTTGGTCATTAAAATCT-CTACCAATTAATCG 282681
||| | ||||| || || |||||| | | || ||| | | ||||||| |
Sbjct 3128474 CCAGTGCTTCATGTCAGACTGAACAAACATA---CAAACAAACATACGTCCAATTAGACA 3128418
Query 282682 TTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCC 282741
||| ||||||||| | ||||| || || | ||| | |||| ||||| ||||| ||
Sbjct 3128417 TTTGGCATCAAAACCCATGTTGGTGGGGTTCATAGCAACCTGATTCTTGGCAGCATCACC 3128358
Query 282742 AATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 282801
||||| |||| || || ||||| | |||||| ||| || || | || || |||||
Sbjct 3128357 AATCAATCGTTCAGTGTCAGTAAAGGCAACATAGCTTGGTGTGGTTCAGTTGCCCTGATC 3128298
Query 282802 ATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCC 282861
||| ||||||||||| ||||| |||| || | ||||| |||||| | || || ||
Sbjct 3128297 ATTGGCAATAATTTCCACTTTTCCATGCTGGAAGACACCCACACAAGAGTAGGTGGTGCC 3128238
Query 282862 TAAATCAATACCAATAGCA 282880
| |||||| |||| ||||
Sbjct 3128237 AAGATCAATGCCAACAGCA 3128219
>seq30
Length=29245334
Score = 188 bits (208), Expect = 5e-42
Identities = 673/1035 (65%), Gaps = 29/1035 (3%)
Strand=Plus/Plus
Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485
|||| ||| | || |||||||| ||||| | |||||| || |||||||| ||||| ||
Sbjct 24414692 GCAGAAACACTGAGGATACCATTAGCATCAATATCAAAAGTAACTTCAATCTGAGGAACA 24414751
Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCA-GATTATTATTATCTTT 281544
|| | ||||| || || ||| | || || |||||| | |||||||| ||
Sbjct 24414752 CCATGGGGTGCAGGAGGAATGCCTGTGAG-TTCAAGCTTCCCAAGCAGGTTATTATCCTT 24414810
Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604
|| | || ||||| || | | || || || || || || || | ||
Sbjct 24414811 GGTCATGGCTCTCTCACCTTCATATACCTGAATTAGCACACCACGCTGGTTGTCAGGCTA 24414870
Query 281605 AGTTGTAAATACTCTGGATTTTTTACA----AGGAATTGTTGTGTTTCTATCAATAATAT 281660
|| || || |||| | ||| || |||||| || ||||||| | || |
Sbjct 24414871 GGTAGTGAAGG-TCTG---TGTTTGCATGGTAGGAATGGTAGTGTTTCGTTTGATCAGGG 24414926
Query 281661 TGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGA 281720
||||| | |||||||||||| | | ||| ||||||||||| |||||||| | || |
Sbjct 24414927 CAGTCATGACTCCACCAGCTGTTCCAATACCCAGAGAAAGAGGGGTGACATCCAAGAGCA 24414986
Query 281721 CAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780
| | |||| || ||| | | |||| ||||| ||||| || | ||||||||
Sbjct 24414987 ACAAGTCCTGAACATTCTCAGACTTGTCACCAGATAGAATGGCTGCCTGGACAGCAGCAC 24415046
Query 281781 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 281840
|||| ||||||||||||||||| || | | | || |||| || ||||||||||| |
Sbjct 24415047 CATAGGCAACAGCTTCATCAGGGTTGATGCTCTTGTTCAGTTCCTTTCCATTGAAAAAGT 24415106
Query 281841 TTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 281899
|| ||||| | ||| | ||| || ||||||| || || || || | ||||| ||
Sbjct 24415107 CTG-CAGAAGCT-TCTGAATCTTGGGGATACGAGTAGAGCCCCCCACCAGGACAATGTCG 24415164
Query 281900 TGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCA 281959
|| | |||||| || ||||| || | |||| | | | ||||| || || || |||
Sbjct 24415165 TGGATCTGTGACTTGTCCAGCTTGGCATCCCTAAGAGCCTTTTCTACAGGGTCTAGAGTG 24415224
Query 281960 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATA 282018
| | |||| ||| | | || ||||| ||| ||| | || || || | || |
Sbjct 24415225 CCACGGAACAGGTCAGCATTCAGCTCTTCAAATCGAGCACGGGT--GATGGAGGTGTAGA 24415282
Query 282019 A-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077
| ||||||||||| | | ||||||| ||||| | | || || || || | |
Sbjct 24415283 AGTCAATTCCTTCATAAAGGGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGCGGG 24415342
Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAG-TCTTCGTAAG---GCTTTTGCTGATTGA 282133
| || || |||||||| || || || | || || ||| | || | |||
Sbjct 24415343 TGTGCTTGGCGCGTTCACAAGCAGTGAGGAGATGTTGCACAGCTCTCTTGTCCTCACTGA 24415402
Query 282134 TTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGAT 282191
| ||| | ||| || | ||||| || ||| | ||| | || | || |
Sbjct 24415403 T----GTCTTTCTTACGCTTGCATTTGAACTCAGCAATGAA--ATGGTGGACCATTCGGT 24415456
Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251
| ||||| ||||| | ||||| | || | ||| | |||| | |||| | || | ||
Sbjct 24415457 TGTCAAAGTCTTCTTCACCCAAGTGGGTGTCTCCAGCTGTAGATTTTACCTCAAAGATTC 24415516
Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311
|| | |||| || | | | ||| || || ||||| |||| ||||||||| || |
Sbjct 24415517 CAGCCTCAATAGTGAGGATTGACACACCAAAAGTGCCACCTCCCACATCAAAAATCAGCA 24415576
Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371
|||| | || | | || || | |||| | |||| ||||||||||||||| |
Sbjct 24415577 CATTTCTCTCAGCTCCAACCTCCTTGTCTAAACCAAAAGCAATAGCAGCAGCAGTTGGCT 24415636
Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431
|||| ||||| || | ||||| ||||||||| | ||| ||| |||| || || || |
Sbjct 24415637 CATTGATAATCCTAAGTACATTGAGACCAGCAGTGATTCTAGCACCTTTGGTTGCCTGCC 24415696
Query 282432 TTTGTGAATCGTTAA 282446
|| || |||||||
Sbjct 24415697 CCTGGGAGTCGTTAA 24415711
Score = 95.1 bits (104), Expect = 9e-14
Identities = 176/258 (68%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 282623 GGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGT 282682
||||||| ||||| || || |||||| |||| ||| | ||| ||| |||
Sbjct 24415876 GGCCAATGCTTCATGTCAGACTGAACAACAGCATCATCAAACCTACATCCAGTTAGACGT 24415935
Query 282683 TTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCA 282742
|| |||||||| || ||||| || || ||| | |||| ||||| ||||| |||
Sbjct 24415936 TTGACATCAAAATCCGTGTTGGTGGGGTTCGTAGCAACCTGATTCTTGGCAGCATCACCA 24415995
Query 282743 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 282802
||| |||| || || ||||| || | ||| ||| || || | | || |||||
Sbjct 24415996 ATC----GTTCGGTGTCAGTAAAGGAGATATAGCTTGGTGTGGTTTGGTGGCCCTGATCG 24416051
Query 282803 TTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCT 282862
| ||||||||||| ||||| |||| || | ||||| |||||| | || || ||
Sbjct 24416052 CTGGCAATAATTTCCACTTTCCCATGCTGGAAGACACCCACACAAGAGTAGGTGGTGCCA 24416111
Query 282863 AAATCAATACCAATAGCA 282880
| |||||| |||| ||||
Sbjct 24416112 AGATCAATGCCAACAGCA 24416129
>seq102
Length=8212846
Score = 125 bits (138), Expect = 5e-23
Identities = 363/548 (66%), Gaps = 18/548 (3%)
Strand=Plus/Minus
Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836
|||||||| ||||||||||||||||| || | | | ||| |||| || |||||||||
Sbjct 1723293 GCACCATAGGCAACAGCTTCATCAGGGTTGATGCTCTTATTCAGTTCCTTTCCATTGAAA 1723234
Query 281837 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895
|| | ||||| | ||| | ||| || ||||||| || || || || | |||||
Sbjct 1723233 AAGTCCTGTAGAAGCT-TCTGAATCTTGGGGATACGAGTAGAACCCCCCACCAGGACAAT 1723175
Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955
|| || | |||||| |||||||| || | |||| | | | ||||| || || || ||
Sbjct 1723174 GTCGTGGATCTGTGACTTATCCAGCTTGGCATCCCTAAGAGCCTTTTCTACAGGGTCTAG 1723115
Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT- 282014
| | | |||| ||| | | || ||||| ||| ||| | || || || |
Sbjct 1723114 AGTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAATCGAGCACGGGT--GATGGAGGTG 1723057
Query 282015 TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 282073
|| || || |||||||| | | ||||||| ||||| | | || || ||| ||
Sbjct 1723056 TAGAAGTCGATTCCTTCATAAAGGGAATCAATCTCAATACTGGCCTGGGTGCTAGAGGAG 1722997
Query 282074 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGA 282129
|| | || || || |||||||| || || | || | || | || ||| | || |
Sbjct 1722996 AGGGTGCGCTTGGCTCGTTCACAAGCAGTGCGGAGACGCCGCACAGCTCTCTTGTTCTCA 1722937
Query 282130 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGA 282187
|||| ||| | |||| || | ||||| || ||| | ||| | || |
Sbjct 1722936 CTGAT----GTCTTTCTTATGCTTGCGTTTGAATTCAGCAATGAA--ATGGTTGACCATT 1722883
Query 282188 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 282247
|| |||||||| |||||||| ||||| | || | ||| | |||| | |||| | ||
Sbjct 1722882 CGGTTATCAAAGTCTTCACCACCCAAGTGGGTGTCTCCAGCTGTAGATTTTACCTCAAAG 1722823
Query 282248 AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307
| |||||| |||| || | | | |||||| || ||||| |||| |||||||||
Sbjct 1722822 ATTCCATCCTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCCAAATCAAAAATC 1722763
Query 282308 AGTACATT 282315
|| |||||
Sbjct 1722762 AGCACATT 1722755
Score = 113 bits (124), Expect = 3e-19
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|| || || | |||||| |||| ||||||||||||||| ||||| ||||| || | |||
Sbjct 1722652 TTCTTGTCTAAACCATAAGCAATAGCAGCAGCAGTTGGCTCATTGATAATCCTAAGTACA 1722593
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| ||||||||||| |||| |||||||| || || || | || || |||||||| |||
Sbjct 1722592 TTGAGACCAGCAATGGTTCCAGCATCTTTGGTTGCCTGCCGCTGGGAGTCGTTAAAGTAT 1722533
Query 282452 GCAGGAACAGTAATAACGGCAT 282473
|| || || || | || ||||
Sbjct 1722532 GCTGGCACTGTGACCACCGCAT 1722511
Score = 102 bits (112), Expect = 6e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749
|||||| || ||||| || || | ||| | |||| ||||| ||||| |||||||
Sbjct 1721880 CAAAAACCGTGTTGGTGGGGTTCATAGCAACCTGATTCTTGGCAGCATCACCAATCAATC 1721821
Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809
|||| || || ||||| | ||||| ||| || || || || || ||||| || ||||
Sbjct 1721820 GTTCGGTGTCAGTAAAGGCGACATAGCTTGGTGTGGTTCGGTTGCCCTGATCGTTGGCAA 1721761
Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869
||||||| ||||| || | || | ||||| |||||| | || || || | |||||
Sbjct 1721760 TAATTTCCACTTTTCCGTGCTGGAAGACACCCACACAAGAGTAGGTGGTGCCAAGATCAA 1721701
Query 282870 TACCAATAGCA 282880
| |||| ||||
Sbjct 1721700 TGCCAACAGCA 1721690
>seq98
Length=8690808
Score = 98.7 bits (108), Expect = 7e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 131181 TAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATT 131240
|||| || ||||| ||||| ||||| ||||||||| | ||||| | ||||||||||
Sbjct 6380849 TAGCTACTATAGCTTTTGGAATGGGCATTAATAAAGCTGATGTCCGTAAAGTTATTCATT 6380908
Query 131241 ACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATG 131300
| || ||||| ||| | || ||| ||||| || |||||||| ||||| || |||||||
Sbjct 6380909 ATGGTGCTCCTAAGGAAATGGAATCATATTACCAGGAAATTGGGAGAGCGGGCCGTGATG 6380968
Query 131301 GA 131302
||
Sbjct 6380969 GA 6380970
>seq16
Length=36376318
Score = 95.1 bits (104), Expect = 9e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356
||||| || || |||| || ||||||||||| ||||| || ||| | || |||||| |
Sbjct 27009066 TGTACACTTATCCTGACTGAAGGAGATTCAGCCAAAACTTTGGCTGTTTCAGGCCTTGGT 27009125
Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416
|| |||||||||| | || || |||||||| |||||||||||| | | ||||| |
Sbjct 27009126 GTGGTTGGAAGAGACAAATACGGGGTTTTCCCTCTTAGAGGAAAATTACTCAATGTCCGA 27009185
Query 400417 GATGCTAGTCCTAAA 400431
|| ||| || ||||
Sbjct 27009186 GAAGCTTCTCATAAA 27009200
>seq31
Length=29319519
Score = 93.3 bits (102), Expect = 3e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393
||| || ||||| || || | ||||||||| || ||||||||||||| | | |||||
Sbjct 28681895 TTTGTCTAGACCGTAGGCCAGAGCAGCAGCTGTGGGTTCATTAATAACCCCAAGTACATT 28681954
Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453
|| |||| ||| || ||||| |||||||| ||||| ||||| || | ||||| ||
Sbjct 28681955 CAGTCCAGATATTTGACCAGCATCCTTAGTGGCCTGTCTCTGTGAGTCACTGAAATAAGC 28682014
Query 282454 AGGAACAGT 282462
|||||| ||
Sbjct 28682015 AGGAACTGT 28682023
>seq22
Length=32233543
Score = 89.7 bits (98), Expect = 4e-12
Identities = 153/219 (70%), Gaps = 10/219 (5%)
Strand=Plus/Minus
Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324
||| | || || |||| ||| ||||||| | |||| | ||| | | |||| ||||
Sbjct 15308599 CAAGATAGAAATATCAAAAGTTTCACCACCTAAATCATATATAGCAATAATCATATCTTC 15308540
Query 282325 -GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 282383
| |||| || |||||||| | | ||||||||| || |||||||| |||| |
Sbjct 15308539 AGACTTG-------TCTAGACCATAGGTGAGAGCAGCAGCTGTGGGTTCATTCATAAC-C 15308488
Query 282384 TCAAA-ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 282442
| || ||||| || || ||| || |||||||||||||| | ||| ||||| ||
Sbjct 15308487 TAAAGTACATTCAGTAGAGATATTTGACCAGCATCTTTAGTGGCCTATCTGTGTGAGTCA 15308428
Query 282443 TTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT 282481
|| ||||| |||||||| || || || ||| | || ||
Sbjct 15308427 TTGAAATAAGCAGGAACTGTTATCACAACATTTTTTGCT 15308389
>seq54
Length=15450234
Score = 86.0 bits (94), Expect = 5e-11
Identities = 204/305 (67%), Gaps = 14/305 (5%)
Strand=Plus/Plus
Query 281265 TTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTCAAATT 281324
|||| || ||||| ||| ||||| | |||| || || ||| | || |||| |
Sbjct 14189307 TTTCCAACTCATTCCTAGTATCAATACGCTCTTTAAGTTTTTTGTCTTCCTCAGCAAACT 14189366
Query 281325 CTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT----A 281380
| ||| || ||| |||||| ||||||| |||||| | || || || |
Sbjct 14189367 TCTCAGCATCATTAACCATTCTTTCAATTT---CTTCAG-GTGTCAAGCGGTTTTGGTCA 14189422
Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGCAGTCACATTA 281437
|| ||||| || || || || |||||| ||| ||| || | || || || |
Sbjct 14189423 TTGGTAATTGTGATCTTATT---TTTGTTCCCTGTACCTTTGTCTTCAGCTGTTACCCGA 14189479
Query 281438 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 281497
||||| ||||| |||| | ||||| ||||||||||| || || ||||||| |||||
Sbjct 14189480 AGAATGCCATTCACATCTATTTCAAAAGTGACTTCAATCTGGGGCACCCCTCGGGGAGCA 14189539
Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557
|| || || || || || |||||| |||||| | || ||||| || || ||||
Sbjct 14189540 GGAGGAATTCCAGTCAGATCAAATGTACCCAGAAGGTGGTTGTCTTTTGTCAAGGGTCGT 14189599
Query 281558 TCACC 281562
|||||
Sbjct 14189600 TCACC 14189604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740095354254948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |