Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30] 10,898 sequences; 2,835,250,225 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq120 244 8e-59 seq30 188 5e-42 seq102 125 5e-23 seq98 98.7 7e-15 seq16 95.1 9e-14 seq31 93.3 3e-13 seq22 89.7 4e-12 seq54 86.0 5e-11 >seq120 Length=6988559 Score = 244 bits (270), Expect = 8e-59 Identities = 980/1519 (65%), Gaps = 37/1519 (2%) Strand=Plus/Minus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| || || ||||| || || |||| ||| || || | |||| | ||| || Sbjct 3129718 ATTTGTGATGGTAATCTTGTTTTATTTTCCTGTACTCTTGTCTACAGCAGAAATATTGAG 3129659 Query 281440 AATACCATTGGCATCCAAATC-AAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 281498 |||||||| ||||| || || ||| || |||||| | ||||| || || | | |||| Sbjct 3129658 GATACCATTAGCATC-AATTCTAAAAGTAACTTCAGTCTGAGGAACACCACAGGGTGCAG 3129600 Query 281499 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 281558 | || || ||| || | ||| | || || || ||||| || || | || || Sbjct 3129599 GAGGTATGCCTGTGAATTCAAACTTCCCAAGCAGGTTGTTATCCTTGGTCATGGCTCTTT 3129540 Query 281559 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 281618 ||| || | | || || || ||| || || || |||| || || || || Sbjct 3129539 CACTTTCATATACCTGAATTAGCACACCAGGCTGGTTGTCAGAATTGGTAGTGAAGG-TC 3129481 Query 281619 TGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCA 281677 || ||| ||| |||||| | |||||| | || | ||||| | |||||| Sbjct 3129480 TGTGTTTGCTTAGTAGGAATGATAGTGTTTTGTTTGATGAGGACAGTCATGACTCCACCA 3129421 Query 281678 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 281737 || ||||| | |||| ||||||||||||||||||| | || | | | |||| || Sbjct 3129420 GCAGTTTCAATACCA-GAGAAAGAGGAGTGACATCCAGGAGCAGCAAGTCCTGAACATTC 3129362 Query 281738 TCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 ||| | | ||| ||||| |||| || | || ||||| || |||||||||||| Sbjct 3129361 TCAGACTTGTCACCCGATAGAATGCCTGCCTGGACTGCTGCACCGTAGGCAACAGCTTCA 3129302 Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 281857 ||||| || | | | ||| |||| || |||||||| || | ||||||| ||| Sbjct 3129301 TCAGGGTTGATGCTCTTATTCAGTTCCTTTCCATTGAAGAAGTCCTGCAGAAGTT-TCTG 3129243 Query 281858 AC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 281916 | |||||| ||| ||| || ||||| | | ||||| || || | |||||| || || Sbjct 3129242 AATCTTAGGGATAAGAGTAGAACCTCCCATCAGGACAATGTCGTGGATCTGTGACTTGTC 3129183 Query 281917 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGA 281976 ||| || | |||| | | ||||| || || || ||| | | |||| ||| | Sbjct 3129182 CAGCTTGGCATCCCTAAGTGCCTTTTCTACAGGGTCTAGAGTGCCACGGAACAGGTCAGT 3129123 Query 281977 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAAC 282034 | || ||||| ||| ||| | ||| || || | || || || |||||||| || Sbjct 3129122 ATTCAGCTCTTCAAATCGAGCACGAGT--GATGGAGGTGTAGAAGTCGATTCCTTC--AC 3129067 Query 282035 AAAG--AATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTT 282092 |||| |||||| ||||| | | || || ||| || | || || || || Sbjct 3129066 AAAGGGAATCAATCTCAATACTGGCCTGGGTGCTAGAGGAGAAGTTGCGCTTGGCTGATT 3129007 Query 282093 CACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGCTGATTGATTCAAATCTGTTTTA 282148 |||| || || | || || || ||| | | || | |||| ||| | ||| Sbjct 3129006 CACAAGCAGTGCAGAGATGCCGCAAAGCTCTCTTGTTCTCACTGATG----TCTTTCTTA 3128951 Query 282149 TATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTTCAC 282206 | || ||||| || || | ||| | || | | || | ||| |||| | Sbjct 3128950 TGCTTGTGTTTGAACTCAGTAATGAA--ATGGATGACCATTCAGTTGTTAAAGTCTTTGC 3128893 Query 282207 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 282266 | ||||| | |||| ||| | |||| | |||| | || | |||||| |||| || | Sbjct 3128892 CACCCAAGTGGGTATCTCCAGCTGTAGATTTTACCTCAAAGATTCCATCCTCAATAGTGA 3128833 Query 282267 AAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT 282326 | | |||||| || ||||| |||| |||||||| |||||||| | || Sbjct 3128832 GGATTGACACATCAAAAGTGCCACCTCCCAAGTCAAAAATCAGTACATTTCTCTCAGCTC 3128773 Query 282327 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 282386 | || || || | |||||| |||| |||| |||||||||| ||||| ||||| || | Sbjct 3128772 CAACCTTCTTGTCTAAACCATAAGCAATAGCATCAGCAGTTGGCTCATTGATAATCCTAA 3128713 Query 282387 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 282446 ||||| || |||||||| |||| |||||||| || || || | || || || |||| Sbjct 3128712 GTACATTGAGGCCAGCAATGGTTCCAGCATCTTTGGTTGCCTGCCGCTGGGAGTCATTAA 3128653 Query 282447 AATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTG 282506 | ||||| || || || | || |||| || || || || | || || || Sbjct 3128652 AGTATGCTGGCACGGTGACCACTGCATTGGTAACAGACTTCCCTAGGTATGCCTCTGTGA 3128593 Query 282507 TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA--GAATATTGCTTGGA 282564 ||| ||||| || | | || ||| || || | | |||||| ||| || ||| Sbjct 3128592 TTTCCTTCATCTTTGTCAGAACCATGGAGGACACCTCCTCTGGATAGAAGCTTT-TTGTC 3128534 Query 282565 TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGG 282624 | ||| ||| ||||| | | || | | | |||| | || | || || Sbjct 3128533 TCTCCCTTG-TATTCTACTTGGACCTTGGGCCTGCCAGGATCATTTACCACCATGAAAGG 3128475 Query 282625 CCAATATTTCATATCTGATTGAACA--CTTTGGTCATTAAAATCT-CTACCAATTAATCG 282681 ||| | ||||| || || |||||| | | || ||| | | ||||||| | Sbjct 3128474 CCAGTGCTTCATGTCAGACTGAACAAACATA---CAAACAAACATACGTCCAATTAGACA 3128418 Query 282682 TTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCC 282741 ||| ||||||||| | ||||| || || | ||| | |||| ||||| ||||| || Sbjct 3128417 TTTGGCATCAAAACCCATGTTGGTGGGGTTCATAGCAACCTGATTCTTGGCAGCATCACC 3128358 Query 282742 AATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 282801 ||||| |||| || || ||||| | |||||| ||| || || | || || ||||| Sbjct 3128357 AATCAATCGTTCAGTGTCAGTAAAGGCAACATAGCTTGGTGTGGTTCAGTTGCCCTGATC 3128298 Query 282802 ATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCC 282861 ||| ||||||||||| ||||| |||| || | ||||| |||||| | || || || Sbjct 3128297 ATTGGCAATAATTTCCACTTTTCCATGCTGGAAGACACCCACACAAGAGTAGGTGGTGCC 3128238 Query 282862 TAAATCAATACCAATAGCA 282880 | |||||| |||| |||| Sbjct 3128237 AAGATCAATGCCAACAGCA 3128219 >seq30 Length=29245334 Score = 188 bits (208), Expect = 5e-42 Identities = 673/1035 (65%), Gaps = 29/1035 (3%) Strand=Plus/Plus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| ||| | || |||||||| ||||| | |||||| || |||||||| ||||| || Sbjct 24414692 GCAGAAACACTGAGGATACCATTAGCATCAATATCAAAAGTAACTTCAATCTGAGGAACA 24414751 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCA-GATTATTATTATCTTT 281544 || | ||||| || || ||| | || || |||||| | |||||||| || Sbjct 24414752 CCATGGGGTGCAGGAGGAATGCCTGTGAG-TTCAAGCTTCCCAAGCAGGTTATTATCCTT 24414810 Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604 || | || ||||| || | | || || || || || || || | || Sbjct 24414811 GGTCATGGCTCTCTCACCTTCATATACCTGAATTAGCACACCACGCTGGTTGTCAGGCTA 24414870 Query 281605 AGTTGTAAATACTCTGGATTTTTTACA----AGGAATTGTTGTGTTTCTATCAATAATAT 281660 || || || |||| | ||| || |||||| || ||||||| | || | Sbjct 24414871 GGTAGTGAAGG-TCTG---TGTTTGCATGGTAGGAATGGTAGTGTTTCGTTTGATCAGGG 24414926 Query 281661 TGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGA 281720 ||||| | |||||||||||| | | ||| ||||||||||| |||||||| | || | Sbjct 24414927 CAGTCATGACTCCACCAGCTGTTCCAATACCCAGAGAAAGAGGGGTGACATCCAAGAGCA 24414986 Query 281721 CAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780 | | |||| || ||| | | |||| ||||| ||||| || | |||||||| Sbjct 24414987 ACAAGTCCTGAACATTCTCAGACTTGTCACCAGATAGAATGGCTGCCTGGACAGCAGCAC 24415046 Query 281781 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 281840 |||| ||||||||||||||||| || | | | || |||| || ||||||||||| | Sbjct 24415047 CATAGGCAACAGCTTCATCAGGGTTGATGCTCTTGTTCAGTTCCTTTCCATTGAAAAAGT 24415106 Query 281841 TTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 281899 || ||||| | ||| | ||| || ||||||| || || || || | ||||| || Sbjct 24415107 CTG-CAGAAGCT-TCTGAATCTTGGGGATACGAGTAGAGCCCCCCACCAGGACAATGTCG 24415164 Query 281900 TGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCA 281959 || | |||||| || ||||| || | |||| | | | ||||| || || || ||| Sbjct 24415165 TGGATCTGTGACTTGTCCAGCTTGGCATCCCTAAGAGCCTTTTCTACAGGGTCTAGAGTG 24415224 Query 281960 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATA 282018 | | |||| ||| | | || ||||| ||| ||| | || || || | || | Sbjct 24415225 CCACGGAACAGGTCAGCATTCAGCTCTTCAAATCGAGCACGGGT--GATGGAGGTGTAGA 24415282 Query 282019 A-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077 | ||||||||||| | | ||||||| ||||| | | || || || || | | Sbjct 24415283 AGTCAATTCCTTCATAAAGGGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGCGGG 24415342 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAG-TCTTCGTAAG---GCTTTTGCTGATTGA 282133 | || || |||||||| || || || | || || ||| | || | ||| Sbjct 24415343 TGTGCTTGGCGCGTTCACAAGCAGTGAGGAGATGTTGCACAGCTCTCTTGTCCTCACTGA 24415402 Query 282134 TTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGAT 282191 | ||| | ||| || | ||||| || ||| | ||| | || | || | Sbjct 24415403 T----GTCTTTCTTACGCTTGCATTTGAACTCAGCAATGAA--ATGGTGGACCATTCGGT 24415456 Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 | ||||| ||||| | ||||| | || | ||| | |||| | |||| | || | || Sbjct 24415457 TGTCAAAGTCTTCTTCACCCAAGTGGGTGTCTCCAGCTGTAGATTTTACCTCAAAGATTC 24415516 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 || | |||| || | | | ||| || || ||||| |||| ||||||||| || | Sbjct 24415517 CAGCCTCAATAGTGAGGATTGACACACCAAAAGTGCCACCTCCCACATCAAAAATCAGCA 24415576 Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 |||| | || | | || || | |||| | |||| ||||||||||||||| | Sbjct 24415577 CATTTCTCTCAGCTCCAACCTCCTTGTCTAAACCAAAAGCAATAGCAGCAGCAGTTGGCT 24415636 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 |||| ||||| || | ||||| ||||||||| | ||| ||| |||| || || || | Sbjct 24415637 CATTGATAATCCTAAGTACATTGAGACCAGCAGTGATTCTAGCACCTTTGGTTGCCTGCC 24415696 Query 282432 TTTGTGAATCGTTAA 282446 || || ||||||| Sbjct 24415697 CCTGGGAGTCGTTAA 24415711 Score = 95.1 bits (104), Expect = 9e-14 Identities = 176/258 (68%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 282623 GGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGT 282682 ||||||| ||||| || || |||||| |||| ||| | ||| ||| ||| Sbjct 24415876 GGCCAATGCTTCATGTCAGACTGAACAACAGCATCATCAAACCTACATCCAGTTAGACGT 24415935 Query 282683 TTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCA 282742 || |||||||| || ||||| || || ||| | |||| ||||| ||||| ||| Sbjct 24415936 TTGACATCAAAATCCGTGTTGGTGGGGTTCGTAGCAACCTGATTCTTGGCAGCATCACCA 24415995 Query 282743 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 282802 ||| |||| || || ||||| || | ||| ||| || || | | || ||||| Sbjct 24415996 ATC----GTTCGGTGTCAGTAAAGGAGATATAGCTTGGTGTGGTTTGGTGGCCCTGATCG 24416051 Query 282803 TTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCT 282862 | ||||||||||| ||||| |||| || | ||||| |||||| | || || || Sbjct 24416052 CTGGCAATAATTTCCACTTTCCCATGCTGGAAGACACCCACACAAGAGTAGGTGGTGCCA 24416111 Query 282863 AAATCAATACCAATAGCA 282880 | |||||| |||| |||| Sbjct 24416112 AGATCAATGCCAACAGCA 24416129 >seq102 Length=8212846 Score = 125 bits (138), Expect = 5e-23 Identities = 363/548 (66%), Gaps = 18/548 (3%) Strand=Plus/Minus Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 |||||||| ||||||||||||||||| || | | | ||| |||| || ||||||||| Sbjct 1723293 GCACCATAGGCAACAGCTTCATCAGGGTTGATGCTCTTATTCAGTTCCTTTCCATTGAAA 1723234 Query 281837 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895 || | ||||| | ||| | ||| || ||||||| || || || || | ||||| Sbjct 1723233 AAGTCCTGTAGAAGCT-TCTGAATCTTGGGGATACGAGTAGAACCCCCCACCAGGACAAT 1723175 Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955 || || | |||||| |||||||| || | |||| | | | ||||| || || || || Sbjct 1723174 GTCGTGGATCTGTGACTTATCCAGCTTGGCATCCCTAAGAGCCTTTTCTACAGGGTCTAG 1723115 Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT- 282014 | | | |||| ||| | | || ||||| ||| ||| | || || || | Sbjct 1723114 AGTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAATCGAGCACGGGT--GATGGAGGTG 1723057 Query 282015 TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 282073 || || || |||||||| | | ||||||| ||||| | | || || ||| || Sbjct 1723056 TAGAAGTCGATTCCTTCATAAAGGGAATCAATCTCAATACTGGCCTGGGTGCTAGAGGAG 1722997 Query 282074 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGA 282129 || | || || || |||||||| || || | || | || | || ||| | || | Sbjct 1722996 AGGGTGCGCTTGGCTCGTTCACAAGCAGTGCGGAGACGCCGCACAGCTCTCTTGTTCTCA 1722937 Query 282130 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGA 282187 |||| ||| | |||| || | ||||| || ||| | ||| | || | Sbjct 1722936 CTGAT----GTCTTTCTTATGCTTGCGTTTGAATTCAGCAATGAA--ATGGTTGACCATT 1722883 Query 282188 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 282247 || |||||||| |||||||| ||||| | || | ||| | |||| | |||| | || Sbjct 1722882 CGGTTATCAAAGTCTTCACCACCCAAGTGGGTGTCTCCAGCTGTAGATTTTACCTCAAAG 1722823 Query 282248 AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307 | |||||| |||| || | | | |||||| || ||||| |||| ||||||||| Sbjct 1722822 ATTCCATCCTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCCAAATCAAAAATC 1722763 Query 282308 AGTACATT 282315 || ||||| Sbjct 1722762 AGCACATT 1722755 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || || | |||||| |||| ||||||||||||||| ||||| ||||| || | ||| Sbjct 1722652 TTCTTGTCTAAACCATAAGCAATAGCAGCAGCAGTTGGCTCATTGATAATCCTAAGTACA 1722593 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||||||||| |||| |||||||| || || || | || || |||||||| ||| Sbjct 1722592 TTGAGACCAGCAATGGTTCCAGCATCTTTGGTTGCCTGCCGCTGGGAGTCGTTAAAGTAT 1722533 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || || || | || |||| Sbjct 1722532 GCTGGCACTGTGACCACCGCAT 1722511 Score = 102 bits (112), Expect = 6e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||||| || ||||| || || | ||| | |||| ||||| ||||| ||||||| Sbjct 1721880 CAAAAACCGTGTTGGTGGGGTTCATAGCAACCTGATTCTTGGCAGCATCACCAATCAATC 1721821 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 |||| || || ||||| | ||||| ||| || || || || || ||||| || |||| Sbjct 1721820 GTTCGGTGTCAGTAAAGGCGACATAGCTTGGTGTGGTTCGGTTGCCCTGATCGTTGGCAA 1721761 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 ||||||| ||||| || | || | ||||| |||||| | || || || | ||||| Sbjct 1721760 TAATTTCCACTTTTCCGTGCTGGAAGACACCCACACAAGAGTAGGTGGTGCCAAGATCAA 1721701 Query 282870 TACCAATAGCA 282880 | |||| |||| Sbjct 1721700 TGCCAACAGCA 1721690 >seq98 Length=8690808 Score = 98.7 bits (108), Expect = 7e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131181 TAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATT 131240 |||| || ||||| ||||| ||||| ||||||||| | ||||| | |||||||||| Sbjct 6380849 TAGCTACTATAGCTTTTGGAATGGGCATTAATAAAGCTGATGTCCGTAAAGTTATTCATT 6380908 Query 131241 ACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATG 131300 | || ||||| ||| | || ||| ||||| || |||||||| ||||| || ||||||| Sbjct 6380909 ATGGTGCTCCTAAGGAAATGGAATCATATTACCAGGAAATTGGGAGAGCGGGCCGTGATG 6380968 Query 131301 GA 131302 || Sbjct 6380969 GA 6380970 >seq16 Length=36376318 Score = 95.1 bits (104), Expect = 9e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| || || |||| || ||||||||||| ||||| || ||| | || |||||| | Sbjct 27009066 TGTACACTTATCCTGACTGAAGGAGATTCAGCCAAAACTTTGGCTGTTTCAGGCCTTGGT 27009125 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 || |||||||||| | || || |||||||| |||||||||||| | | ||||| | Sbjct 27009126 GTGGTTGGAAGAGACAAATACGGGGTTTTCCCTCTTAGAGGAAAATTACTCAATGTCCGA 27009185 Query 400417 GATGCTAGTCCTAAA 400431 || ||| || |||| Sbjct 27009186 GAAGCTTCTCATAAA 27009200 >seq31 Length=29319519 Score = 93.3 bits (102), Expect = 3e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 ||| || ||||| || || | ||||||||| || ||||||||||||| | | ||||| Sbjct 28681895 TTTGTCTAGACCGTAGGCCAGAGCAGCAGCTGTGGGTTCATTAATAACCCCAAGTACATT 28681954 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 || |||| ||| || ||||| |||||||| ||||| ||||| || | ||||| || Sbjct 28681955 CAGTCCAGATATTTGACCAGCATCCTTAGTGGCCTGTCTCTGTGAGTCACTGAAATAAGC 28682014 Query 282454 AGGAACAGT 282462 |||||| || Sbjct 28682015 AGGAACTGT 28682023 >seq22 Length=32233543 Score = 89.7 bits (98), Expect = 4e-12 Identities = 153/219 (70%), Gaps = 10/219 (5%) Strand=Plus/Minus Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 ||| | || || |||| ||| ||||||| | |||| | ||| | | |||| |||| Sbjct 15308599 CAAGATAGAAATATCAAAAGTTTCACCACCTAAATCATATATAGCAATAATCATATCTTC 15308540 Query 282325 -GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 282383 | |||| || |||||||| | | ||||||||| || |||||||| |||| | Sbjct 15308539 AGACTTG-------TCTAGACCATAGGTGAGAGCAGCAGCTGTGGGTTCATTCATAAC-C 15308488 Query 282384 TCAAA-ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 282442 | || ||||| || || ||| || |||||||||||||| | ||| ||||| || Sbjct 15308487 TAAAGTACATTCAGTAGAGATATTTGACCAGCATCTTTAGTGGCCTATCTGTGTGAGTCA 15308428 Query 282443 TTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT 282481 || ||||| |||||||| || || || ||| | || || Sbjct 15308427 TTGAAATAAGCAGGAACTGTTATCACAACATTTTTTGCT 15308389 >seq54 Length=15450234 Score = 86.0 bits (94), Expect = 5e-11 Identities = 204/305 (67%), Gaps = 14/305 (5%) Strand=Plus/Plus Query 281265 TTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTCAAATT 281324 |||| || ||||| ||| ||||| | |||| || || ||| | || |||| | Sbjct 14189307 TTTCCAACTCATTCCTAGTATCAATACGCTCTTTAAGTTTTTTGTCTTCCTCAGCAAACT 14189366 Query 281325 CTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT----A 281380 | ||| || ||| |||||| ||||||| |||||| | || || || | Sbjct 14189367 TCTCAGCATCATTAACCATTCTTTCAATTT---CTTCAG-GTGTCAAGCGGTTTTGGTCA 14189422 Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGCAGTCACATTA 281437 || ||||| || || || || |||||| ||| ||| || | || || || | Sbjct 14189423 TTGGTAATTGTGATCTTATT---TTTGTTCCCTGTACCTTTGTCTTCAGCTGTTACCCGA 14189479 Query 281438 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 281497 ||||| ||||| |||| | ||||| ||||||||||| || || ||||||| ||||| Sbjct 14189480 AGAATGCCATTCACATCTATTTCAAAAGTGACTTCAATCTGGGGCACCCCTCGGGGAGCA 14189539 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 || || || || || || |||||| |||||| | || ||||| || || |||| Sbjct 14189540 GGAGGAATTCCAGTCAGATCAAATGTACCCAGAAGGTGGTTGTCTTTTGTCAAGGGTCGT 14189599 Query 281558 TCACC 281562 ||||| Sbjct 14189600 TCACC 14189604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740095354254948