Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30] 10,898 sequences; 2,835,250,225 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq36 96.9 6e-15 >seq36 Length=22080993 Score = 96.9 bits (106), Expect = 6e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438 || || |||||||||| | |||||||||| | ||||||||||| || |||||||| || Sbjct 10727653 GCTTTGTGGTGGTACTTTGTATCTAAAGGAGTTGAATACTTAGACACCGTGTTTTTTATC 10727712 Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498 || ||||| || || || || || || || || |||||||| | ||| ||||| Sbjct 10727713 CTGAGGAAGAAAAACAACCAAGTGTCTTTCCTTCATGTGTATCATCACTGTACAATGTTC 10727772 Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || | | ||| | || ||||| ||| ||||||| || || Sbjct 10727773 ACCCTCTGGTGGATTGGAATTAAGTGGGTTGCAGGGGGCCA 10727813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903288132809280