Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30] 10,898 sequences; 2,835,250,225 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq83 86.0 1e-11 >seq83 Length=10591344 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 |||||||||||| ||| ||||| || |||||||| ||| |||| | || || ||| Sbjct 7356281 GTAGCTTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGG 7356222 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAAT 131965 || ||||| || ||| |||||||||| ||| |||| |||||| Sbjct 7356221 CTCAAGAAACGGGGACTGATGCCTGGCCTCACATTTTCCAAT 7356180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186647084586978