Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30] 10,898 sequences; 2,835,250,225 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq57 288 8e-73 seq6 167 2e-36 seq116 159 3e-34 seq175 136 3e-27 seq63 136 3e-27 seq83 109 4e-19 seq8 107 2e-18 seq157 104 2e-17 seq56 86.0 5e-12 >seq57 Length=15126812 Score = 288 bits (318), Expect = 8e-73 Identities = 610/900 (68%), Gaps = 29/900 (3%) Strand=Plus/Plus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| | ||||| || ||||| ||||| || ||||| |||||||| ||||| ||| Sbjct 10749436 TTTGTTATCTTTCCTATGCAATAGCATGATATCTGGCAGATGTACAAGAAAGCCAGGGCC 10749495 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCAT 43817 || || |||||||| || | || ||| | | || ||| | ||||| ||| || Sbjct 10749496 TCCTTCTGGACAGCTGAGGTGGTAGATCTTTCCAAGGACGTTCAGCAC--TGGGAAGCCC 10749553 Query 43818 TAAAACCACAAGAAAAACAT--TTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGA 43875 | || || |||||||| || ||||||||| | ||| |||| || |||||||| || || Sbjct 10749554 TGAAGCCTGAAGAAAAAGATACTTTATATCTCTCGTTCTGGCTTTCTTTGCTGCCAGTGA 10749613 Query 43876 CGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGC 43935 || ||||| |||||||| |||| || ||| |||||||||||| | ||||||| Sbjct 10749614 TGGTATAGTAAATGAAAACATGGTGGAGCGATTTAGCCAAGAAGTTCAAATTACAGAAGC 10749673 Query 43936 ACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCT 43995 || ||||| |||||||| ||||||||||| || || || ||||| | ||||||||||| Sbjct 10749674 CCGCTGTTTCTATGGGTTCCAAATTGCCATGGATAACATACATTCTGGGATGTACAGTCT 10749733 Query 43996 TCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGA 44055 || || || | |||| ||||||| | || | | | | || ||||| || || Sbjct 10749734 CCTTATTGACATTTACACAAAAGATGTCAAAGAAAGGGACTTCCTCTTCAATGCCATTGA 10749793 Query 44056 AACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGA---TAAATTCAAA 44112 || | ||| || | | || |||||| | |||| |||| | || | | Sbjct 10749794 AAGGATGCCTTGTATGA---AGAAGGCAGACGTGACCCTGTGTTGGATTGTGGATAAAGA 10749850 Query 44113 TGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGG 44172 | | | | |||||||| |||| || ||||| | || | ||| | ||||||| || Sbjct 10749851 GGCTACCTATGGAGAACATGTTGTAGCTTTTGCTGCTGCGAAAGAAA---TCTTTTCTGG 10749907 Query 44173 ATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTC 44232 || ||||| | ||||||||| | ||||||| || |||||||||| | || ||||| Sbjct 10749908 TTCTTTTGCATCAATATTTTGGCTCAAGAAACAGGGACTGATGCCTGGCCTCACATTTTC 10749967 Query 44233 AAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGG 44292 | |||| | || ||||| ||||| || ||||| || |||||| | ||| || | | Sbjct 10749968 CAGTGAGCTTATTAGTCGAGATGAGGGTTTACA-TGTGATTTTACCTGCCTGGTGTTCAA 10750026 Query 44293 ATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGT 44352 | || | | || || || | | || | | | || || |||| | || || Sbjct 10750027 GCACCTGGTATAC---AAACCATTAGAGTAGTGAGTCAAGGAAATAATTGTCAATGCTGT 10750083 Query 44353 AAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TG 44411 | |||||| | || || | ||| || || ||||| || || || |||||||| || Sbjct 10750084 CAGAATAGAAGAGGAGTTCCTCACAGAGGCCTTGCCTGTGAAGTTCATTGGAATGAATTG 10750143 Query 44412 AACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTT 44471 || ||| ||||| || | ||||||| | ||||| | | | ||||| |||||| Sbjct 10750144 CAC-TTTAATGAAGCAGAACATTGAATTTGTGGCAGACAGGCTTATGCTGGAAATGGGTT 10750202 Query 44472 GCGATAAACACTATATT----GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527 | |||| || || ||| ||||||| ||||| || ||||| | |||||| | Sbjct 10750203 ----TTAACAAGATTTTCAGAGTAGAAAACCCATTTGACTTCATGGAGATTATTTCACTA 10750258 Query 44528 GAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 ||||| || || ||||| | ||| || | || || || | ||| | ||||| || ||| Sbjct 10750259 GAAGGAAAGACTAACTTCTCTGAGAAGAGAGTAGGTGAGCACCAGAGGATGGGAGTGATG 10750318 >seq6 Length=52350410 Score = 167 bits (184), Expect = 2e-36 Identities = 508/769 (66%), Gaps = 27/769 (4%) Strand=Plus/Plus Query 43829 GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAAT 43888 ||||||| |||| |||| || |||| ||||||||||| || || | | ||| ||| Sbjct 1186701 GAAAAAC--TTTACATCTCACGTCCTGGCTTTTTTTGCTGCCAGTGATGACACAGTGAAT 1186758 Query 43889 GAAAATTTGG-TTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTA 43947 ||||| |||| ||| | |||| |||||||||||| | ||||||| || ||||| Sbjct 1186759 GAAAACTTGGCGGAGT-GATTTGGCCAAGAAGTTCAAATTACAGAAGCTCGCTGTTTCAT 1186817 Query 43948 TGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATAC 44007 |||||| |||| |||||| ||||| || | ||| || ||||||||||| || | || || Sbjct 1186818 TGGGTTCCAAACTGCCATTGAAAACATACGTTCTGAGATGTACAGTCTCCTTACTGACAC 1186877 Query 44008 GTACATCAAAGATGGGCACGAGA-AGCATCGATTGTTTAATGCGATAGAAACAGTACCTG 44066 | || |||||| | || | | || ||| | ||||| || ||||| | | | Sbjct 1186878 TTCTATTAAAGATTCCAAAGAAAGGGAATTCCTTG-TCAATGCCATTGAAACGATGCTTC 1186936 Query 44067 CGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAATGATTCTTTTG 44123 | | | | | |||||| ||||| | ||||| | | | | | | || Sbjct 1186937 CTGTGA---AGGAGGCAGACGGGGCCTTGCGTTGGATTGCAGACAAAGAGGCGACCAATG 1186993 Query 44124 GAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGG 44183 |||||| ||| || |||| | ||||||||| || ||||||| || || ||||| Sbjct 1186994 GAGAACATGCTGTAGCTCTTGCTGCTGTGGAAGGAATCATCTTTTCTGGTTCTTTTGCAC 1187053 Query 44184 CCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAA 44243 | | ||| ||| | | ||||| || |||||||||| | || ||||| |||||| | | Sbjct 1187054 CAACATTCTGGCTCAGGAAACAGGGACTGATGCCTGGCCTCACATTTTCCAATGAGCTTA 1187113 Query 44244 TAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAG 44303 | |||| ||||| || |||| || |||||||| ||| || | || | || || Sbjct 1187114 TTAGTCAAGATGAGGGTCTACACTGTGATTTTGCCTGCCTGAT-GTTCAAGCACTTGG-T 1187171 Query 44304 ACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAAC 44363 || | || || ||| || | | | || || |||| | || || | ||||||| Sbjct 1187172 AC-ACAAACCATCAGAGCAGCGAGTCAAGGAAATAATTGTCAATGCTGTCAGGATAGAAT 1187230 Query 44364 AAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGAACTTTTGATG 44422 | || | | ||| ||| || ||||| || | || |||| || || || ||| ||| Sbjct 1187231 AGGAGATCTTCACAGAAGCCTTGCCTGTGAAGCTCATTGGAACAAATTGTAC-TTTAATG 1187289 Query 44423 AACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACAC 44482 || || || ||||||| | ||||| | | | ||||||| || | |||| Sbjct 1187290 AAGCAGTACATTGAATTTGTGGCAGACAGGCTTATACTGGAACTCAATT----TTAACAA 1187345 Query 44483 TATATT----GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAAC 44538 || || ||| ||| | ||||| || | ||| ||||||| ||||| || || Sbjct 1187346 GATTTTCAGAGTAGAAATATCATTTGACTTCAGGGAGAATATTTTACCAGAAGGAAAGAC 1187405 Query 44539 AAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 ||| |||| || | || ||||| |||||| | ||||| || ||| Sbjct 1187406 TAAC--AGTTGAGAATAGAGTAGGAGAGTATCAGAGGATGGGAGTGATG 1187452 >seq116 Length=7179089 Score = 159 bits (176), Expect = 3e-34 Identities = 305/445 (69%), Gaps = 6/445 (1%) Strand=Plus/Plus Query 77241 TCGCTCCCTCTCGTGCCAGCCGGTCGGCCTCCTCATTGCCTTTGTATCCTGCGTGTCCTG 77300 ||||||| || | |||| | ||| || || ||| |||| |||||| ||| || | Sbjct 3710926 TCGCTCCTTCACTAGCCAATCTGTCAGCTTCTTCACTGCCCACAAATCCTGAGTGACCAG 3710985 Query 77301 GGATGTGCAGCCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCAT 77360 | ||||||| ||| || ||| || |||| | ||||||| ||| ||||| | Sbjct 3710986 GAATGTGCATCCACTGAATGTCCCTGCCCTGGGTGAGCTCATCCAGCTCCATGAAGTCCT 3711045 Query 77361 CCTTGTTGACAACTGACCCTCCGCCATGCAGC--CTCCAGCCGTTCTGCTTCCAGTTCTT 77418 ||||||||| || | | | | | | | ||||| || |||| ||||||| | Sbjct 3711046 CCTTGTTGATCAC--ATCTTTCCCAGTACTTGTTCTCCACCCATTCTTCTTCCAGCCTTG 3711103 Query 77419 AACCCACTTAGTCACACCATTGATGGTGAACATGCTGTCTGTGTAGACGACCAGCTTCTT 77478 |||||| ||||| | ||||||||||||||||||||||||||||| | |||||||| | Sbjct 3711104 AACCCAGTTAGTTATCCCATTGATGGTGAACATGCTGTCTGTGTATAGCACCAGCTTGCT 3711163 Query 77479 GATTTTGTTCTCCTGAGCTTGTTGCAGT-GCTTTGGATGCAGCCTGGATTTCAGCGCGCT 77537 ||| || | ||| ||||||| |||| |||||| | || || ||||| || || | || Sbjct 3711164 GATGTTCTGAGCCTTTGCTTGTT-CAGTGGCTTTGCAGGCTGCATGGATCTCTGCTCTCT 3711222 Query 77538 GGTTTGTCTGTTGCCCCACAAGTCGCTCTGCAACATTAAGCGGGTGATTATAACCCCAAT 77597 ||||||||||| || ||||| | | || | ||||| ||||| | Sbjct 3711223 GGTTTGTCTGTCATCCAGGAAGTCTAATGCCTAGGTTTAAAGGGTGGCCTGGCCCCCAGT 3711282 Query 77598 ATACGCCAATGCCAGCTCGGGCTTGTTTCTGTCCGTTTGATAAGCAACAGCCGTCAGTGT 77657 | || ||||| |||||||| ||||| | | || || | || ||||| || |||| Sbjct 3711283 AAACACCAATTCCAGCTCGAGCTTGCATTCGCCCATTACTGGAACAGCAGCCATCCGTGT 3711342 Query 77658 AGACCACCACGGCGTCACCCATGTA 77682 |||| ||||| |||||||| || Sbjct 3711343 AGACAACCACCAATTCACCCATATA 3711367 >seq175 Length=2612143 Score = 136 bits (150), Expect = 3e-27 Identities = 277/409 (68%), Gaps = 12/409 (3%) Strand=Plus/Plus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 |||||| | |||||||| || || | ||| || ||| | ||||| || |||| ||| | Sbjct 1472962 TTTGTCATTTTTCCAATCCAGTACCCTGATATTTGGAAGATGTATAAGCAAGCCCAGACA 1473021 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTA 43819 || || ||||||||||| || |||| || | || || | | | |||| || | Sbjct 1473022 TCCTTCTGGACAGCAGAGGAGCTTGACTTATCAAAGGATCTCCCTTACTGGAACGCGCTT 1473081 Query 43820 AAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGG 43879 |||||| | | || ||||||| || | || || |||||||| | ||||| | Sbjct 1473082 AAACCAGATAAGAAGAATTTTATCTCCCACATCTTAGCCTTTTTTGCAACCAGCGATGAA 1473141 Query 43880 ATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGA 43939 || || |||||||||||||| || || | || || || | |||| || | Sbjct 1473142 ATTGTAAATGAAAATTTGGTAGAGCGCATT----AGGACGTGCACGTTTCAGAGGCTCAC 1473197 Query 43940 TGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTG 43999 ||||| ||||| ||| | ||| ||| || ||| ||| || || || ||||| | ||| Sbjct 1473198 TGTTTCTATGGCTTTTAGATTTTCATGGAGAATGCTCACTCAGAGATATACAGCTTACTG 1473257 Query 44000 ATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGA----TTGTTTAATGCGATAGA 44055 |||||| | ||||||| |||| | | ||||| | || || ||||| | || || Sbjct 1473258 ATAGATGCTTACATCAGAGAT---CCCAAGAAG-AGAGAGTTTTTATTTAACACAATTGA 1473313 Query 44056 AACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATA 44104 |||||| | | |||| | |||||||| |||||| | |||||||| Sbjct 1473314 AACAGTGCTATCTGTTAAGAAAAAAGCAGATTGGGCCTTGCAATGGATA 1473362 >seq63 Length=13740492 Score = 136 bits (150), Expect = 3e-27 Identities = 244/351 (70%), Gaps = 14/351 (4%) Strand=Plus/Plus Query 77216 TCATTC--TCTTTAATGTACGGCTTTGTCGCTCCCTCTCGTGCCAGCCGGTCGGCCTCCT 77273 |||||| |||| || || |||||| |||| |||| |||| | ||| || || | Sbjct 10156760 TCATTCAATCTTCAA---ACCGCTTTG---CTCCTTCTCTAGCCAATCTGTCAGCTTCTT 10156813 Query 77274 CATTGCCTTTGTATCCTGCGTGTCCTGGGATGTGCAGCCAGACAACCTCCAGCTCCAAAT 77333 ||||||| |||||| ||| ||||| ||||||| ||| || ||| || Sbjct 10156814 CATTGCCCACAAATCCTGAGTGACCTGGAATGTGCATCCACTGAATGTCCCTGCCCTGGG 10156873 Query 77334 TGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGA---CAACTGACCCTCCGCCATGCA 77390 |||| | ||||||| || ||| | |||||||||| || || ||| | | || Sbjct 10156874 TGAGCTCATCCAGCTCCACGAAGACCTCCTTGTTGATCACATCTTTCCCAGCACT-TGTT 10156932 Query 77391 GCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAGTCACACCATTGATGGTGAACA 77450 ||||| || |||| ||||||| | |||||| ||||| | |||||||||||| || Sbjct 10156933 --CTCCACCCATTCTTCTTCCAGCCTTGAACCCAGTTAGTTATCTCATTGATGGTGAGCA 10156990 Query 77451 TGCTGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCTGAGCTTGTTGCAGTGCTT 77510 ||||||||||||| | |||||||| |||| || | ||| ||||||| | |||| Sbjct 10156991 TGCTGTCTGTGTATAGCACCAGCTTGCTGATGTTCTGAGCCTTTGCTTGTTCAATGGCTT 10157050 Query 77511 TGGATGCAGCCTGGATTTCAGCGCGCTGGTTTGTCTGTTGCCCCACAAGTC 77561 | | || || ||||| || || | ||||||||||||| | || ||||| Sbjct 10157051 TTCAGGCTGCATGGATCTCTGCTCTCTGGTTTGTCTGTCGTCCAGGAAGTC 10157101 >seq83 Length=10591344 Score = 109 bits (120), Expect = 4e-19 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 |||||||||||| | ||||||| || ||||| |||||||| ||||||||||| ||||| Sbjct 7358240 CAAGAAGTTCAAATTACAGAAGCCCGCTGTTTCTATGGGTTCCAAATTGCCATGGAAAAC 7358181 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 || ||||| || ||||||||||| || || || || || || |||||| Sbjct 7358180 ATACATTCCGAGATGTACAGTCTCCTTATTGACACTTATATTAAAGAT 7358133 >seq8 Length=49872541 Score = 107 bits (118), Expect = 2e-18 Identities = 283/432 (66%), Gaps = 4/432 (1%) Strand=Plus/Minus Query 47216 GTGTTGCAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGAC 47275 ||| | || || |||||||| || | ||||| || ||| | |||| | || || ||| Sbjct 36042153 GTGCTCCAGTTCTTAGGACTCTACAAGAAATCTGGAAAACTTGTATTCTTGGGCTTGGAC 36042094 Query 47276 AATGCAGGAAAAACGGCATTACTCCACATGCTCAAATACAATTGCATGAAAGAGCATAAC 47335 |||||||| ||||| | | || |||||||||||| || | | || ||||| Sbjct 36042093 AATGCAGGCAAAACCACTCTGCTTCACATGCTCAAAGACGACAGACTGGGCCAGCATGTT 36042034 Query 47336 CCTACATTACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCACATTT 47395 || || |||| || || || ||| | | ||||||||||| || || |||| ||| ||| Sbjct 36042033 CCCCCACTACACCCCACATCAGAAGAGTTGACAATTGCTGGAATGACTTTTACCACTTTT 36041974 Query 47396 GATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGTTGAT 47455 ||| | || || || ||||| || | | ||| |||||||| | | | | || || Sbjct 36041973 GATCTTGGTGGGCATGAGCAAGCACGGCGGGTTTGGAAAAATTATCTCCTAGCCATTAAT 36041914 Query 47456 GCTATAGTTTATATTGTAGACTGTGCAGATTTGACTAGACTGACAGAGGCAAAAATCGAA 47515 | || || | | || |||||||||||| || | || | || | ||||| || Sbjct 36041913 GGGATTGTCTTCTTGGTGGACTGTGCAGATCATCCTTGCCTCATGGAATCCAAAATTGAG 36041854 Query 47516 TTCGAT----GCGTTGTTAAACGATGAACTGTTACACGATGTTCCTATTTTAGTGTTGGG 47571 || || || || | | |||||| || | |||| || || | | ||||| Sbjct 36041853 CTCAATGAAGGCATTAATGACTGATGAAACAATATCCAATGTGCCAATCCTTATCTTGGG 36041794 Query 47572 CAATAAAATCGACAAACAAAACGCGATAGGAGAAGTTGAACTTCGCCATATATTTGGAAT 47631 || ||||| |||| | | | || || | |||| |||| || | |||||||| | Sbjct 36041793 AAACAAAATTGACAGAACAGATGCAATCAGTGAAGAAAAACTCCGTGAGATATTTGGGCT 36041734 Query 47632 ATACGGACAAAC 47643 || ||||| || Sbjct 36041733 TTATGGACAGAC 36041722 >seq157 Length=3699887 Score = 104 bits (114), Expect = 2e-17 Identities = 159/218 (73%), Gaps = 13/218 (6%) Strand=Plus/Plus Query 77334 TGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGA---CAACTGACCCTCCGCCATGCA 77390 |||| | ||||||| ||||||||| | |||||||| || || ||| | | || Sbjct 1008907 TGAGCTCATCCAGCTCCATAAAGTCCTTCTTGTTGATCACATCTTTCCCAGCACT-TGTT 1008965 Query 77391 GCCTCCAGCCGTTCTGCTTCCAGTTCTT-AACCCACTTAGTCACACCATTGATGGTGAAC 77449 ||||| || |||| |||| | ||| |||||| ||||| | ||||||||||||| | Sbjct 1008966 --CTCCACCCATTCT---TCCA-TCCTTGAACCCAGTTAGTTATCCCATTGATGGTGAGC 1009019 Query 77450 ATGCTGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCTGAGCTTGTTGCAGT-GC 77508 |||||||||||||| | |||||||| |||| || | ||| ||||||| || | || Sbjct 1009020 ATGCTGTCTGTGTATAGCACCAGCTTGCTGATGTTCTGAGCCTTTGCTTGTT-CATTGGC 1009078 Query 77509 TTTGGATGCAGCCTGGATTTCAGCGCGCTGGTTTGTCT 77546 |||| | || | ||||| || || | |||||||||| Sbjct 1009079 TTTGCAGGCTACATGGATCTCTGCTCTTTGGTTTGTCT 1009116 >seq56 Length=15139244 Score = 86.0 bits (94), Expect = 5e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| | Sbjct 9285946 AAAATCCTTTTGATTTTATGGAAAACATTTCTTTAGAAGGAAAAACAAATTTCTTTGAGA 9286005 Query 44553 AACGCGTTGGAGAATATCAGCG 44574 |||| ||| ||| || ||||| Sbjct 9286006 AACGAGTTTCAGAGTACCAGCG 9286027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397403210142490