Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30] 10,898 sequences; 2,835,250,225 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 2e-14 >seq3 Length=68754498 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| || || ||||||| |||||||| || |||||| || || || || || Sbjct 19123001 CTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAAGTTGCTACATTTGATGGTTCC 19123060 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || |||| || || |||||| ||| || | ||| |||||||||||||| || || || Sbjct 19123061 CAGGTTCTGCTGATTGCTCTTCCGGTTACAGGAATCTTTGTAGAGCATGTACGGGGTGCC 19123120 Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA 111419 |||||| ||||| || | || || || | ||||| Sbjct 19123121 CGTCTCTGTCTGCGACTCGATGATGGCATACCAAA 19123155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627946446340800