Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30]
10,898 sequences; 2,835,250,225 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq58 161 2e-34
seq4 161 2e-34
seq7 158 3e-33
seq3 158 3e-33
seq93 154 4e-32
seq89 152 1e-31
seq44 150 4e-31
seq14 149 1e-30
seq73 136 9e-27
seq57 131 4e-25
seq138 125 2e-23
seq2 125 2e-23
seq37 123 6e-23
seq116 120 7e-22
seq1 118 3e-21
seq42 102 2e-16
seq45 98.7 2e-15
seq5 96.9 8e-15
seq10898 95.1 3e-14
seq87 87.8 4e-12
>seq58
Length=14941408
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || || ||||| | ||||| | |||||| || | ||||||
Sbjct 5525683 ACGAAGTCTCAGTACAAGATGAAGGGTGGACTTCTTTTGAATATTGTAGTCAGACAAAGT 5525742
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||||||| || ||||| ||||| ||||| | || || || || || ||||| ||
Sbjct 5525743 ACGCCCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCC 5525802
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||| || ||||| |||| ||| || || |
Sbjct 5525803 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAG 5525862
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| ||||| ||||| | ||||| | ||| | |||||
Sbjct 5525863 CGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 5525904
>seq4
Length=53591480
Score = 161 bits (178), Expect = 2e-34
Identities = 160/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || || ||||| || ||||||| |||||| || | ||||||
Sbjct 13584073 ACGAAGTCTCAGCACAAGATGAAGGGTGGACTCCTTTTGGATATTGTAGTCAGACAAAGT 13584014
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| | ||||||| || ||||| ||||| ||||| || | || || || || ||||| ||
Sbjct 13584013 ACGCTCATCTTCCAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCC 13583954
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||| || |||||||||| ||| || || |
Sbjct 13583953 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAACATCAAG 13583894
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|||||| ||||| ||| | | |||||
Sbjct 13583893 CGTGATGGTCTTCCCCATAAGGGTTTT 13583867
>seq7
Length=50527172
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || || ||||| || ||||| | |||||| || | ||||||
Sbjct 41286047 ACGAAGTCTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTAGTCAGACAAAGT 41286106
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||||||| || ||||| ||||| ||||| | || || || || || ||||| ||
Sbjct 41286107 ACGCCCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCC 41286166
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||| || ||||| |||| ||| | || |
Sbjct 41286167 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAGCCTCGAG 41286226
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| ||||| | ||||| | ||| | |||||
Sbjct 41286227 GGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 41286268
>seq3
Length=68754498
Score = 158 bits (174), Expect = 3e-33
Identities = 159/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || || ||||| | ||||| | |||||| || | |||||
Sbjct 46699771 ACGAAGTCTCAGTACAAGATGAAGGGTGGACTTCTTTTGAATATTGTAGTCAGACAAAGA 46699712
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||||||||||| || ||||| ||||| ||||| |||| || || || || ||||| ||
Sbjct 46699711 ACTCCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCC 46699652
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| || || |||||||| ||| ||| ||| || ||||| |||| ||| || || |
Sbjct 46699651 TTCTTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCAAG 46699592
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|||||| ||||| ||||| | |||||
Sbjct 46699591 CGTGATGGTCTTCCCCGTAAGGGTTTT 46699565
Score = 149 bits (164), Expect = 1e-30
Identities = 168/225 (75%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || ||||| || ||||| ||||| |||| |||||||| | | |||
Sbjct 7045136 ACGCAGGCGCACCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAGAGAGT 7045195
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || ||||| || ||||||| || || || || ||||| || ||||| ||
Sbjct 7045196 GCGGCCATCCTCCAGCTGTTTGCCAGCGAGTATCAGCCGCTGCTGGTCTGGTGGAATGCC 7045255
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||||||||| ||| ||| ||||||||||| || ||| || ||||
Sbjct 7045256 TTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGTTCAACCTCTAG 7045315
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||||||||||| || || | | | |||||||||
Sbjct 7045316 GGTGATGGTCTTGCCCGTCAGGGTCTTCACAGAGATTTGCATTTT 7045360
>seq93
Length=9247444
Score = 154 bits (170), Expect = 4e-32
Identities = 170/226 (75%), Gaps = 4/226 (2%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || || ||||| || ||||| | |||||| || | ||||||
Sbjct 8914039 ACGAAGTCTCAGTACAAGATGAAGGGTGGACTCCTTTTGAATATTGTAGTCAGACAAAGT 8914098
Query 225552 TCTCCCAT----CTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAA 225607
| ||||| |||| || ||||| ||||| ||||| | || || || || || ||||
Sbjct 8914099 ACGCCCATCTTCCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAA 8914158
Query 225608 TACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGT 225667
| |||||||| || |||||||| ||| ||| ||| || ||||| |||| ||| || |
Sbjct 8914159 TTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCT 8914218
Query 225668 CTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
| | |||||| ||||| ||||| | ||||| | ||| | |||||
Sbjct 8914219 CGAGCGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 8914264
>seq89
Length=9688204
Score = 152 bits (168), Expect = 1e-31
Identities = 171/225 (76%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || || ||||| || ||||| | ||||| || | ||||||
Sbjct 7024330 ACGAAGTCTCAGTACAAGATGAAGGGTGGACTC-TTTTGAATGTTGTAGTCAGACAAAGT 7024388
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||||||| || ||||| ||||| ||||| || | || | || || ||||| ||
Sbjct 7024389 ACGCCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTAATCAGGAGGAATTCC 7024448
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||| || ||||| |||| ||| || || |
Sbjct 7024449 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAG 7024508
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||||| ||||| ||||| | ||||| | ||| || ||||| ||
Sbjct 7024509 CGTGATGGTCTTCCCCGTAAGGGTTTTCACGAA-AC-TGCATCTT 7024551
>seq44
Length=18557718
Score = 150 bits (166), Expect = 4e-31
Identities = 159/207 (77%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || || ||||| || |||| | |||||| || | ||||||
Sbjct 841677 ACGAAGTCTCAGTACAAGATGAAGGGTGGACTC-CTTTGAATATTGTAGTCAGACAAAGT 841735
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||||||||| || ||||| ||||| ||||| |||| || || || || ||||| ||
Sbjct 841736 ATGCCCATCTTCAAGTTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCC 841795
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||||| ||||| |||| ||| || || ||
Sbjct 841796 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCGA--GTGTCCGAGGGTTCAACCTCGAA 841853
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|||||| ||||| ||| | | |||||
Sbjct 841854 CGTGATGGTCTTCCCCTTAAGGGTTTT 841880
>seq14
Length=40345996
Score = 149 bits (164), Expect = 1e-30
Identities = 167/222 (75%), Gaps = 1/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || || ||||| || || || | ||||| || | ||||||
Sbjct 27521049 ACGAAGTCTCAGTACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGT 27520990
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| | ||||| ||||| ||||| || | || ||||| || ||||| ||
Sbjct 27520989 ACGCCCATCTTGCACTTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATTCC 27520930
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||| | ||||| |||| ||| || || |
Sbjct 27520929 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTCTAGTGTCCGAGGGTTCAACCTCGAG 27520870
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| ||||| ||||| || | ||| ||||| | |||||
Sbjct 27520869 CGTGATGGTCTTCCCCGT-AAGGGTTTCATGAAAATCTGCAT 27520829
>seq73
Length=12918409
Score = 136 bits (150), Expect = 9e-27
Identities = 158/212 (75%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564
|| ||||| || ||||| ||||| |||| | |||||| | | ||| | ||||| ||
Sbjct 707545 ACCAGGTGCAGGGTGGACTCTTTCTGGATGT-GTAATCAGAGAGAGTGCGGCCATCCTCC 707487
Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624
|||| || |||||||| || || || || ||||| || ||||| |||||||||||||||
Sbjct 707486 CGCTGTTTGCCAGCGAATATCAGCCGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCTTGG 707427
Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684
||||| ||| ||| ||||||||||| || ||| || | || ||||| || |||
Sbjct 707426 ATCTTGGTCTTGACATTCTCGATGGTGTCACTGGGTTCAACCTGTAGGGTGATGGTTTTG 707367
Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||||| || || | || | |||||||||
Sbjct 707366 CCCGTCAGGGTCTTCACAAAGATTTGCATTTT 707335
>seq57
Length=15126812
Score = 131 bits (144), Expect = 4e-25
Identities = 120/152 (79%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| ||||| |||| |||||||| | | ||| | ||||||
Sbjct 1409816 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 1409757
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || ||||| || || || |||||||||||
Sbjct 1409756 TCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 1409697
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653
|||||||| |||||| |||||||||||
Sbjct 1409696 TGGATCTTGGCCTTCACGTTCTCGATGGTGTC 1409665
>seq138
Length=5537732
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || | ||||| || ||||| | |||||| || | |||||
Sbjct 893905 ACGAAGTCTCAGTACAAGATGAACGGTGGACTCCTTTTGAATATTGTAGTCAGAAAAAGT 893846
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||||||| || ||||| |||| ||||| | || || || || || ||||| ||
Sbjct 893845 ACGCCCATCTTCCAGTTGCTTTCCAGAAAAGATCAATCTCTGCTGATCAGGAGGAATTCC 893786
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||| || ||||| ||| || || || |
Sbjct 893785 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCAAGGGCTCAACCTCAAG 893726
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
| | || ||| | ||||| | |||||
Sbjct 893725 CATAATGGTCGTCCCCGTAAGGGTTTT 893699
>seq2
Length=75421681
Score = 125 bits (138), Expect = 2e-23
Identities = 154/208 (74%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || |||||||| || ||||| | ||||| || | |||||
Sbjct 14371028 ACGAAGTCTCAGCACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGG 14371087
Query 225552 TCTCCCATCTT-CTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610
| |||||||| |||| ||||| ||||| ||||| || | || || | || |||||
Sbjct 14371088 ACGCCCATCTTCCTAG-TGCTTACCAGCAAAGATCAGCCTCTGCTGATTAGGGGGAATTT 14371146
Query 225611 CTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
||| ||| || |||||||| ||| ||| ||| | |||||||||| || | || |
Sbjct 14371147 CTTTCTTATCCTGGATCTTGGCCTTTACATTTTCTGTAGTGTCTGAGGGTTTAGCCTCGA 14371206
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|||||| ||||| ||| | | |||||
Sbjct 14371207 GCGTGATGGTCTTCCCCATAAGGGTTTT 14371234
>seq37
Length=22002326
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || | ||||| || ||||| | |||||| || | ||||||
Sbjct 17221340 ACGAAGTCTCAGTACAAGATGAACGGTGGACTCCTTTTGAAAATTGTAGTCAGACAAAGT 17221281
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|||||||| || ||||| ||||| ||||| || | || | || || ||||| ||
Sbjct 17221280 GTGCCCATCTTACAGTTGCTTTCCAGCAAAGATCAGCCTCTGATAATCAGGAGGAATTCC 17221221
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| || || | ||| ||| ||| || || |
Sbjct 17221220 TTCCTTATCCTGGATCTTGGCCTTTACATTTTTTATAGAGTCCCAGGGTTCAACCTCAAG 17221161
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
| |||| ||||| || || | ||||| ||||
Sbjct 17221160 CATGATGGTCTTCCCAGTAAGGGTTTTCGTGAA 17221128
>seq116
Length=7179089
Score = 120 bits (132), Expect = 7e-22
Identities = 159/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || ||||| || || |||| ||||| || | ||| || | ||||||
Sbjct 4848379 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 4848438
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | || ||||| || || || || || |||||
Sbjct 4848439 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 4848498
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||||||| ||| || ||||||||||| || ||||| || | ||||| |||
Sbjct 4848499 TGGATCTTTGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 4848558
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATGGTT 225722
||||| |||| || || | || | ||||| || || ||
Sbjct 4848559 TTGCCGGTCAGGGTCTTCACAAAGATCTGCATCTTCTGTTT 4848599
>seq1
Length=77654946
Score = 118 bits (130), Expect = 3e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564
|| ||||| || |||| ||| | |||| ||||||| | | ||| | ||||| ||
Sbjct 73228530 ACCAGGTGCAGGGTGGGCTCTCTCTGGATGCTGTAATCAGACTGAGTGCAGCCATCCTCC 73228471
Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624
||| || ||||||| || || || || ||||| || ||||| |||||||||||||||
Sbjct 73228470 CGCTATTTGCCAGCGAGTATCAGCCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGG 73228411
Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684
||||| ||| ||| | ||||||||| | ||| || |||| ||||| ||||||
Sbjct 73228410 ATCTTAGCCTTGACATTCTTGATGGTGTCACTAGGTTCAACCTCTAGAGTGATGGTCTTG 73228351
Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCATTTTA 225717
||| ||| || || | || | ||||||||||
Sbjct 73228350 CCCATCAGGGTCTTCACAAAGATTTGCATTTTA 73228318
>seq42
Length=18862759
Score = 102 bits (112), Expect = 2e-16
Identities = 158/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 225520 GATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCG 225579
|| ||||| |||| ||||| || | | ||| | ||||| || ||| | | ||||||
Sbjct 11622015 GACTCTTTCTGGATGTTGTATTCAGAGAGAGTGCGGCCATCCTCCAGCCGTGTGCCAGCG 11622074
Query 225580 AAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACA 225639
|| || || || || ||||| || || || |||||||||||||||||||| ||| |||
Sbjct 11622075 AATATCAGCCGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACA 11622134
Query 225640 GCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTT 225699
| | ||||||| || ||| || |||| ||||| |||| | |||| || ||
Sbjct 11622135 TTTATGTTGGTGTCACTGGGTTCAACTTCTAGTGTGATGGTCTCACTTGTCAGGGTCTTC 11622194
Query 225700 ATGAACACTTGCATTTT-ATGGTTACT-TACCGCCTGTTTAAA 225740
| || | ||||||||| ||| | || ||||||| |||||
Sbjct 11622195 ACAAAGATTTGCATTTTGGTGGCTGCTCGACCGCCTCATTAAA 11622237
>seq45
Length=18186770
Score = 98.7 bits (108), Expect = 2e-15
Identities = 153/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || ||||| || | ||| |||||||| | | ||| |||||
Sbjct 11996464 CAGGACCAGGTGCAGGGTGGACTCCT---GGATGTTGTAATCAGAAAGAGTGTGACCATC 11996520
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|||| ||||| | || || |||| || || || ||||| || || |||||||| |
Sbjct 11996521 TTCTGGCTGCCTGCCCGCAAAGAGGAGACGCTGCTGGTCTGGGATGATGCCTTCCTTATT 11996580
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| |||| | |||||||| | || ||| | || | ||||| ||
Sbjct 11996581 CTGGATCTTGGCCTTCGCGTAACCGATGGTGGCGCTGGGCTCCGCCTCCAGAGTGATGGT 11996640
Query 225681 CTTGCCCGTCAAAGTTTTT-ATGAACACTTGCATTTT 225716
|||||| |||| |||||| | ||| |||||||||||
Sbjct 11996641 CTTGCCGGTCAGCGTTTTTCACGAAGACTTGCATTTT 11996677
>seq5
Length=53451024
Score = 96.9 bits (106), Expect = 8e-15
Identities = 150/213 (70%), Gaps = 1/213 (0%)
Strand=Plus/Plus
Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564
|| ||||| || ||||| ||||| |||||||||||||| | | ||| | ||||| ||
Sbjct 36801422 ACCAGGTGCAGGGTGGAGTCTTTCTGGACATTGTAATCAGAGAGAGTGCGGCCATCCTCC 36801481
Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624
|||| | ||||| | | | | | ||||| || || || |||||||||||||||
Sbjct 36801482 TGCTGTTGGCCAGCAAGTTTCGGCCACTTCTGGTCTGGTGGGATGCCTTCCTTGTCTTGG 36801541
Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC-TT 225683
||||| ||| ||| ||||||||||| || ||| | |||| |||| | | ||
Sbjct 36801542 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGTTCAGCCTCTAGGGTGACGGCCTTT 36801601
Query 225684 GCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||| ||| || || | || |||||||||
Sbjct 36801602 GCCCCTCAGGGTCTTCACAAAGGTTTGCATTTT 36801634
>seq10898
Length=16546
Score = 95.1 bits (104), Expect = 3e-14
Identities = 126/175 (72%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615
||||||||||| || | || || |||||||| || || |||||||| | ||||| |||
Sbjct 5507 TTTACAACGTTGTTGTAACCGCTCATGCCTTCGTAATAATTTTCTTCATAGTTATACCGA 5566
Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675
| ||||| || || || || || ||| | || || |||| || || || || || || |
Sbjct 5567 TAATGATTGGAGGATTTGGCAACTGACTAGTACCACTAATAATCGGAGCCCCAGACATAG 5626
Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730
| || || | | |||||||| || ||||| | ||||| || || || ||||
Sbjct 5627 CCTTCCCTCGAATAAACAATATGAGCTTTTGGCTTCTACCTCCATCATTCCTTCT 5681
>seq87
Length=9819979
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 225609 ACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTC 225668
||||||||||||||||||||| ||| ||| ||||||||||| || ||| || ||
Sbjct 4021979 ACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGTTCAACCTC 4022038
Query 225669 TAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||| ||||||||||||| || || | || | |||||||||
Sbjct 4022039 TAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATTTGCATTTT 4022086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192364686123212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |