Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30] 10,898 sequences; 2,835,250,225 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq57 307 1e-78 seq6 224 1e-53 seq7443 136 5e-27 seq3 131 2e-25 seq83 116 5e-21 seq171 107 3e-18 seq63 102 1e-16 seq81 89.7 7e-13 >seq57 Length=15126812 Score = 307 bits (340), Expect = 1e-78 Identities = 608/893 (68%), Gaps = 14/893 (2%) Strand=Plus/Minus Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894 ||||| |||||||| | || | ||||| || | ||||| | || ||||| || ||| Sbjct 10750320 GACATCACTCCCATCCTCTGGTGCTCACCTACTCTCTTCTCAGAGAAGTTAGTCTTTCCT 10750261 Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAAT 47954 || | ||| ||| | ||||| || |||||||| || || | | |||| || ||||| Sbjct 10750260 TCTAGTGAAATAATCTCCATGAAGTCAAATGGGTTTTCTACTCTGAAAATCTTGTTAAAA 10750201 Query 47955 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTT-TTCATCATTTCACA 48013 || | ||| || || || ||||| || ||||| || | ||| ||||| | || Sbjct 10750200 CCCATTTCCAGCATAAGCCTGTCTGCCACAAATTCAATGT-TCTGCTTCATTAAAGTGCA 10750142 Query 48014 ATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGAC 48073 ||||||||| || | || || || | ||||| || || ||||| | ||| || |||| Sbjct 10750141 ATTCATTCCAATGAACTTCACAGGCAAGGCCTCTGTGAGGAACTCCTCTTCTATTCTGAC 10750082 Query 48074 AGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAA 48133 ||||| || ||||| | || | ||| |||| || | || || || || Sbjct 10750081 AGCATTGACAATTATTTCCTTGACTCACTACTCTAATGGTTTGTATACCAGGTGCTTGAA 10750022 Query 48134 CATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAA 48193 || | || | |||||||| ||| | ||| ||||||| |||||| | || | ||||| Sbjct 10750021 CACCAGGCAGGTAAAATCAC-ATGTAAACCCTCATCTCGACTAATAAGCTCACTGGAAAA 10749963 Query 48194 TGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGA 48253 |||||| || ||||| ||||| |||| |||||||||||||||| || ||||| ||||| Sbjct 10749962 TGTGAGGCCAGGCATCAGTCCCTGTTTCTTGAGCCAAAATATTGATGCAAAAGAACCAGA 10749903 Query 48254 AAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTT 48313 |||| || ||| | || ||||| || || ||||| || | || || || Sbjct 10749902 AAAG---ATTTCTTTCGCAGCAGCAAAAGCTACAACATGTTCTCCATAGGTAGCCTCTTT 10749846 Query 48314 GT---GTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTAT 48370 | ||||| | | | | || ||||||||| | ||||||||| |||| || Sbjct 10749845 ATCCACAATCCAACACAGGGTCACGTCTGCCTTCTTC---ATACAAGGCATCCTTTCAAT 10749789 Query 48371 AGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACT 48430 ||||| ||||| |||| |||| ||| |||||| |||| | || || | ||||| Sbjct 10749788 GGCATTGAAGAGGAAGTCCCTTTCTTTGACATCTTTTGTGTAAATGTCAATAAGGAGACT 10749729 Query 48431 ATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTC 48490 ||||| | || || || || || || || || || || || || ||||| | ||||| Sbjct 10749728 GTACATCCCAGAATGTATGTTATCCATGGCAATTTGGAACCCATAGAAACAGCGGGCTTC 10749669 Query 48491 TGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACT 48550 ||| || || || || | |||||| || ||| || ||||||||||| |||||||| Sbjct 10749668 TGTAATTTGAACTTCTTGGCTAAATCGCTCCACCATGTTTTCATTTACTATACCATCACT 10749609 Query 48551 AGCAGCAAAAAATGCTAATACATGTTTAATAAA--ATATTTTTCGTTGGAAGTCAGTTTA 48608 |||||||| || || | || | ||||| || |||||| | | |||| Sbjct 10749608 GGCAGCAAAGAAAGCCAGAACGAGAGATATAAAGTATCTTTTTCTTCAGGCTTCAGGGCT 10749549 Query 48609 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCT 48668 | ||||| | | || || || | |||||| | ||||||||||| || || ||| Sbjct 10749548 TCCCAGTGCTGAACGTCCTTGGAAAGATCTACCACCTCAGCTGTCCAGAAGGAGGCCCTG 10749489 Query 48669 GCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 ||||| || ||||| | ||| |||||| ||||| || || || |||||||| Sbjct 10749488 GCTTTCTTGTACATCTGCCAGATATCATGCTATTGCATAGGAAAGATAACAAA 10749436 >seq6 Length=52350410 Score = 224 bits (248), Expect = 1e-53 Identities = 495/736 (67%), Gaps = 12/736 (2%) Strand=Plus/Minus Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894 ||||| |||||||| | ||||| || || || | ||||| || ||||| || ||| Sbjct 1187454 GACATCACTCCCATCCTCTGATACTCTCCTACTCTATTCTC--AACTGTTAGTCTTTCCT 1187397 Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAAT 47954 || | | ||||| ||| | || ||||||| | || | | |||| || ||||| Sbjct 1187396 TCTGGTAAAATATTCTCCCTGAAGTCAAATGATATTTCTACTCTGAAAATCTTGTTAAAA 1187337 Query 47955 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAA 48014 | ||| || || || ||||| || ||||| || || ||||| | |||| Sbjct 1187336 TTGAGTTCCAGTATAAGCCTGTCTGCCACAAATTCAATGTACTGCTTCATTAAAGTACAA 1187277 Query 48015 TTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACA 48074 || |||| || || || || || | || || || | | ||| | ||| || ||||| Sbjct 1187276 TTTGTTCCAATGAGCTTCACAGGCAAGGCTTCTGTGAAGATCTCCTATTCTATCCTGACA 1187217 Query 48075 GCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAAC 48134 |||| || ||||| | || | ||| |||| | | ||| || || ||| Sbjct 1187216 GCATTGACAATTATTTCCTTGACTCGCTGCTCTGATGGTTTGTGTACCAAGTGCTTGAAC 1187157 Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194 || | || ||||||||||| || ||||| |||||| |||||| | || || |||||| Sbjct 1187156 ATCAGGCAGGCAAAATCACAGTGTAGACCCTCATCTTGACTAATAAGCTCATTGGAAAAT 1187097 Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAA 48254 ||||| || ||||| ||||| |||| ||||||| ||| ||| || ||||| |||||| Sbjct 1187096 GTGAGGCCAGGCATCAGTCCCTGTTTCCTGAGCCAGAATGTTGGTGCAAAAGAACCAGAA 1187037 Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGCGGTA-AGTCT-CTCTCCGTAACTGGCTTCGT 48312 |||| || ||||| || || |||| | | || || | ||||| | | || || | Sbjct 1187036 AAGATGATTCCTTCCACAGCAGCAA--GAGCTACAGCATGTTCTCCATTGGTCGCCTCTT 1186979 Query 48313 TGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTA 48369 ||| | ||||| || |||| || |||| |||| ||| | |||| ||||| | Sbjct 1186978 TGTCTGCAATCCAACGCAAGGCCCCGTCTGCCTCCTTC---ACAGGAAGCATCGTTTCAA 1186922 Query 48370 TAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGAC 48429 | ||||| | || || | |||| ||| |||||||| |||| || | | |||| Sbjct 1186921 TGGCATTGACAAGGAATTCCCTTTCTTTGGAATCTTTAATAGAAGTGTCAGTAAGGAGAC 1186862 Query 48430 TATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTT 48489 | ||||| || || | || |||||||| || | || || || ||||| | |||| Sbjct 1186861 TGTACATCTCAGAACGTATGTTTTCAATGGCAGTTTGGAACCCAATGAAACAGCGAGCTT 1186802 Query 48490 CTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCAC 48549 |||| || || || || | ||||| || ||||| || ||||| ||| | |||||| Sbjct 1186801 CTGTAATTTGAACTTCTTGGCCAAATCACTCCGCCAAGTTTTCATTCACTGTGTCATCAC 1186742 Query 48550 TAGCAGCAAAAAATGC 48565 | ||||||||||| || Sbjct 1186741 TGGCAGCAAAAAAAGC 1186726 >seq7443 Length=1322 Score = 136 bits (150), Expect = 5e-27 Identities = 338/504 (67%), Gaps = 13/504 (3%) Strand=Plus/Minus Query 47967 ATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATA 48026 || || || ||||| | || ||| || || ||||||| ||| ||||||| || Sbjct 1258 ATAAGCCTGTCTGCTATGATTTCAATGTACTACTTCATCAACATGCAACTCATTCCAATG 1199 Query 48027 AGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATT 48086 || || || || | ||||| || | ||| | ||||| ||| ||||||| | || Sbjct 1198 AGCTTCACAGGCAAGGCCTCTGTGTGGAACCCCTGTTCTATACTGACAGCGTTGGTAGTT 1139 Query 48087 ATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCA 48146 || | || | ||| | |||| | ||| || || || || ||| ||| Sbjct 1138 ATTTCCTTGACTCCATGCTCTCATGGTTTGTGTGCCAAGTGCTTGAATATCTGACAGGCA 1079 Query 48147 AAATCACAAT-GAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGAC-CGG 48204 |||||||| | | | ||| |||||| ||||| | || || ||||||||||| | || Sbjct 1078 AAATCACAGTTGTAAACCCTCATCTTGGCTAATAAGCTCATTGGAAAATGTGAGGCAGGG 1019 Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264 |||| |||| | ||| |||||||| ||||||| || || || | ||||||||| || | Sbjct 1018 GCATCAGTCTCCATTTCTTGAGCCAGAATATTGATGCAAAGGAACTAGAAAAGAAGATTC 959 Query 48265 CTTCTACGGCCGCAAATGCGGTA-AGT-CTCTCTCCGTAACTGGCTTCGTTGT---GTAT 48319 ||| || || | ||| || || ||| | ||| | || | || || |||| | Sbjct 958 ATTCCACAGCAGGAAAAGC--TACAGTACATTCTGCATAGGTAGCCTCTTTGTCCCCATT 901 Query 48320 CCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 48379 ||| | | ||| || ||||||||| ||| |||||||||| | |||| ||| || Sbjct 900 CCAATGCAAGGTCCAGTCTGCCTTCTTC---ACA-TAGGCATTGTTGCAATAGTATTGAA 845 Query 48380 GAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTC 48439 ||| || | |||| ||| ||||||| ||||| || || | ||||| ||||| || Sbjct 844 GAGGAATTCCCTTTCTTTGGAATCTTTAGTATAAGTTTCAATAAGGAGACTGTACATCTC 785 Query 48440 GGAGTGAATATTTTCAATTGCCAT 48463 || || || ||||| || ||||| Sbjct 784 AGAATGTATGTTTTCCATGGCCAT 761 >seq3 Length=68754498 Score = 131 bits (144), Expect = 2e-25 Identities = 123/157 (78%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| |||||||| |||||||| || |||||| |||| | || || || ||||| || | Sbjct 19110768 TCCAGCCGTAGAAGTGCATGCTGGTGAGTTTGCCATAATTGGGCTCAGCGATATGGATGT 19110827 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| ||||| |||||||| |||||||||||||| ||||| ||||| || | || || | Sbjct 19110828 TCAAAGACTGGCTTTGATCAATGAAAGCTCCTCTCTCAGCTGCCATCTTGAGAACAGTTT 19110887 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTT 77005 |||||| |||||||| | ||| || ||| ||| || Sbjct 19110888 TTTGAGAGATTTCCCATACAGTCTTATAAAGTTGCTT 19110924 Score = 123 bits (136), Expect = 3e-23 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| ||||| || || |||||||| || ||||| | || Sbjct 19114008 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTACTGGTGTAAGGTTCAATGGAC 19114067 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || |||| || |||||||| |||||||| ||||| || || | | ||||||| Sbjct 19114068 TCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTCGGCATTGGGGCAATAAGTAAACTA 19114127 Query 77247 TTTCTGAGACCAT 77259 ||||||| ||||| Sbjct 19114128 TTTCTGATACCAT 19114140 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| || |||| || ||||| |||| | ||| Sbjct 19125212 ACTCGTTTCATGAAGAGATCTGGAATCCACAGGGCAAAGAAAAGATCCCGGGCACGCTGT 19125271 Query 78063 TCTTCATTTCCTGTATTCTT-TTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121 ||||| || ||||| ||||| |||||| || |||||||| | || || | ||||| || Sbjct 19125272 TCTTCCTTGCCTGTGTTCTTCTTTAAG-TCAAGAAACTCAAAGATGTCTAAGTGCCAAGG 19125330 Query 78122 TTCTAGATATATTGCCATAACTCCAGGTCG 78151 || || || || || | ||||||| || Sbjct 19125331 CTCCAGGTAAATAGCAAATGCTCCAGGCCG 19125360 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| || ||||| || |||||||| || ||| Sbjct 19133917 GTACCCGCATTGAAGAGAGTAGGAGAGGCATGGGTGAACCACTTCTCAGAAAGAAGGTTG 19133976 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 ||||||||||| || | || ||||| || || || || || | || | ||||| | Sbjct 19133977 TATGTTTCAATTGCAGCATCAATGTCTTCTTTGTGGATCCCCACAGAGACTCTCATCAGC 19134036 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 ||||| || ||||||||| || Sbjct 19134037 ATATGTTGGGGTCTTTCAGCC 19134057 Score = 86.0 bits (94), Expect = 9e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 |||||||| ||||||||||| ||||||| ||||| ||||||||||| |||||||| ||| Sbjct 19124733 TCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACACATCAAAGAC 19124792 Query 77985 CAGTC 77989 ||||| Sbjct 19124793 CAGTC 19124797 >seq83 Length=10591344 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 ||||||| |||||| | || || ||||||||||| || ||||| ||||| ||||| ||| Sbjct 7356160 TCATCTCGACTAATAAGCTCATTGGAAAATGTGAGGCCAGGCATCAGTCCCCGTTTCTTG 7356219 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||||| || ||||| ||||||||||| || ||||| || || ||||| || Sbjct 7356220 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGC 7356278 >seq171 Length=3042471 Score = 107 bits (118), Expect = 3e-18 Identities = 229/337 (68%), Gaps = 9/337 (3%) Strand=Plus/Plus Query 45876 TCCAGTGGATCCAAATCCTTGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCCTT 45935 ||||||||| ||||| ||| | | | | ||||| |||| || ||| ||||| | Sbjct 1173427 TCCAGTGGAACCAAAACCTCCCGAGCCCCGCTCAGTGTCATCCAGCACTTGAACTTCTTC 1173486 Query 45936 CAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTTAT 45995 | || |||||| | || |||| | | || || || || || | ||| ||| |||| Sbjct 1173487 TATTTCTGGATAAAAAATCCGTTCACAAATAAGCTGTGCAATCCAATCGCCCTGTTTTAC 1173546 Query 45996 TTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCTTC 46055 |||||| | ||||| ||| ||| | || | || |||| | |||||||||||||| Sbjct 1173547 TTCAAACTTCTCTTTCCCAAAATTAAGCAATACAACACCAACATTTCCTCTATAATCTTC 1173606 Query 46056 ATCTATTACTCCCCCTCCCACATCGAT---ACCTTTTAGAGACAGTCCAGATCTAGGAGC 46112 |||||| || || |||| ||| |||| ||||| || || ||||| | ||| | Sbjct 1173607 ATCTATAACACCAGCTCCTACACCGATGAAGTGTTTTACAGCCAAGCCAGAGCGTGGAAC 1173666 Query 46113 TATTCTTCCATAACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATCTCCT 46172 || ||||||| | || || | || || ||| ||||||| | |||| || Sbjct 1173667 TACTCTTCCA-AGCATCCAGGAGGAACAGCTCTCTGAAAGTCTGTTTCA--CAAT-AGCT 1173722 Query 46173 TTCTCC--AGGAGGGATAGTATAGTCGTACGCACTGT 46207 |||||| ||| || | ||||||||| || ||||||| Sbjct 1173723 TTCTCCATAGGTGGCACAGTATAGTCATAGGCACTGT 1173759 >seq63 Length=13740492 Score = 102 bits (112), Expect = 1e-16 Identities = 240/357 (67%), Gaps = 9/357 (3%) Strand=Plus/Minus Query 45877 CCAGTGGATCCAAATCCTTGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCCTTC 45936 |||||||| ||||| ||| | | | ||| || |||| || || ||||| | Sbjct 12332061 CCAGTGGAACCAAACCCTCCCGAACCCCGTTCTGTGTCATCCAGCACCTGAACTTCTTCT 12332002 Query 45937 AGATCAGGATAATATATA--CGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTTA 45994 | || |||||| | | | |||| | | || || || || || | ||| ||| |||| Sbjct 12332001 ATGTCTGGATAAAAAAAATCCGTTCACAAATAAGCTGTGCAATCCGATCGCCCTGTTTTA 12331942 Query 45995 TTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCTT 46054 |||||| | ||||| ||| ||| | || | | |||| | ||||||||||||| Sbjct 12331941 CTTCAAACTTCTCTTTCCCAAAATTAAACAATACAAAACCAACATTTCCTCTATAATCTT 12331882 Query 46055 CATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGAG 46111 ||||||| || || |||| ||||| || ||||| || || ||||| | |||| Sbjct 12331881 CATCTATAACACCAGCTCCTACATCAATGAAGTGTTTTACAGCCAAGCCAGAGCGTGGAG 12331822 Query 46112 CTATTCTTCCATAACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATCTCC 46171 ||| ||||||||| || || | || ||| |||| | ||||| | |||| || Sbjct 12331821 CTACTCTTCCATAGCATCCAGGAGGAACAGCTATCTGAATGCCGGTTTTCA-CAAT-ACC 12331764 Query 46172 TTTCTCC--AGGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCCTGCTGC 46226 ||||||| || || | |||||||| || |||||||| || || || || || || Sbjct 12331763 TTTCTCCTTGGGTGGCACCGTATAGTCATAGGCACTGTACAAGTCGTAGCCGGCGGC 12331707 >seq81 Length=11848649 Score = 89.7 bits (98), Expect = 7e-13 Identities = 174/253 (69%), Gaps = 7/253 (3%) Strand=Plus/Minus Query 45876 TCCAGTGGATCCAAATCCTTGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCCTT 45935 ||||||||| ||||| ||| | | | ||||| |||| || ||| ||||| || Sbjct 872489 TCCAGTGGAACCAAAACCTCCGGAACCACGCTCAGTGTCATCAAGCACTTGAACTTC-TT 872431 Query 45936 CAGAT-CAGGAT--AATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATT 45992 | | | | |||| || | || |||| | | || || || || || | ||| ||| || Sbjct 872430 CTGTTTCTGGATTTAAAAAATCCGTTCACAAATAAGCTGTGCAATCCGATCGCCCTGTTT 872371 Query 45993 TATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATC 46052 || |||| | | ||||| ||| ||| | ||| | | |||| | ||||||||||| Sbjct 872370 TACTTCAGACTTCTCTTTCCCAAAATTAAACAGTACACCACCAACATTTCCTCTATAATC 872311 Query 46053 TTCATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGG 46109 ||||||||| || ||| |||| ||||| || ||||| || || ||||| | || Sbjct 872310 TTCATCTATAACACCCGCTCCTACATCAATGAAGTGTTTTACAGCCAAGCCAGAGCGTGG 872251 Query 46110 AGCTATTCTTCCA 46122 ||||| ||||||| Sbjct 872250 AGCTACTCTTCCA 872238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694574168742720