Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11- 20] 14,543 sequences; 2,510,587,379 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq161 293 3e-74 seq67 194 2e-44 seq58 176 6e-39 seq13 156 6e-33 seq7 123 4e-23 seq4 120 4e-22 seq87 118 2e-21 seq19 102 1e-16 seq12166 89.7 7e-13 >seq161 Length=830332 Score = 293 bits (324), Expect = 3e-74 Identities = 627/937 (67%), Gaps = 36/937 (4%) Strand=Plus/Plus Query 49607 TGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTC 49663 |||| ||||||||| | |||| | | |||| ||||||| | || ||||| |||| Sbjct 529761 TGTTCATTTAAAAGTTAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTC 529820 Query 49664 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATA 49723 |||| | || || | || || | || || || || ||||| || ||||| | ||| | Sbjct 529821 CCATCCTCTGATACTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCTAGTGAAA 529880 Query 49724 TATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAG 49783 |||| ||||| || ||||| ||||| || || ||| || ||||| |||| || Sbjct 529881 TATTCTCCATAAAGTCAAATGGATTTTCTACTTTGAAAACCTTGTTAAAGCCCAGCTCCA 529940 Query 49784 AAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA 49843 || | ||||| || ||||| || || || ||||||| |||||||| || | Sbjct 529941 GCATAAGCCTATCTGCCACAAAGTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCAA 530000 Query 49844 TAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA 49903 | || || | || | || | || || || | ||||| || | || |||| | | Sbjct 530001 TTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACGCCTGTTCTATTGTGACAGCAT---TGA 530057 Query 49904 TAATAGAT-CTAACGGTTTCTTCACTC--GGTGGATGCAATAAATGTTTAAACATCAAAC 49960 |||| | | || | ||| | || ||| |||| | ||||| ||||||| | Sbjct 530058 TAATTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGCAGCAGGTGTTTGAACATCAGGC 530117 Query 49961 ATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTC 50020 | || || || ||||| | ||||| ||| | ||||| ||||| |||||||| ||||| | Sbjct 530118 AGGCAAAGTCACAGTGTAAGCCCTCATCTTTGCTAATAAGTTCATTGGAAAATGTGAGGC 530177 Query 50021 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGA 50080 | ||||| || || || || || ||| ||||||||||| Sbjct 530178 CAGGCATCAGTCCTCGTTTCTTGAGC-----------------------AGAAAAGAAGA 530214 Query 50081 TTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGTA 50137 |||| || || || |||||||| |||| | |||||||| | || |||| | Sbjct 530215 TTCCCTCCACAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAA 530274 Query 50138 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAA 50197 || | ||||||||||| ||||| || ||||||||||| ||| | |||||||| | Sbjct 530275 TCAAACGCAAGGCCCAATCGGCTTTCTTCTTCACACAAGGCATTGTTACAATGGCATTGA 530334 Query 50198 AGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTT 50257 ||||| | | |||| || ||||||| ||||| || || | ||||||||||||| Sbjct 530335 AGAGAAATTCCCTTTCTTTGGAGTCTTTAATGTAAGTGTCAATAAGGAGACTATACATTT 530394 Query 50258 CCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 50317 | ||||| |||||||| ||||| || || || || ||||||| | || || ||||| | Sbjct 530395 CAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATTT 530454 Query 50318 GCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 50377 | |||||| | |||||| || | ||||| ||||| ||||| || ||||| || ||| Sbjct 530455 GAACTTCTTGGCTAAATCGCTCCACCAAATTCTCATTTACTATGCCATCACTTGCCGCAG 530514 Query 50378 AAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCAT 50437 | || |||| | || |||||||| | ||| | || | || | ||| | | Sbjct 530515 AGAAAGCCAGAAAGTGGGATATAAAATATCATTCCTCAGGCTTCAGGGCTTCCCAGTGCT 530574 Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497 || || | || | | | || || || |||||||||| || ||||| || || ||| Sbjct 530575 GAATGTCCCTGGA-AGAGCCACCTCCTCGGCTGTCCAAAAGGAAGCCTCAGCTTTATTAC 530633 Query 50498 ACATATTCCAGATGTCATGATATTGGATTGGGAAAAT 50534 |||| | |||||| |||| |||| || || || || Sbjct 530634 ACATCTGCCAGATACCATGGTATTCCATAGGAAAGAT 530670 >seq67 Length=10555288 Score = 194 bits (214), Expect = 2e-44 Identities = 564/864 (65%), Gaps = 16/864 (2%) Strand=Plus/Minus Query 49690 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 49749 || || || ||||| ||||| || || || || || |||||||| |||||||| ||||| Sbjct 3668870 TTCTCAAAGAAATTTGTTTTCCCATCTAAAGAAATGTTTTCCATAAAATCAAAGGGATTT 3668811 Query 49750 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCT 49809 | | | ||| ||| ||||| | ||| || ||||| || || |||||||| Sbjct 3668810 TCTGCCTGAAAAACCTTTGAGAATCCAAGTTCCACAAGTAATCTTTCAGCTACAAATTCA 3668751 Query 49810 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA 49869 ||||| |||||| |||| ||||| | || || |||||| | | | || Sbjct 3668750 ATATACTGGCTCATCAAAACACAGTTCATCCTAATGAGGCCAACTGGCAAGTCTTCTGTT 3668691 Query 49870 AGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCT-----AACGGTTTCTT 49924 | ||| || || ||||| || |||| | | ||| ||||| | | |||||| Sbjct 3668690 AAAAACTCCTGCTCAATTTTGACAGCAT---TAACAAT-GATCTCCCTCACCCTTTTCTT 3668635 Query 49925 CACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 49984 | | || | ||| | | |||||| | || || || || || | || | | Sbjct 3668634 CTGAAGTCTTATTTACTAAGTACTGAAACATTAGGCAAGCAAAGTCATAGAGAAGTTCTT 3668575 Query 49985 CGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAA 50044 | ||||| | || || || ||| |||| |||||||| || || | || | ||| || | Sbjct 3668574 CATCTCTGTTGATCAGCTCATTGAAAAATGTGAGTCCAGGGATGGGACCTCTCTTCTTTA 3668515 Query 50045 GCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAA 50104 ||| || || | ||||| || || || ||||| |||||||| || || | ||| | Sbjct 3668514 ACCAGAAAATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCACTGATGGCCA 3668455 Query 50105 CAAGTCTCTCTCCATAACTGGCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 50161 | | ||| || ||| || | | || || |||||| | ||||| || | | Sbjct 3668454 CCACTCTTTCCCCAAAAGTAGACTTTCTATCTGCTATCCATCACAGGGCCCAGTCTGTTT 3668395 Query 50162 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTAT 50221 | || || || | ||||| |||| || |||||||| | | | || || || || Sbjct 3668394 TTTTCTTAACGTATGGCATTGTTTTAATTGCATTAAATAAAAATTTCCCTTTCTTGGGAT 3668335 Query 50222 CTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 50281 || | | |||||| || | | ||| || || | || |||| || | ||| | Sbjct 3668334 CTCTGATTCTAGTATCTATTAGCAAACTGTATATCTTTGAGTGAACATTCTTTATGAGAA 3668275 Query 50282 TCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAG 50341 | ||||| || |||||||| | |||||| | || ||||| || || ||| | || Sbjct 3668274 TTTGAAAACCATAGAAACAGCAAGCCTCTGAAACTTGCACCTCCTGACTAAAGCTCTCCA 3668215 Query 50342 CTAAATTTTCATTCACTATTCCGTCACTGGCTGC---AAAAAACGCCAATACATGTTTTA 50398 | ||||||||||| | |||| ||||||| ||| |||||| || || | ||| | Sbjct 3668214 CCAAATTTTCATTTCCATTTCCATCACTGGTTGCAAAAAAAAAAGCTAAGATATGAGAGA 3668155 Query 50399 TAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATA-TCT 50457 ||||| || || | | | | || || ||| | | | || ||| || |||| | || Sbjct 3668154 GAAAATAATTCTCATCTGATTTAAGCTTGTTCTAGTGAAGGAGATCCTTTGATAAAGTCA 3668095 Query 50458 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 50517 || ||||| ||||||| || ||||||| ||||| || |||||| ||||| || || | Sbjct 3668094 ACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTCATACATTTTCCAAATATCGGGG 3668035 Query 50518 TATTGGATTGGGAAAATAACAAAT 50541 || || ||||| || || |||||| Sbjct 3668034 TACTGAATTGGAAATATGACAAAT 3668011 >seq58 Length=13050397 Score = 176 bits (194), Expect = 6e-39 Identities = 619/949 (65%), Gaps = 26/949 (3%) Strand=Plus/Plus Query 49604 TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAA 49660 || |||| |||| || ||| |||| | | |||| ||| || | || ||||| Sbjct 9035705 TTCTGTTCATTTAGAAATCAGCATCCAAGGTAAAAGAATTCCCTGTTGGATTTGACATCT 9035764 Query 49661 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATG 49720 ||||||| | || || ||||| || || || || || ||| | || |||| || Sbjct 9035765 CTCCCATCCTCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCTG-TG 9035823 Query 49721 ATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA-T 49779 | ||||| ||||| || ||| | ||||| || | ||| || |||| |||| | Sbjct 9035824 AAATATTCTCCATAAAGTCAGATGGATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCT 9035883 Query 49780 TCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 49839 ||| | | | || || || || ||||| ||||| ||||||| || ||||| Sbjct 9035884 TCATCA-TAAGCCTGTCTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTCATC 9035942 Query 49840 CCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCT 49899 || | | || || || | ||| | | || || || ||||| | | || |||| | Sbjct 9035943 CCAGTGAACTTCACAGGCAAGGCCTCCATGAGGAACTCCTGTTCTAAGCTGACAGCAT-T 9036001 Query 49900 GTTATAATAGATCTA--ACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATC 49956 | || |||| ||| || | | || || | | | | || | | ||||| |||||| Sbjct 9036002 GATA-AATATTTCTTTTACTCTCTGCTCCAATGGTTTG-TGTAGCAGGTGTTTGAACATC 9036059 Query 49957 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTG 50016 | || || | || || | | |||||| ||||| ||||| ||||| |||||| | Sbjct 9036060 AGGCAGGCAGAGTCACAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAAC--TT 9036117 Query 50017 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAG 50076 || || ||||| | || | || || | | | ||||| || |||| || || | ||| Sbjct 9036118 AGGCCAGGCATCAATCCCCATTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAG 9036177 Query 50077 AAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCA 50133 ||| ||||||| || ||||||||||| |||| | |||| || | || |||| Sbjct 9036178 AAGTTTCCTTCCACAGCGGCAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCC 9036237 Query 50134 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 50193 ||||| | || ||| | ||||| |||||| |||| || ||||| |||||| Sbjct 9036238 CCAATCCAATGCAAGACCTAATTTACTTTCTTCTTTACATAAGGTATTGTTTCAATGGCA 9036297 Query 50194 TTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 50253 || |||||| | | |||| || |||||||| || || || | ||||||||| Sbjct 9036298 TTGAAGAGAAATTCCCTTTCTTTGAAATCTTTAA-----GTGTCAATAAGGAGACTATAC 9036352 Query 50254 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 50313 ||||| |||| | |||||| ||||| || || || | |||||||| | | || ||| Sbjct 9036353 ATTTCACAATGTA-GTTTTCCATGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTA 9036411 Query 50314 ATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373 || || ||||| | |||| || | ||||||||||| | ||| || ||||| ||| Sbjct 9036412 ATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATTTATTATGCCATCACTTGCT 9036471 Query 50374 GCAAA-AAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCA 50432 ||||| ||| | | ||| ||||||| | | | | | | | || |||| Sbjct 9036472 GCAAAGAAATTCATAATTATGAGACATAAAATATCATACCTCAGATTTCAG-GGCTTCCT 9036530 Query 50433 ATCATTG-ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491 | || | || || || || ||| |||| | || ||||| |||| || | || |||| Sbjct 9036531 AGTATAGAATGTCCTTGGAAATAGCTACCACCTCTTCTGTCAAAAAGGAACCTTCAGCCT 9036590 Query 50492 TTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 | ||| | || | ||| || ||||| ||| ||| || || | ||||| Sbjct 9036591 TCTTAGAAATCTGCCAAATATCATGGTATCTGATAGGAAAGAAGACAAA 9036639 >seq13 Length=48154242 Score = 156 bits (172), Expect = 6e-33 Identities = 354/521 (68%), Gaps = 31/521 (6%) Strand=Plus/Minus Query 49983 CTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 50042 ||| ||||| ||||| ||||| ||||||| ||||| || ||||| || | | || || Sbjct 23470804 CTCATCTCTGCTAATAAGTTCACTGGAAAATGTGAGACCAGGCATCAGCCATCATTTCTT 23470745 Query 50043 AAGCCAAAATATG--GACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAG 50100 |||||| ||||| || ||||| || ||||||| ||||||| |||| || |||||| Sbjct 23470744 AAGCCAGAATATACTGATGCAAAAGAACCAGAAAGGAAGATTTCTTCCACATTAGCAAAG 23470685 Query 50101 GCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCC 50160 || ||| |||| || || | | | | ||||| || || |||| | Sbjct 23470684 GCTACATCATGCTCTTCACAAATAGACTTTT----TATCCTGATT----CCAAATCTGTT 23470633 Query 50161 TTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTA 50220 ||||| || |||||||||||| |||| || |||| |||| | | | |||||| || | Sbjct 23470632 TTCTTCTTCACACAAGGCATCATTTCAGTGCCATTGAAGATAAATTCTTTTTCTTTGGAA 23470573 Query 50221 TCTTTAACATAAGTATCGATCAAAAG---ACTATACATTTCCGAATGAATGTTTTCAATG 50277 | ||| ||| | ||| | ||| ||| |||||| | ||||| || ||| | ||| Sbjct 23470572 TTTTT------AGTGT-GATAATAAGGAAACTGTACATTACAGAATGTATTTTTCCTATG 23470520 Query 50278 GCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCG- 50336 || || || ||||| |||||||| || || ||||| || | |||| | |||| | Sbjct 23470519 GCAATTTGGAATCCATAGAAACAGTGGGCTTCTGTAATTTGAATTTCTTGGCTAAATTGC 23470460 Query 50337 TTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTT 50396 |||| | || |||||| | ||| | |||| |||| |||| |||| |||||| Sbjct 23470459 TTCA-CCAATTTTTCACGTATTATGCTATCAC---CTGCTAAAA--GCCAGAACATGTGC 23470406 Query 50397 TATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTT--TAGATATA 50454 |||||||| | | || | | | || |||| | |||| || || | | | | Sbjct 23470405 TATAAAATCTCTCTCCTCAAGCTTCAG-GGCTTCCCAGGGTTGA-ATGTTCCTGAAGAGA 23470348 Query 50455 TCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 50495 ||||| || | ||||||||||| || ||||| || ||||| Sbjct 23470347 TCTACCTCGTTAACTGTCCAAAAGGAAGCCTCAGCTTTTTT 23470307 >seq7 Length=60492774 Score = 123 bits (136), Expect = 4e-23 Identities = 103/126 (82%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| ||||| ||||| |||||||| ||||| || ||||| || || || || | Sbjct 54099246 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 54099305 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| || ||||| || ||||||||||||||||| || || || ||||||| Sbjct 54099306 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 54099365 Query 50102 CAACAA 50107 | |||| Sbjct 54099366 CTACAA 54099371 Score = 93.3 bits (102), Expect = 6e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 50221 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 50280 ||||||| ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 54101125 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 54101184 Query 50281 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || || || || |||||||| | || || ||||| || |||||| | |||||| || Sbjct 54101185 ATTTGGAAGCCATAGAAACAGCGTGCTTCTGTAATTTGAACTTCTTGGCTAAATCGCTC 54101243 Score = 89.7 bits (98), Expect = 7e-13 Identities = 119/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 49591 CAAATATTGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCT 49647 |||||| ||||| || |||| ||||||||||| |||| | | |||| ||||||| Sbjct 54097663 CAAATAAAGGCATATCTTCTGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCT 54097722 Query 49648 TCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 49704 | || ||||| |||||||| | || || || || || | || || || || ||| Sbjct 54097723 GTTGGATTCGACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTA 54097782 Query 49705 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 49748 || || ||||| | ||| ||||| ||||| || ||||| ||||| Sbjct 54097783 GTCTTCCCTTCTAGTGAAATATTCTCCATAAAGTCAAATGGATT 54097826 >seq4 Length=67649338 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| || ||||| |||||||| || |||||| ||| | || || || ||||| || | Sbjct 16420953 TCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGTATGT 16420894 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| ||| || |||||||||||||| || || || ||||| |||||||| | | || | Sbjct 16420893 TCAAAGACTGGCTTTGATCGATGAAAGCACCTCTCTCTGCTGCCATTTTGAGAACAGTTT 16420834 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | |||||||| | ||| ||||||| | |||||| || || |||| Sbjct 16420833 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTAAGGTCATCAGGAA 16420783 Score = 116 bits (128), Expect = 5e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 || |||||||| |||||||| |||||||||||||| | || ||||| |||| || ||| Sbjct 16406665 ACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCGCTGC 16406606 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 ||||| |||||||| ||||| || | ||| |||||| | | || || ||||||| ||| Sbjct 16406605 TCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGT 16406546 Query 80059 TCCAAGTATATGGC 80072 |||| ||| || || Sbjct 16406545 TCCAGGTAAATAGC 16406532 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| | Sbjct 16418169 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATG 16418110 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || |||||||| |||| || ||||||||||| || || ||||| || || | | |||| Sbjct 16418109 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 16418050 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 16418049 CTGTTTCTTACACCATA 16418033 >seq87 Length=7156779 Score = 118 bits (130), Expect = 2e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||||| ||||| || || | ||||||||||||| ||||| |||||||| |||| Sbjct 718051 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTTAGAATGCATGTTTTCTGTGGC 718110 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 | || || || |||||||| | | || ||||| || |||||| | ||||| ||| Sbjct 718111 AACTTGGAAGCCATAGAAACAGCACACTTCTGTAATTTGAACTTCTTGGCTAAATCATTC 718170 Query 50340 AGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 50399 | ||||||||||| ||| || ||||| |||||||| || |||| ||| | ||| Sbjct 718171 CACCAAATTTTCATTTGTTATGCCATCACTTGCTGCAAAGAAAGCCAGAACAAGCAATAT 718230 Query 50400 AAAAT 50404 ||||| Sbjct 718231 AAAAT 718235 >seq19 Length=38427206 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 49984 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 50043 || ||||| || || ||||| |||||||| ||||| || ||||| || || | ||| || Sbjct 3916227 TCATCTCTGCTGATCAGTTCATTGGAAAATGTGAGCCCAGGCATGAGACCTCTCTTCTTT 3916286 Query 50044 AGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCA 50103 | ||| ||||| | ||||| || || || ||||| |||||||| || || ||||||||| Sbjct 3916287 AACCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGGCA 3916346 Query 50104 ACAAGTCTCTCTCC 50117 || | ||| || || Sbjct 3916347 ACCACTCTTTCCCC 3916360 >seq12166 Length=2209 Score = 89.7 bits (98), Expect = 7e-13 Identities = 119/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 49591 CAAATATTGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCT 49647 |||||| ||||| || |||| ||||||||||| |||| | | |||| ||||||| Sbjct 2030 CAAATAAAGGCATATCTTCTGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCT 2089 Query 49648 TCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 49704 | || ||||| |||||||| | || || || || || | || || || || ||| Sbjct 2090 GTTGGATTCGACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTA 2149 Query 49705 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 49748 || || ||||| | ||| ||||| ||||| || ||||| ||||| Sbjct 2150 GTCTTCCCTTCTAGTGAAATATTCTCCATAAAGTCAAATGGATT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718138227710520