Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11- 20] 14,543 sequences; 2,510,587,379 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq161 280 2e-70 seq58 179 5e-40 seq13 147 3e-30 seq7 120 4e-22 seq4 120 4e-22 seq87 109 7e-19 seq12166 95.1 2e-14 >seq161 Length=830332 Score = 280 bits (310), Expect = 2e-70 Identities = 623/937 (66%), Gaps = 36/937 (4%) Strand=Plus/Plus Query 41712 TGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTC 41768 |||| ||||||||| | |||| || | |||| ||| ||| | || ||||| |||| Sbjct 529761 TGTTCATTTAAAAGTTAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTC 529820 Query 41769 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATA 41828 |||| | || || | || || | || || || || |||||||| ||||| | ||| | Sbjct 529821 CCATCCTCTGATACTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCTAGTGAAA 529880 Query 41829 TATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAG 41888 |||| ||||| || ||||| ||||| || || ||| || ||||| |||| || Sbjct 529881 TATTCTCCATAAAGTCAAATGGATTTTCTACTTTGAAAACCTTGTTAAAGCCCAGCTCCA 529940 Query 41889 AAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA 41948 || | |||||||| | || || || || ||||||| |||||||| || | Sbjct 529941 GCATAAGCCTATCTGCCACAAAGTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCAA 530000 Query 41949 TAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA 42008 | || || | || | || | || || || | ||||| || | ||| || | | | Sbjct 530001 TTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACGCCTGTTCTATTGTGACAGCAT---TGA 530057 Query 42009 TAATAGATC---TTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAAC 42065 |||| | | ||||| | | || ||| | || | ||||| ||||||| | Sbjct 530058 TAATTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGCAGCAGGTGTTTGAACATCAGGC 530117 Query 42066 ATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTC 42125 | || || || ||||| | ||||||||| | ||||| | ||| |||||||| ||||| | Sbjct 530118 AGGCAAAGTCACAGTGTAAGCCCTCATCTTTGCTAATAAGTTCATTGGAAAATGTGAGGC 530177 Query 42126 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGA 42185 | ||||| || || || || || ||| ||||||||||| Sbjct 530178 CAGGCATCAGTCCTCGTTTCTTGAGC-----------------------AGAAAAGAAGA 530214 Query 42186 TTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTA 42242 |||| || || || |||||||| | || | |||||||| | | | |||| | Sbjct 530215 TTCCCTCCACAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAA 530274 Query 42243 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAA 42302 || | ||||||||||| ||||| || ||||||||||| ||| | |||||||| | Sbjct 530275 TCAAACGCAAGGCCCAATCGGCTTTCTTCTTCACACAAGGCATTGTTACAATGGCATTGA 530334 Query 42303 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTT 42362 ||||| | | |||| || ||||||| || || || || | ||||||||||||| Sbjct 530335 AGAGAAATTCCCTTTCTTTGGAGTCTTTAATGTAAGTGTCAATAAGGAGACTATACATTT 530394 Query 42363 CTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCT 42422 | ||||| |||||||| ||||| || || || || ||||||| | ||| || |||| | Sbjct 530395 CAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATTT 530454 Query 42423 GTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAA 42482 | |||||| | |||||| || | ||||| || || ||||| || ||||| || ||| Sbjct 530455 GAACTTCTTGGCTAAATCGCTCCACCAAATTCTCATTTACTATGCCATCACTTGCCGCAG 530514 Query 42483 AAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCAT 42542 | || |||| | || |||||||||| ||| || || | | | ||| | | Sbjct 530515 AGAAAGCCAGAAAGTGGGATATAAAATATCATTCCTCAGGCTTCAGGGCTTCCCAGTGCT 530574 Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTAT 42602 || || | || | | | || || || | |||||||| || || || || || ||| Sbjct 530575 GAATGTCCCTGGA-AGAGCCACCTCCTCGGCTGTCCAAAAGGAAGCCTCAGCTTTATTAC 530633 Query 42603 ACATATTCCAGATATCATGATATTGAATTGGGAAAAT 42639 |||| | ||||||| |||| |||| || || || || Sbjct 530634 ACATCTGCCAGATACCATGGTATTCCATAGGAAAGAT 530670 >seq58 Length=13050397 Score = 179 bits (198), Expect = 5e-40 Identities = 608/929 (65%), Gaps = 26/929 (3%) Strand=Plus/Plus Query 41709 TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAA 41765 || |||| |||| || ||| |||| || | |||| ||| || | || ||||| Sbjct 9035705 TTCTGTTCATTTAGAAATCAGCATCCAAGGTAAAAGAATTCCCTGTTGGATTTGACATCT 9035764 Query 41766 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATG 41825 ||||||| | || || ||||| || || || || || ||| |||| |||| || Sbjct 9035765 CTCCCATCCTCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCTG-TG 9035823 Query 41826 ATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA-T 41884 | ||||| ||||| || ||| | ||||| || | ||| || |||| |||| | Sbjct 9035824 AAATATTCTCCATAAAGTCAGATGGATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCT 9035883 Query 41885 TCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATT 41944 ||| | | | || ||||| | |||||| ||||| ||||||| || ||||| Sbjct 9035884 TCATCA-TAAGCCTGTCTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTCATC 9035942 Query 41945 CCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCT 42004 || | | || || || | ||| | | || || || ||||| | ||| || | | Sbjct 9035943 CCAGTGAACTTCACAGGCAAGGCCTCCATGAGGAACTCCTGTTCTAAGCTGACAGCAT-T 9036001 Query 42005 GTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATC 42061 | || |||| |||| ||| | | || || | | | | | | | ||||| |||||| Sbjct 9036002 GATA-AATATTTCTTTTACTCTCTGCTCCAATGGTTTG-TGTAGCAGGTGTTTGAACATC 9036059 Query 42062 AAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTG 42121 | || || | || || | | |||||||||||| ||||| | ||| |||||| | Sbjct 9036060 AGGCAGGCAGAGTCACAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAAC--TT 9036117 Query 42122 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAG 42181 || || ||||| | || | || || | | | ||||| || |||| || || | ||| Sbjct 9036118 AGGCCAGGCATCAATCCCCATTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAG 9036177 Query 42182 AAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCA 42238 ||| ||||||| || || |||||||| | || | |||| || | | | |||| Sbjct 9036178 AAGTTTCCTTCCACAGCGGCAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCC 9036237 Query 42239 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 42298 ||||| | || ||| | ||||| |||||| |||| || ||||| |||||| Sbjct 9036238 CCAATCCAATGCAAGACCTAATTTACTTTCTTCTTTACATAAGGTATTGTTTCAATGGCA 9036297 Query 42299 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATAC 42358 || |||||| | | |||| || |||||||| || || || | ||||||||| Sbjct 9036298 TTGAAGAGAAATTCCCTTTCTTTGAAATCTTTAA-----GTGTCAATAAGGAGACTATAC 9036352 Query 42359 ATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTA 42418 ||||| |||| | |||||| ||||| || || || | |||||||| | || ||| Sbjct 9036353 ATTTCACAATGTA-GTTTTCCATGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTA 9036411 Query 42419 ACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCT 42478 | || ||||| | |||| || | |||||||| || | ||| || ||||| ||| Sbjct 9036412 ATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATTTATTATGCCATCACTTGCT 9036471 Query 42479 GCAAA-AAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCA 42537 ||||| ||| | | ||| ||||||||| | | || | | || | |||| Sbjct 9036472 GCAAAGAAATTCATAATTATGAGACATAAAATATCATACCTCAGAT-TTCAGGGCTTCCT 9036530 Query 42538 ATCATTG-ATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596 | || | || || || || ||| |||| | ||| | ||| |||| || |||| |||| Sbjct 9036531 AGTATAGAATGTCCTTGGAAATAGCTACCACCTCTTCTGTCAAAAAGGAACCTTCAGCCT 9036590 Query 42597 TTTTATACATATTCCAGATATCATGATAT 42625 | ||| | || | ||| |||||||| ||| Sbjct 9036591 TCTTAGAAATCTGCCAAATATCATGGTAT 9036619 >seq13 Length=48154242 Score = 147 bits (162), Expect = 3e-30 Identities = 295/428 (69%), Gaps = 27/428 (6%) Strand=Plus/Minus Query 42088 CTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 42147 ||||||||| ||||| | ||| ||||||| ||||| || ||||| || | | || || Sbjct 23470804 CTCATCTCTGCTAATAAGTTCACTGGAAAATGTGAGACCAGGCATCAGCCATCATTTCTT 23470745 Query 42148 AAGCCAAAATATA--GACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAG 42205 |||||| |||||| || ||||| || ||||||| ||||||| |||| || |||||| Sbjct 23470744 AAGCCAGAATATACTGATGCAAAAGAACCAGAAAGGAAGATTTCTTCCACATTAGCAAAG 23470685 Query 42206 GCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCC 42265 || | | |||| || || | ||| | ||||| || || |||| | Sbjct 23470684 GCTACATCATGCTCTTCACAAATAG-ACTTTT---TATCCTGATT----CCAAATCTGTT 23470633 Query 42266 TTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTA 42325 ||||| || |||||||||||| |||| || |||| |||| | | | |||||| || | Sbjct 23470632 TTCTTCTTCACACAAGGCATCATTTCAGTGCCATTGAAGATAAATTCTTTTTCTTTGGAA 23470573 Query 42326 TCTTTAACATATGTATCGATCAAAAG---ACTATACATTTCTGAATGAATGTTTTCAATG 42382 | |||| ||| ||| | ||| ||| |||||| | ||||| || ||| | ||| Sbjct 23470572 TTTTTA----GTGT---GATAATAAGGAAACTGTACATTACAGAATGTATTTTTCCTATG 23470520 Query 42383 GCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCG- 42441 || || || ||||| |||||||| ||| || |||| || | |||| | |||| | Sbjct 23470519 GCAATTTGGAATCCATAGAAACAGTGGGCTTCTGTAATTTGAATTTCTTGGCTAAATTGC 23470460 Query 42442 TTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTT 42501 |||| | || ||||| | ||| | |||| |||| |||| |||| |||||| Sbjct 23470459 TTCA-CCAATTTTTCACGTATTATGCTATCAC---CTGCTAAAA--GCCAGAACATGTGC 23470406 Query 42502 TATAAAAT 42509 |||||||| Sbjct 23470405 TATAAAAT 23470398 >seq7 Length=60492774 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| ||||| | ||| |||||||| ||||| || ||||| || || || || | Sbjct 54099246 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 54099305 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||| || ||||| || ||||||||||||||||| || || || ||||||| Sbjct 54099306 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 54099365 Query 42207 C 42207 | Sbjct 54099366 C 54099366 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 41696 CAAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCT 41752 |||||| ||||| || |||| ||||||||||| |||| || | |||| ||| ||| Sbjct 54097663 CAAATAAAGGCATATCTTCTGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCT 54097722 Query 41753 TCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 41809 | || ||||| |||||||| | || || || || || | || || || || ||| Sbjct 54097723 GTTGGATTCGACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTA 54097782 Query 41810 GTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 41853 ||||| ||||| | ||| ||||| ||||| || ||||| ||||| Sbjct 54097783 GTCTTCCCTTCTAGTGAAATATTCTCCATAAAGTCAAATGGATT 54097826 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 42326 TCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCC 42385 ||||||| || || || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 54101125 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 54101184 Query 42386 ATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTC 42444 || || || || |||||||| | || || |||| || |||||| | |||||| || Sbjct 54101185 ATTTGGAAGCCATAGAAACAGCGTGCTTCTGTAATTTGAACTTCTTGGCTAAATCGCTC 54101243 >seq4 Length=67649338 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| | Sbjct 16418169 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATG 16418110 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 ||||||||||| |||| || ||||||||||| ||||| ||||| || || | | || | Sbjct 16418109 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 16418050 Query 71263 CTATTTCTAAGACCAT 71278 || ||||| | ||||| Sbjct 16418049 CTGTTTCTTACACCAT 16418034 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| || || || |||||||| || |||||| |||| |||| || || || || || | Sbjct 16420953 TCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGTATGT 16420894 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 ||| ||||| |||||||||||||| || || || ||||| |||||||| | | || | Sbjct 16420893 TCAAAGACTGGCTTTGATCGATGAAAGCACCTCTCTCTGCTGCCATTTTGAGAACAGTTT 16420834 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | || | |||||||| | ||| ||||||| | |||||| || || |||| Sbjct 16420833 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTAAGGTCATCAGGAA 16420783 Score = 116 bits (128), Expect = 5e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || |||||||| |||||||| |||||||||||||| | || ||||| |||| || ||| Sbjct 16406665 ACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCGCTGC 16406606 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 ||||| |||||||| ||||| || | ||| |||||| | | || || ||||||| ||| Sbjct 16406605 TCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGT 16406546 Query 72142 TCCAAGTATATGGC 72155 |||| ||| || || Sbjct 16406545 TCCAGGTAAATAGC 16406532 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 71381 CATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCAT 71440 |||| || || ||||| || | | | ||||| ||||| || || || | ||||||| Sbjct 16412753 CATAGGTTTCATATGGGCCATGCTCCTTTGCTAGGTCACAGCTGGCTTCCAGGGCTCCAT 16412694 Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500 ||||||| ||||| || |||| |||||| || || || || || || ||||| || | Sbjct 16412693 AATAAATAGTTTCAAAGATCTGCTTATTCAGTAACTGGGCCTCTGGACTCTCAAAAGGGT 16412634 Query 71501 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTC 71560 | | | || ||||| || ||||| | || ||||| ||||| || ||||| | || | Sbjct 16412633 ATCTCATCAGGATAAAAGCATCTGCCAGACCCTGAACCCCAATTCCAATAGGGCGATGGC 16412574 Query 71561 TCTTATTAGA 71570 ||||| || Sbjct 16412573 GTTTATTTGA 16412564 >seq87 Length=7156779 Score = 109 bits (120), Expect = 7e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGC 42384 |||||||| || || || || | ||||||||||||| ||||| |||||||| |||| Sbjct 718051 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTTAGAATGCATGTTTTCTGTGGC 718110 Query 42385 CATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTC 42444 | || || || |||||||| | | || |||| || |||||| | ||||| ||| Sbjct 718111 AACTTGGAAGCCATAGAAACAGCACACTTCTGTAATTTGAACTTCTTGGCTAAATCATTC 718170 Query 42445 AGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 42504 | |||||||| || ||| || ||||| |||||||| || |||| ||| | ||| Sbjct 718171 CACCAAATTTTCATTTGTTATGCCATCACTTGCTGCAAAGAAAGCCAGAACAAGCAATAT 718230 Query 42505 AAAATATTTTTCGTCCGG 42522 ||||||| ||| || || Sbjct 718231 AAAATATCGTTCCTCAGG 718248 >seq12166 Length=2209 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 41696 CAAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCT 41752 |||||| ||||| || |||| ||||||||||| |||| || | |||| ||| ||| Sbjct 2030 CAAATAAAGGCATATCTTCTGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCT 2089 Query 41753 TCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 41809 | || ||||| |||||||| | || || || || || | || || || || ||| Sbjct 2090 GTTGGATTCGACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTA 2149 Query 41810 GTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 41853 ||||| ||||| | ||| ||||| ||||| || ||||| ||||| Sbjct 2150 GTCTTCCCTTCTAGTGAAATATTCTCCATAAAGTCAAATGGATT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671017195282680