Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11-
20] 14,543 sequences; 2,510,587,379 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq151 87.8 2e-12
>seq151
Length=1038780
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/203 (70%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 164502 AGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATT 164561
||| ||||||||| | ||||| ||| | ||| |||| || || ||||| ||||| || |
Sbjct 166208 AGGTTGTAAACATGTTAAAGGCATTCTGTTATATGGGCCCCCAGGTTGTGGTAAGACTCT 166149
Query 164562 AATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAATGG 164618
|||||||| |||| |||| | || ||| | || || ||| | || |||||
Sbjct 166148 CTTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGAGAGCCC--AAAGTGGTCAATGG 166092
Query 164619 TCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678
|| ||| | | ||||||||||| || || ||||| ||||| || | || | |||
Sbjct 166091 GCCAGAAATCCTCAACAAATATGTGGGAGAATCAGAGGCTAACATTCGCAAACTTTTTGC 166032
Query 164679 GGAGGCTGAAGAAGAACAAAAGA 164701
|| |||||||| || |||| ||
Sbjct 166031 TGATGCTGAAGAGGAGCAAAGGA 166009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595763677918800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |