Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11- 20] 14,543 sequences; 2,510,587,379 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq161 307 1e-78 seq67 203 4e-47 seq58 185 1e-41 seq13 158 2e-33 seq87 132 6e-26 seq4 122 1e-22 seq7 120 4e-22 seq19 107 2e-18 seq12166 95.1 2e-14 >seq161 Length=830332 Score = 307 bits (340), Expect = 1e-78 Identities = 630/937 (67%), Gaps = 36/937 (4%) Strand=Plus/Plus Query 32951 TGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTC 33007 |||| ||||||||| | |||| || | |||| ||||||| | || ||||| |||| Sbjct 529761 TGTTCATTTAAAAGTTAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTC 529820 Query 33008 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATA 33067 |||| | || || | || || | || || || || ||||| || ||||| | ||| | Sbjct 529821 CCATCCTCTGATACTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCTAGTGAAA 529880 Query 33068 TATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAG 33127 |||| ||||| || ||||| ||||| || || ||| || ||||| |||| || Sbjct 529881 TATTCTCCATAAAGTCAAATGGATTTTCTACTTTGAAAACCTTGTTAAAGCCCAGCTCCA 529940 Query 33128 AAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA 33187 || | ||||| || || || || || || ||||||| |||||||| || | Sbjct 529941 GCATAAGCCTATCTGCCACAAAGTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCAA 530000 Query 33188 TAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA 33247 | || || | || | || | || || || | ||||| || | || |||| | | Sbjct 530001 TTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACGCCTGTTCTATTGTGACAGCAT---TGA 530057 Query 33248 TAATAGAT-CTAACGGTTTCTTCACTC--GGTGGATGCAATAAATGTTTAAACATCAAAC 33304 |||| | | || | ||| | || ||| |||| | ||||| ||||||| | Sbjct 530058 TAATTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGCAGCAGGTGTTTGAACATCAGGC 530117 Query 33305 ATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTC 33364 | || || || ||||| | ||||| ||| | ||||| ||||| |||||||| ||||| | Sbjct 530118 AGGCAAAGTCACAGTGTAAGCCCTCATCTTTGCTAATAAGTTCATTGGAAAATGTGAGGC 530177 Query 33365 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGA 33424 | ||||| || || || || || ||| ||||||||||| Sbjct 530178 CAGGCATCAGTCCTCGTTTCTTGAGC-----------------------AGAAAAGAAGA 530214 Query 33425 TTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTA 33481 |||| || || ||||||||||| | || | |||||||| | | | |||| | Sbjct 530215 TTCCCTCCACAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAA 530274 Query 33482 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAA 33541 || | ||||||||||| ||||| || ||||||||||| ||| | |||||||| | Sbjct 530275 TCAAACGCAAGGCCCAATCGGCTTTCTTCTTCACACAAGGCATTGTTACAATGGCATTGA 530334 Query 33542 AGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTT 33601 ||||| | | |||| || ||||||| ||||| || || | ||||||||||||| Sbjct 530335 AGAGAAATTCCCTTTCTTTGGAGTCTTTAATGTAAGTGTCAATAAGGAGACTATACATTT 530394 Query 33602 CCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 33661 | ||||| |||||||| ||||| || || || || ||||||| | || || ||||| | Sbjct 530395 CAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATTT 530454 Query 33662 GTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 33721 | |||||| | |||||| ||| ||||||| ||||| ||||| || ||||| || ||| Sbjct 530455 GAACTTCTTGGCTAAATCGCTCCACCAAATTCTCATTTACTATGCCATCACTTGCCGCAG 530514 Query 33722 AAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCAT 33781 | || |||| | || |||||||||| ||| || || | || | ||| | | Sbjct 530515 AGAAAGCCAGAAAGTGGGATATAAAATATCATTCCTCAGGCTTCAGGGCTTCCCAGTGCT 530574 Query 33782 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 33841 || || | || | | | || || || |||||||||| || ||||| || || ||| Sbjct 530575 GAATGTCCCTGGA-AGAGCCACCTCCTCGGCTGTCCAAAAGGAAGCCTCAGCTTTATTAC 530633 Query 33842 ACATGTTCCAGATGTCATAATATTGGATTGGGAAAAT 33878 |||| | |||||| ||| |||| || || || || Sbjct 530634 ACATCTGCCAGATACCATGGTATTCCATAGGAAAGAT 530670 >seq67 Length=10555288 Score = 203 bits (224), Expect = 4e-47 Identities = 566/864 (66%), Gaps = 16/864 (2%) Strand=Plus/Minus Query 33034 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 33093 || || || ||||| ||||| || || || || || |||||||| |||||||| ||||| Sbjct 3668870 TTCTCAAAGAAATTTGTTTTCCCATCTAAAGAAATGTTTTCCATAAAATCAAAGGGATTT 3668811 Query 33094 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCT 33153 | | | ||| ||| ||||| | ||| || ||||| || || || ||||| Sbjct 3668810 TCTGCCTGAAAAACCTTTGAGAATCCAAGTTCCACAAGTAATCTTTCAGCTACAAATTCA 3668751 Query 33154 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA 33213 ||||| |||||| |||| ||||| | || || |||||| | | | || Sbjct 3668750 ATATACTGGCTCATCAAAACACAGTTCATCCTAATGAGGCCAACTGGCAAGTCTTCTGTT 3668691 Query 33214 AGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCT-----AACGGTTTCTT 33268 | ||| || || ||||| || |||| | | ||| ||||| | | |||||| Sbjct 3668690 AAAAACTCCTGCTCAATTTTGACAGCAT---TAACAAT-GATCTCCCTCACCCTTTTCTT 3668635 Query 33269 CACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 33328 | | || | ||| | | |||||| | || || || || || | || | | Sbjct 3668634 CTGAAGTCTTATTTACTAAGTACTGAAACATTAGGCAAGCAAAGTCATAGAGAAGTTCTT 3668575 Query 33329 CGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAA 33388 | ||||| | || || || ||| |||| |||||||| || || | || | ||| || | Sbjct 3668574 CATCTCTGTTGATCAGCTCATTGAAAAATGTGAGTCCAGGGATGGGACCTCTCTTCTTTA 3668515 Query 33389 GCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 ||| || || | ||| || ||||| || ||||| |||||||| || ||| | ||| | Sbjct 3668514 ACCAGAAAATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCACTGATGGCCA 3668455 Query 33449 TAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 33505 | ||| || ||| || | || || |||||| | ||||| || | | Sbjct 3668454 CCACTCTTTCCCCAAAAGTAGACTTTCTATCTGCTATCCATCACAGGGCCCAGTCTGTTT 3668395 Query 33506 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTAT 33565 | || || || | ||||| |||| || |||||||| | | | || || || || Sbjct 3668394 TTTTCTTAACGTATGGCATTGTTTTAATTGCATTAAATAAAAATTTCCCTTTCTTGGGAT 3668335 Query 33566 CTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 33625 || | | |||||| || | | ||| || || | || |||| || | ||| | Sbjct 3668334 CTCTGATTCTAGTATCTATTAGCAAACTGTATATCTTTGAGTGAACATTCTTTATGAGAA 3668275 Query 33626 TCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCG 33685 | ||||| || |||||||| | |||||| | || || || || || ||| | ||| Sbjct 3668274 TTTGAAAACCATAGAAACAGCAAGCCTCTGAAACTTGCACCTCCTGACTAAAGCTCTCCA 3668215 Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGC---AAAAAACGCCAATACATGTTTTA 33742 ||||||||||||| | |||| ||||||| ||| |||||| || || | ||| | Sbjct 3668214 CCAAATTTTCATTTCCATTTCCATCACTGGTTGCAAAAAAAAAAGCTAAGATATGAGAGA 3668155 Query 33743 TAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATA-TCT 33801 |||||| || || |||| | | || || ||| | | | || ||| || |||| | || Sbjct 3668154 GAAAATAATTCTCATCTGATTTAAGCTTGTTCTAGTGAAGGAGATCCTTTGATAAAGTCA 3668095 Query 33802 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAA 33861 || ||||| ||||||| || ||||||| ||||| || |||||| ||||| || || Sbjct 3668094 ACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTCATACATTTTCCAAATATCGGGG 3668035 Query 33862 TATTGGATTGGGAAAATAACAAAT 33885 || || ||||| || || |||||| Sbjct 3668034 TACTGAATTGGAAATATGACAAAT 3668011 >seq58 Length=13050397 Score = 185 bits (204), Expect = 1e-41 Identities = 621/949 (65%), Gaps = 26/949 (3%) Strand=Plus/Plus Query 32948 TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAA 33004 || |||| |||| || ||| |||| || | |||| ||| || | || ||||| Sbjct 9035705 TTCTGTTCATTTAGAAATCAGCATCCAAGGTAAAAGAATTCCCTGTTGGATTTGACATCT 9035764 Query 33005 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATG 33064 ||||||| | || || ||||| || || || || || ||| | || |||| || Sbjct 9035765 CTCCCATCCTCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCTG-TG 9035823 Query 33065 ATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA-T 33123 | ||||| ||||| || ||| | ||||| || | ||| || |||| |||| | Sbjct 9035824 AAATATTCTCCATAAAGTCAGATGGATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCT 9035883 Query 33124 TCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATT 33183 ||| | | | || || || |||||||| ||||| ||||||| || ||||| Sbjct 9035884 TCATCA-TAAGCCTGTCTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTCATC 9035942 Query 33184 CCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCT 33243 || | | || || || | ||| | | || || || ||||| | | || |||| | Sbjct 9035943 CCAGTGAACTTCACAGGCAAGGCCTCCATGAGGAACTCCTGTTCTAAGCTGACAGCAT-T 9036001 Query 33244 GTTATAATAGATCTA--ACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATC 33300 | || |||| ||| || | | || || | | | | || | | ||||| |||||| Sbjct 9036002 GATA-AATATTTCTTTTACTCTCTGCTCCAATGGTTTG-TGTAGCAGGTGTTTGAACATC 9036059 Query 33301 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTG 33360 | || || | || || | | |||||| ||||| ||||| ||||| |||||| | Sbjct 9036060 AGGCAGGCAGAGTCACAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAAC--TT 9036117 Query 33361 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAG 33420 || || ||||| | || | || || | | | ||||| || | || || || | ||| Sbjct 9036118 AGGCCAGGCATCAATCCCCATTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAG 9036177 Query 33421 AAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCA 33477 ||| ||||||| || || |||||||| | || | |||| || | | | |||| Sbjct 9036178 AAGTTTCCTTCCACAGCGGCAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCC 9036237 Query 33478 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 33537 ||||| | || ||| | ||||| |||||| |||| || ||||| |||||| Sbjct 9036238 CCAATCCAATGCAAGACCTAATTTACTTTCTTCTTTACATAAGGTATTGTTTCAATGGCA 9036297 Query 33538 TTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 33597 || |||||| | | |||| || |||||||| || || || | ||||||||| Sbjct 9036298 TTGAAGAGAAATTCCCTTTCTTTGAAATCTTTAA-----GTGTCAATAAGGAGACTATAC 9036352 Query 33598 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 33657 ||||| |||| | |||||| ||||| || || || | |||||||| | | || ||| Sbjct 9036353 ATTTCACAATGTA-GTTTTCCATGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTA 9036411 Query 33658 ATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCT 33717 || || ||||| | |||| ||| ||||||||||||| | ||| || ||||| ||| Sbjct 9036412 ATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATTTATTATGCCATCACTTGCT 9036471 Query 33718 GCAAA-AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCA 33776 ||||| ||| | | ||| ||||||||| | | || | | | || |||| Sbjct 9036472 GCAAAGAAATTCATAATTATGAGACATAAAATATCATACCTCAGATTTCAG-GGCTTCCT 9036530 Query 33777 ATCATTG-ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835 | || | || || || || ||| |||| | || ||||| |||| || | || |||| Sbjct 9036531 AGTATAGAATGTCCTTGGAAATAGCTACCACCTCTTCTGTCAAAAAGGAACCTTCAGCCT 9036590 Query 33836 TTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | ||| | || | ||| || |||| ||| ||| || || | ||||| Sbjct 9036591 TCTTAGAAATCTGCCAAATATCATGGTATCTGATAGGAAAGAAGACAAA 9036639 >seq13 Length=48154242 Score = 158 bits (174), Expect = 2e-33 Identities = 352/520 (68%), Gaps = 29/520 (6%) Strand=Plus/Minus Query 33327 CTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 33386 ||| ||||| ||||| ||||| ||||||| ||||| || ||||| || | | || || Sbjct 23470804 CTCATCTCTGCTAATAAGTTCACTGGAAAATGTGAGACCAGGCATCAGCCATCATTTCTT 23470745 Query 33387 AAGCCAAAATATG--GAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33444 |||||| ||||| || || || || ||||||| ||||||| |||| || ||||||| Sbjct 23470744 AAGCCAGAATATACTGATGCAAAAGAACCAGAAAGGAAGATTTCTTCCACATTAGCAAAG 23470685 Query 33445 GCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCC 33504 || | | |||| || || | | | ||||| || || |||| | Sbjct 23470684 GCTACATCATGCTCTTCACAAATAGACTTTT----TATCCTGATT----CCAAATCTGTT 23470633 Query 33505 TTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTA 33564 ||||| || |||||||||||| |||| || |||| |||| | | | |||||| || | Sbjct 23470632 TTCTTCTTCACACAAGGCATCATTTCAGTGCCATTGAAGATAAATTCTTTTTCTTTGGAA 23470573 Query 33565 TCTTTAACATAAGTATCGATCAAAAG---ACTATACATTTCCGAATGAATGTTTTCAATG 33621 | ||| ||| | ||| | ||| ||| |||||| | ||||| || ||| | ||| Sbjct 23470572 TTTTT------AGTGT-GATAATAAGGAAACTGTACATTACAGAATGTATTTTTCCTATG 23470520 Query 33622 GCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGT 33681 || || || ||||| |||||||| || || ||||| || | |||| | |||| | Sbjct 23470519 GCAATTTGGAATCCATAGAAACAGTGGGCTTCTGTAATTTGAATTTCTTGGCTAAATTGC 23470460 Query 33682 TCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 33741 | | |||| |||||| | ||| | |||| |||| |||| |||| |||||| | Sbjct 23470459 TTCACCAATTTTTCACGTATTATGCTATCAC---CTGCTAAAA--GCCAGAACATGTGCT 23470405 Query 33742 ATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTT--TAGATATAT 33799 ||||||| | | || || | | || |||| | |||| || || | | | || Sbjct 23470404 ATAAAATCTCTCTCCTCAAGCTTCAG-GGCTTCCCAGGGTTGA-ATGTTCCTGAAGAGAT 23470347 Query 33800 CTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 33839 |||| || | ||||||||||| || ||||| || ||||| Sbjct 23470346 CTACCTCGTTAACTGTCCAAAAGGAAGCCTCAGCTTTTTT 23470307 >seq87 Length=7156779 Score = 132 bits (146), Expect = 6e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||||| ||||| || || | ||||||||||||| ||||| |||||||| |||| Sbjct 718051 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTTAGAATGCATGTTTTCTGTGGC 718110 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 | || || || |||||||| | | || ||||| || |||||| | ||||| ||| Sbjct 718111 AACTTGGAAGCCATAGAAACAGCACACTTCTGTAATTTGAACTTCTTGGCTAAATCATTC 718170 Query 33684 CGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33743 | ||||||||||||| ||| || ||||| |||||||| || |||| ||| | ||| Sbjct 718171 CACCAAATTTTCATTTGTTATGCCATCACTTGCTGCAAAGAAAGCCAGAACAAGCAATAT 718230 Query 33744 AAAATATTTTTCGTCTGG 33761 ||||||| ||| || || Sbjct 718231 AAAATATCGTTCCTCAGG 718248 >seq4 Length=67649338 Score = 122 bits (134), Expect = 1e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| | Sbjct 16418169 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATG 16418110 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 ||||||||||| |||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 16418109 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 16418050 Query 62457 CTATTTCTAAGACCGTA 62473 || ||||| | ||| || Sbjct 16418049 CTGTTTCTTACACCATA 16418033 Score = 118 bits (130), Expect = 1e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271 || ||| |||||||| |||||||| |||||||||||||| | || ||||| |||| || Sbjct 16406669 CTCCACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCG 16406610 Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331 || ||||| |||||||| ||||| || | ||| |||||| | | || || ||||||| Sbjct 16406609 CTGCTCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 16406550 Query 63332 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364 ||||||| ||| || || | ||||||| || Sbjct 16406549 AGGTTCCAGGTAAATAGCAAATGCTCCAGGACG 16406517 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| || || || |||||||| || |||||| ||| | || || || ||||| || | Sbjct 16420953 TCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGTATGT 16420894 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 ||| ||| || |||||||||||||| || || || ||||| |||||||| | | || | Sbjct 16420893 TCAAAGACTGGCTTTGATCGATGAAAGCACCTCTCTCTGCTGCCATTTTGAGAACAGTTT 16420834 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 | || | |||||||| | ||| ||||||| | |||||| || || |||| Sbjct 16420833 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTAAGGTCATCAGGAA 16420783 >seq7 Length=60492774 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| ||||| ||||| |||||||| ||||| || ||||| || || || || | Sbjct 54099246 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 54099305 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| ||||| || || || || ||||||||||||||||| || || |||||||||| Sbjct 54099306 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 54099365 Query 33446 C 33446 | Sbjct 54099366 C 54099366 Score = 96.9 bits (106), Expect = 4e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 33565 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33624 ||||||| ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 54101125 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 54101184 Query 33625 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCC 33684 || || || || |||||||| | || || ||||| || |||||| | |||||| ||| Sbjct 54101185 ATTTGGAAGCCATAGAAACAGCGTGCTTCTGTAATTTGAACTTCTTGGCTAAATCGCTCC 54101244 Query 33685 GCC 33687 || Sbjct 54101245 ACC 54101247 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 32935 CAAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCT 32991 |||||| ||||| || |||| ||||||||||| |||| || | |||| ||||||| Sbjct 54097663 CAAATAAAGGCATATCTTCTGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCT 54097722 Query 32992 TCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 33048 | || ||||| |||||||| | || || || || || | || || || || ||| Sbjct 54097723 GTTGGATTCGACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTA 54097782 Query 33049 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 33092 || || ||||| | ||| ||||| ||||| || ||||| ||||| Sbjct 54097783 GTCTTCCCTTCTAGTGAAATATTCTCCATAAAGTCAAATGGATT 54097826 >seq19 Length=38427206 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| || || ||||| |||||||| ||||| || ||||| || || | ||| || Sbjct 3916227 TCATCTCTGCTGATCAGTTCATTGGAAAATGTGAGCCCAGGCATGAGACCTCTCTTCTTT 3916286 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33447 | ||| ||||| | ||| || ||||| || ||||| |||||||| || |||||||||||| Sbjct 3916287 AACCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGGCA 3916346 Query 33448 ATAAGTCTCTCTCC 33461 | | ||| || || Sbjct 3916347 ACCACTCTTTCCCC 3916360 >seq12166 Length=2209 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 32935 CAAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCT 32991 |||||| ||||| || |||| ||||||||||| |||| || | |||| ||||||| Sbjct 2030 CAAATAAAGGCATATCTTCTGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCT 2089 Query 32992 TCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 33048 | || ||||| |||||||| | || || || || || | || || || || ||| Sbjct 2090 GTTGGATTCGACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTA 2149 Query 33049 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 33092 || || ||||| | ||| ||||| ||||| || ||||| ||||| Sbjct 2150 GTCTTCCCTTCTAGTGAAATATTCTCCATAAAGTCAAATGGATT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622833955985880