Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11- 20] 14,543 sequences; 2,510,587,379 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq161 84.2 2e-11 >seq161 Length=830332 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 119632 CTCCGAACCGCTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAG 119691 |||| | || || |||| ||| || | || ||||| || |||||||| || || || | Sbjct 529818 CTCCCATCCTCTGATACTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCTAGTG 529877 Query 119692 ATATGTTATTCATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACT 119751 | || || | |||||| || || |||||| | |||||| ||||| |||||| || Sbjct 529878 AAATATTCTCCATAAAGTCAAATGGATTTTCTACTTTGAAAACCTTGTTAAAGCCCAGCT 529937 Query 119752 CGAACAACAGTCGATCTGCCACAAACTCGATGTA 119785 | | || || | |||||||||||| || ||||| Sbjct 529938 CCAGCATAAGCCTATCTGCCACAAAGTCAATGTA 529971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478575385158960