Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11- 20] 14,543 sequences; 2,510,587,379 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq161 302 6e-77 seq67 203 4e-47 seq58 176 6e-39 seq87 123 3e-23 seq4 122 1e-22 seq7 111 2e-19 seq19 102 1e-16 seq12166 89.7 7e-13 >seq161 Length=830332 Score = 302 bits (334), Expect = 6e-77 Identities = 628/937 (67%), Gaps = 36/937 (4%) Strand=Plus/Plus Query 32308 TGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTC 32364 |||| ||||||||| | |||| | | |||| ||| ||| | || ||||| |||| Sbjct 529761 TGTTCATTTAAAAGTTAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTC 529820 Query 32365 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATA 32424 |||| | || || | || || | || || || || ||||| || ||||||| ||| | Sbjct 529821 CCATCCTCTGATACTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCTAGTGAAA 529880 Query 32425 TATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAG 32484 |||| ||||| || || |||||||| || || ||| || ||||| |||| || Sbjct 529881 TATTCTCCATAAAGTCAAATGGATTTTCTACTTTGAAAACCTTGTTAAAGCCCAGCTCCA 529940 Query 32485 AAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA 32544 || | |||||||| ||||| || || || ||||||| |||||||| || | Sbjct 529941 GCATAAGCCTATCTGCCACAAAGTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCAA 530000 Query 32545 TAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA 32604 | || || | || | || | || || || | ||||| || | ||| || | | | Sbjct 530001 TTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACGCCTGTTCTATTGTGACAGCAT---TGA 530057 Query 32605 TAATAGATC---TTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAAC 32661 |||| | | ||||| | | || ||| | || | ||||| ||||||| | Sbjct 530058 TAATTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGCAGCAGGTGTTTGAACATCAGGC 530117 Query 32662 ATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTC 32721 | || || || ||||||| ||||| ||| | ||||| | ||| |||||||| ||||| | Sbjct 530118 AGGCAAAGTCACAGTGTAAGCCCTCATCTTTGCTAATAAGTTCATTGGAAAATGTGAGGC 530177 Query 32722 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAA 32781 | ||||| || || || || || ||| ||||||||| | Sbjct 530178 CAGGCATCAGTCCTCGTTTCTTGAGC-----------------------AGAAAAGAAGA 530214 Query 32782 TTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTA 32838 |||| || || || |||||||| | || | |||||||| | | | |||| | Sbjct 530215 TTCCCTCCACAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAA 530274 Query 32839 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAA 32898 || | ||||||||||| ||||| || |||||||||||||| | || ||||| | Sbjct 530275 TCAAACGCAAGGCCCAATCGGCTTTCTTCTTCACACAAGGCATTGTTACAATGGCATTGA 530334 Query 32899 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTT 32958 ||||| | | |||| || ||||||| || || ||||| | ||||||||||||| Sbjct 530335 AGAGAAATTCCCTTTCTTTGGAGTCTTTAATGTAAGTGTCAATAAGGAGACTATACATTT 530394 Query 32959 CCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCT 33018 | ||||| |||||||| ||||| ||||| || || ||||| | | || || ||||| | Sbjct 530395 CAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATTT 530454 Query 33019 GTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 33078 | |||||| | |||||| || | ||||| ||||| ||||| || ||||| || ||| Sbjct 530455 GAACTTCTTGGCTAAATCGCTCCACCAAATTCTCATTTACTATGCCATCACTTGCCGCAG 530514 Query 33079 AAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCAT 33138 | || |||| | || |||||||||| ||| || || | || | ||| | | Sbjct 530515 AGAAAGCCAGAAAGTGGGATATAAAATATCATTCCTCAGGCTTCAGGGCTTCCCAGTGCT 530574 Query 33139 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 33198 || || | || | | |||| || || |||||||||| || ||||| || || ||| Sbjct 530575 GAATGTCCCTGGA-AGAGCCACCTCCTCGGCTGTCCAAAAGGAAGCCTCAGCTTTATTAC 530633 Query 33199 ACATATTCCAGATGTCATGATATTGAATTGGAAAAAT 33235 |||| | |||||| |||| |||| || ||||| || Sbjct 530634 ACATCTGCCAGATACCATGGTATTCCATAGGAAAGAT 530670 >seq67 Length=10555288 Score = 203 bits (224), Expect = 4e-47 Identities = 566/864 (66%), Gaps = 16/864 (2%) Strand=Plus/Minus Query 32391 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTG 32450 || || || ||||| ||||| || ||||| || || |||||||| ||||| || ||||| Sbjct 3668870 TTCTCAAAGAAATTTGTTTTCCCATCTAAAGAAATGTTTTCCATAAAATCAAAGGGATTT 3668811 Query 32451 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCT 32510 | | | ||| ||| ||||| | ||| || ||||| || || |||||||| Sbjct 3668810 TCTGCCTGAAAAACCTTTGAGAATCCAAGTTCCACAAGTAATCTTTCAGCTACAAATTCA 3668751 Query 32511 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA 32570 ||||| |||||| |||| ||||| | || || |||||| | | | || Sbjct 3668750 ATATACTGGCTCATCAAAACACAGTTCATCCTAATGAGGCCAACTGGCAAGTCTTCTGTT 3668691 Query 32571 AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTG-----TTTCTT 32625 | ||| || || ||||| ||| || | | | ||| ||||| || |||||| Sbjct 3668690 AAAAACTCCTGCTCAATTTTGACAGCAT---TAACAAT-GATCTCCCTCACCCTTTTCTT 3668635 Query 32626 CACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 32685 | | || | ||| | | |||||| | || || || || || | || | | Sbjct 3668634 CTGAAGTCTTATTTACTAAGTACTGAAACATTAGGCAAGCAAAGTCATAGAGAAGTTCTT 3668575 Query 32686 CGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAA 32745 | ||||| | || | || ||| |||| |||||||| || || | || | ||| || | Sbjct 3668574 CATCTCTGTTGATCAGCTCATTGAAAAATGTGAGTCCAGGGATGGGACCTCTCTTCTTTA 3668515 Query 32746 GCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805 ||| || || | ||||| ||||| || |||||||||||||| || || | ||| | Sbjct 3668514 ACCAGAAAATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCACTGATGGCCA 3668455 Query 32806 TAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 32862 | ||| || ||| || | || || |||||| | ||||| || | | Sbjct 3668454 CCACTCTTTCCCCAAAAGTAGACTTTCTATCTGCTATCCATCACAGGGCCCAGTCTGTTT 3668395 Query 32863 TCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTAT 32922 | || || || | |||||||| | || |||||||| | | | || || || || Sbjct 3668394 TTTTCTTAACGTATGGCATTGTTTTAATTGCATTAAATAAAAATTTCCCTTTCTTGGGAT 3668335 Query 32923 CTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 32982 || | | ||||| || | | ||| || || | || |||| || | ||| | Sbjct 3668334 CTCTGATTCTAGTATCTATTAGCAAACTGTATATCTTTGAGTGAACATTCTTTATGAGAA 3668275 Query 32983 TTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTG 33042 ||||||| || ||||| || | |||||| | || || || || || ||| | || Sbjct 3668274 TTTGAAAACCATAGAAACAGCAAGCCTCTGAAACTTGCACCTCCTGACTAAAGCTCTCCA 3668215 Query 33043 CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC---GCCAATACATGTTTTA 33099 | ||||||||||| | |||| ||||||| ||||||||| || || | ||| | Sbjct 3668214 CCAAATTTTCATTTCCATTTCCATCACTGGTTGCAAAAAAAAAAGCTAAGATATGAGAGA 3668155 Query 33100 TAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATA-TCC 33158 |||||| || || |||| | | || || ||| | | | || ||| || |||| | || Sbjct 3668154 GAAAATAATTCTCATCTGATTTAAGCTTGTTCTAGTGAAGGAGATCCTTTGATAAAGTCA 3668095 Query 33159 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 33218 || ||||| ||||||| || ||||||| ||||| || |||||| ||||| || || | Sbjct 3668094 ACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTCATACATTTTCCAAATATCGGGG 3668035 Query 33219 TATTGAATTGGAAAAATAACAAAT 33242 || ||||||||||| || |||||| Sbjct 3668034 TACTGAATTGGAAATATGACAAAT 3668011 >seq58 Length=13050397 Score = 176 bits (194), Expect = 6e-39 Identities = 619/949 (65%), Gaps = 26/949 (3%) Strand=Plus/Plus Query 32305 TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAA 32361 || |||| |||| || ||| |||| | | |||| ||| || | || ||||| Sbjct 9035705 TTCTGTTCATTTAGAAATCAGCATCCAAGGTAAAAGAATTCCCTGTTGGATTTGACATCT 9035764 Query 32362 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATG 32421 ||||||| | || || ||||| || || || || || ||| | || ||||| || Sbjct 9035765 CTCCCATCCTCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCTG-TG 9035823 Query 32422 ATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAA-T 32480 | ||||| ||||| || || ||||||| || | ||| || |||| |||| | Sbjct 9035824 AAATATTCTCCATAAAGTCAGATGGATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCT 9035883 Query 32481 TCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 32540 ||| | | | || ||||| || ||||| ||||| ||||||| || ||||| Sbjct 9035884 TCATCA-TAAGCCTGTCTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTCATC 9035942 Query 32541 CCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCT 32600 || | | || || || | ||| | | || || || ||||| | ||| || | | Sbjct 9035943 CCAGTGAACTTCACAGGCAAGGCCTCCATGAGGAACTCCTGTTCTAAGCTGACAGCAT-T 9036001 Query 32601 GTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATC 32657 | || |||| |||| ||| | | || || | | | | | | | ||||| |||||| Sbjct 9036002 GATA-AATATTTCTTTTACTCTCTGCTCCAATGGTTTG-TGTAGCAGGTGTTTGAACATC 9036059 Query 32658 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTG 32717 | || || | || || ||| |||||| ||||| ||||| | ||| |||||| | Sbjct 9036060 AGGCAGGCAGAGTCACAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAAC--TT 9036117 Query 32718 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAG 32777 || || ||||| | || | || || | | | ||||| || |||| || || | ||| Sbjct 9036118 AGGCCAGGCATCAATCCCCATTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAG 9036177 Query 32778 AAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCA 32834 || ||||||| || || |||||||| | || | |||| || | | | |||| Sbjct 9036178 AAGTTTCCTTCCACAGCGGCAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCC 9036237 Query 32835 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCA 32894 ||||| | || ||| | ||||| |||||| |||| ||||| || || ||| Sbjct 9036238 CCAATCCAATGCAAGACCTAATTTACTTTCTTCTTTACATAAGGTATTGTTTCAATGGCA 9036297 Query 32895 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 32954 || |||||| | | |||| || |||||||| || ||||| | ||||||||| Sbjct 9036298 TTGAAGAGAAATTCCCTTTCTTTGAAATCTTTAA-----GTGTCAATAAGGAGACTATAC 9036352 Query 32955 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTA 33014 ||||| |||| | |||||| ||||| ||||| || | ||||| || | | || ||| Sbjct 9036353 ATTTCACAATGTA-GTTTTCCATGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTA 9036411 Query 33015 ATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074 || || ||||| | |||| || | ||||||||||| | ||| || ||||| ||| Sbjct 9036412 ATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATTTATTATGCCATCACTTGCT 9036471 Query 33075 GCAAA-AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCA 33133 ||||| ||| | | ||| ||||||||| | | || | | | || |||| Sbjct 9036472 GCAAAGAAATTCATAATTATGAGACATAAAATATCATACCTCAGATTTCAG-GGCTTCCT 9036530 Query 33134 ATCATTG-ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 | || | || || || || ||| | || | || ||||| |||| || | || |||| Sbjct 9036531 AGTATAGAATGTCCTTGGAAATAGCTACCACCTCTTCTGTCAAAAAGGAACCTTCAGCCT 9036590 Query 33193 TTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 | ||| | || | ||| || ||||| ||| || ||||| | ||||| Sbjct 9036591 TCTTAGAAATCTGCCAAATATCATGGTATCTGATAGGAAAGAAGACAAA 9036639 >seq87 Length=7156779 Score = 123 bits (136), Expect = 3e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||||| || || ||||| | ||||||||||||| ||||| |||||||| |||| Sbjct 718051 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTTAGAATGCATGTTTTCTGTGGC 718110 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040 | ||| || || ||||| || | | || ||||| || |||||| | ||||| ||| Sbjct 718111 AACTTGGAAGCCATAGAAACAGCACACTTCTGTAATTTGAACTTCTTGGCTAAATCATTC 718170 Query 33041 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33100 | ||||||||||| ||| || ||||| |||||||| || |||| ||| | ||| Sbjct 718171 CACCAAATTTTCATTTGTTATGCCATCACTTGCTGCAAAGAAAGCCAGAACAAGCAATAT 718230 Query 33101 AAAATATTTTTCGTCTGG 33118 ||||||| ||| || || Sbjct 718231 AAAATATCGTTCCTCAGG 718248 >seq4 Length=67649338 Score = 122 bits (134), Expect = 1e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| | Sbjct 16418169 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATG 16418110 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 ||||||||||| |||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 16418109 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 16418050 Query 62312 CTATTTCTAAGACCGTA 62328 || ||||| | ||| || Sbjct 16418049 CTGTTTCTTACACCATA 16418033 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| || || || |||||||| || |||||| ||| | || || || ||||| || | Sbjct 16420953 TCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGTATGT 16420894 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 ||| ||| || |||||||||||||| || || || ||||| |||||||| | || || | Sbjct 16420893 TCAAAGACTGGCTTTGATCGATGAAAGCACCTCTCTCTGCTGCCATTTTGAGAACAGTTT 16420834 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 | || | |||||||| | ||| ||||||| | |||||| || || |||| Sbjct 16420833 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTAAGGTCATCAGGAA 16420783 Score = 118 bits (130), Expect = 1e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126 || ||| |||||||| |||||||| |||||||||||||| | || ||||| |||| || Sbjct 16406669 CTCCACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCG 16406610 Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186 || ||||| |||||||| ||||| || | ||| |||||| | | || || ||||||| Sbjct 16406609 CTGCTCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 16406550 Query 63187 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63219 ||||||| ||| || || | ||||||| || Sbjct 16406549 AGGTTCCAGGTAAATAGCAAATGCTCCAGGACG 16406517 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| || | ||| |||||||||||||| | || || || || ||||| || || | | Sbjct 16395537 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATTCTTGCTGCCAAGA 16395478 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 ||||||| || || || | ||||| | || || ||| |||| || |||||||| || | Sbjct 16395477 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAGAGTATCTA 16395418 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||| || || || || ||| | |||| |||||||| || ||||| Sbjct 16395417 GTTCCACTGTGGTAACTCCACTGTATAAGCCTTGGATTACTTTCAT 16395372 >seq7 Length=60492774 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || | Sbjct 54099246 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 54099305 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||||| ||||| || ||||| || ||||||||||| ||||| || || || ||||||| Sbjct 54099306 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 54099365 Query 32803 C 32803 | Sbjct 54099366 C 54099366 Score = 93.3 bits (102), Expect = 5e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 32922 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 32981 ||||||| || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 54101125 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 54101184 Query 32982 ATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040 ||||| || || ||||| || | || || ||||| || |||||| | |||||| || Sbjct 54101185 ATTTGGAAGCCATAGAAACAGCGTGCTTCTGTAATTTGAACTTCTTGGCTAAATCGCTC 54101243 Score = 89.7 bits (98), Expect = 7e-13 Identities = 119/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 32292 CAAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCT 32348 |||||| ||||| || |||| ||||||||||| |||| | | |||| ||| ||| Sbjct 54097663 CAAATAAAGGCATATCTTCTGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCT 54097722 Query 32349 TCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 32405 | || ||||| |||||||| | || || || || || | || || || || ||| Sbjct 54097723 GTTGGATTCGACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTA 54097782 Query 32406 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATT 32449 || || ||||||| ||| ||||| ||||| || || |||||||| Sbjct 54097783 GTCTTCCCTTCTAGTGAAATATTCTCCATAAAGTCAAATGGATT 54097826 >seq19 Length=38427206 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744 || ||||| || || | ||| |||||||| ||||| || ||||| || || | ||| || Sbjct 3916227 TCATCTCTGCTGATCAGTTCATTGGAAAATGTGAGCCCAGGCATGAGACCTCTCTTCTTT 3916286 Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 32804 | ||| ||||| | ||||| ||||| || |||||||||||||| || || ||||||||| Sbjct 3916287 AACCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGGCA 3916346 Query 32805 ATAAGTCTCTCTCC 32818 | | ||| || || Sbjct 3916347 ACCACTCTTTCCCC 3916360 Score = 86.0 bits (94), Expect = 8e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 33159 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 33218 || ||||| ||||||| || ||||||| ||||| ||||||||| ||||| || ||| | Sbjct 3927091 ACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCAGGG 3927150 Query 33219 TATTGAATTGGAAAAATAACAAATC 33243 || || ||||||||||| ||||||| Sbjct 3927151 TACTGGATTGGAAAAATGACAAATC 3927175 >seq12166 Length=2209 Score = 89.7 bits (98), Expect = 7e-13 Identities = 119/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 32292 CAAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCT 32348 |||||| ||||| || |||| ||||||||||| |||| | | |||| ||| ||| Sbjct 2030 CAAATAAAGGCATATCTTCTGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCT 2089 Query 32349 TCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 32405 | || ||||| |||||||| | || || || || || | || || || || ||| Sbjct 2090 GTTGGATTCGACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTA 2149 Query 32406 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATT 32449 || || ||||||| ||| ||||| ||||| || || |||||||| Sbjct 2150 GTCTTCCCTTCTAGTGAAATATTCTCCATAAAGTCAAATGGATT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633516813622800