Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11- 20] 14,543 sequences; 2,510,587,379 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq297 187 1e-41 seq85 187 1e-41 seq21 181 4e-40 seq492 178 5e-39 seq43 174 6e-38 seq533 163 1e-34 seq1196 156 2e-32 seq25 111 6e-19 seq91 105 3e-17 seq2 104 9e-17 seq48 96.9 1e-14 seq16 96.9 1e-14 >seq297 Length=157532 Score = 187 bits (206), Expect = 1e-41 Identities = 292/412 (71%), Gaps = 12/412 (3%) Strand=Plus/Minus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAA 451252 || || || ||||| || || | ||||| ||||||| || |||||||| |||||| Sbjct 552 AAACCATACATTCAGGTTGATATTGGAGGTGGGCAAACTAAGACATTTGCTCCAGAAGAA 493 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || ||||| |||| |||||||||||||| | || || ||| | || Sbjct 492 ATCTCTGCTATGATTCTCACTAAAATGAAAGAGATTGCTGAGGCTTATTTGGGAAAGAAG 433 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| | || ||||| |||||||| || ||||||| || Sbjct 432 GTTACCCATGCAGTTGTTACTGTATCAGCCTATTTTAATGATGC-CACTGGCAAGCGACC 374 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||||||| | |||||| | | || || ||||| ||||||||| Sbjct 373 AAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCA 314 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 |||||| | || ||||| || ||| || | || | ||| || ||||| | || Sbjct 313 GCTGCTATTGCTTATGGCCT-GGATAA--GAGGGA---GGGAGAGAAGAATATCCTGGTG 260 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG--AAGATGGGGTAT 451550 |||||| | ||||| ||||| || ||| | || | |||| || || || | Sbjct 259 TTTGATCTGGGTGGTGGAACCTTCTATGTGTCTCTTCTCCCCATTGACAATTTGATGTCT 200 Query 451551 TTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 ||||||| | ||| |||||| | |||||||||| ||| || ||||| |||| Sbjct 199 TTGAAGTCATGGCCACCAATAGAGATACTCATCGAGGTGGAGAAGACTTTGA 148 >seq85 Length=7583739 Score = 187 bits (206), Expect = 1e-41 Identities = 291/411 (71%), Gaps = 10/411 (2%) Strand=Plus/Minus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAA 451252 || || |||||||| || || | ||||| ||||||| || |||||||| |||||| Sbjct 7497575 AAACCATATATTCAGGTTGATGTTGGAGGTGGGCAAACTAAGACATTTGCTCCAGAAGAA 7497516 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || ||||| |||| |||||||||||||| || ||||| ||| | | Sbjct 7497515 ATCTCTGCTATGATTCTCACTAAAATGAAAGAGACTGCAGAGGCTTATTTGTGAAAGAAG 7497456 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| || || | ||| |||||||| || | ||| ||||| Sbjct 7497455 GTTACACATGCAGTTGTTACTGTACCAGCCTGTTTTAATGATGCCCAGCAGCAGGCAACC 7497396 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 ||| |||| ||| ||||||||| | |||||| | | || || ||||| ||||||||| Sbjct 7497395 AAAAATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCA 7497336 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 |||||| | || ||||| || ||| || | || | ||| || || || | || Sbjct 7497335 GCTGCTATTGCTTATGGCCT-GGATAA--GAGGGA---GGGAGAGAAGAACATACTGGTG 7497282 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 |||||| | ||||| ||||| || | ||| || | |||| ||||| || || Sbjct 7497281 TTTGATCTGGGTGGTGGAACCTTCTATGCATCTCATCTCACCATTGTCGATGGTGTCTTC 7497222 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| | ||| || ||||| ||||||||| ||| | ||||| ||||| Sbjct 7497221 GAAGTCATGGCCACTAATGGAGATACTCATGGGGGA-GAGAAGACTTTGAT 7497172 >seq21 Length=35249227 Score = 181 bits (200), Expect = 4e-40 Identities = 457/689 (66%), Gaps = 13/689 (2%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| || || || || | || ||||||| ||| |||||||| || | ||| |||| || Sbjct 399602 AGCCATAGGCATCGACTTGGGTACCACCTATTCTTGTGTAGGGGTGTTCCAGCATGGCAA 399543 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGT----T 451028 || || || || || |||||||| || || || || || || | || || | Sbjct 399542 GGTGGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCC--CA--GCTATGTGGCCT 399487 Query 451029 TTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCA 451088 | |||||| ||||| | ||| | ||| | || || ||| |||| ||| | Sbjct 399486 TCACGGATACAGAACGGCTTATTGGGGATGCAGCCAAAAACCAGGTAGCCATGAATCCTC 399427 Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 | ||||| || | |||||| |||||| | |||||| | | | | ||||| | ||| | Sbjct 399426 AGAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTTGTGC 399367 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208 | ||| | ||| | | ||| | | || | ||| || ||| |||||| | | | Sbjct 399366 AGTCAGATATGAAACTTTGGCCTTTTCAAGTGATCAATGAAGGAGGCAAGCCCAAGGTGC 399307 Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268 || |||||||| || | ||| |||| |||||||||||||| || ||||| Sbjct 399306 TGGTGTCCTATAAAGGGGAGAAAAAAGCTTTCTACCCTGAAGAAATTTCTTCAATGGTAT 399247 Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTT-ACTGATGCAGTA 451327 | ||||| ||||| ||||| ||||| | | | || | || | | || |||| || Sbjct 399246 TGACTAAGATGAAGGAAACTGCAGAGGCTTTTTTAGGC-CACCTGATCACCAATGCTGTG 399188 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 || ||||| || || ||||||||||| | ||||| || || || || |||||||| Sbjct 399187 ATCACTGTACCGGCCTATTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGTGTG 399128 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 ||||| || | ||||| || |||| || |||||||| ||||| ||||| | || ||| Sbjct 399127 ATTGCAGGACTCAATGTGCTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCGTAT 399068 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || ||| || | || | ||| | || | | | |||||||| |||||| Sbjct 399067 GGCTTAGATAAGGC---AGGTCAGGGAGAGCGACATGTACTCATCTTTGATTTGGGTGGA 399011 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 || || |||| || | || | || || |||||| | |||||||||||||| || Sbjct 399010 GGCACATTTGATGTGTCCATCCTGACCATAGATGATGGGATTTTTGAAGTAAAGGCTACA 398951 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGA 451596 ||| || || || ||||| || || || Sbjct 398950 GCTGGGGACACCCACCTAGGTGGAGAGGA 398922 >seq492 Length=52531 Score = 178 bits (196), Expect = 5e-39 Identities = 260/359 (72%), Gaps = 14/359 (4%) Strand=Plus/Plus Query 451227 AAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAA 451286 ||||||| || |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct 17901 AAACTAAGACATTTGCTCCATAAGAAATTTCTGCTATGGTTCTCACTAAAATGAAAGAGA 17960 Query 451287 CAGCAGAACAATATATTGGTTCTCCAGTT-ACTGATGCAGTAATTACTGTTCCCGCTTAT 451345 | || || ||| |||| |||| || ||||||| ||||||| || || ||| Sbjct 17961 CTGCTGAGGCTTAT-TTGGGAAAGAAGTTTACCCATGCAGTTGTTACTGTACCAGCCTAT 18019 Query 451346 TTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTT 451405 || |||||||| || | ||||||||| |||||||| || |||||||| | |||||| Sbjct 18020 TTTAATGATGCCCATCAGCAAGCAACCAAAGATGCTAGAACTATTGCTGTCCTGAATGTT 18079 Query 451406 CTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAA 451465 | | || || ||||| ||||||||||||||| | | ||||| || ||| || | Sbjct 18080 ATGAGGATCATCAATGAGCCTACAGCAGCTGCTATTACTTATGGCCT-GGATAA--GAGG 18136 Query 451466 GAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAAC---TCATGATACT 451522 || | ||| || || || | || |||||| ||||||| ||||| | ||| | || Sbjct 18137 GA---GGGAGAGAAGAACATCCTGGTGTTTGATCTTGGTGGTGGAACCTTTTATG-TGCT 18192 Query 451523 TCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCA 451581 || | || | ||||| |||| || |||||||| | | || ||| ||||||||| Sbjct 18193 TC--TTCTCACCATTGACAATGGTGTCTTTGAAGTCATAGTCACTAATACTGATACTCA 18249 >seq43 Length=18332749 Score = 174 bits (192), Expect = 6e-38 Identities = 290/412 (70%), Gaps = 13/412 (3%) Strand=Plus/Plus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAA 451252 || || |||||||| || || | ||||| ||||||| || |||||||| |||||| Sbjct 9358063 AAACCATATATTCAGGTTGATATTGGAGGTGGGCAAACTAAGACATTTGCTCCAGAAGAA 9358122 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || ||||| |||| |||||||||||||| || ||| | ||| || Sbjct 9358123 ATCTCTGCTATGATTCTCACTAAAATGAAAGAGACTGCAAAGGCTTATTCGGGAAAGAAG 9358182 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| || || ||||| |||||||| || |||||||||| Sbjct 9358183 GTTACCCATGCAGTG-TTACTGTACCAGCCTATTTTAATGATGC-CAGTGGCAAGCAACC 9358240 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||||||| | |||||| | | || || ||||| ||||||||| Sbjct 9358241 AAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCA 9358300 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 |||||| | || ||||| || ||| || | || | ||| || || || | || Sbjct 9358301 GCTGCTATTGCTTATGGCCT-GGATAA--GAGGGA---GGGAGAGAAGAACATCCTGGTG 9358354 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG--AAGATGGGGTAT 451550 |||||| | ||||| ||||| || ||| | || | |||| || || || | Sbjct 9358355 TTTGATCTGGGTGGTGGAACCTTCTATGTGTCTCTTCTCCCCATTGATAATTTGATGTCT 9358414 Query 451551 TTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 | |||| | ||| | |||| | |||||||||| || || ||||| |||| Sbjct 9358415 TCAAAGTCATGGCCAACAATAGAGATACTCATCGGGGTGGAGAAGACTTTGA 9358466 >seq533 Length=44452 Score = 163 bits (180), Expect = 1e-34 Identities = 254/357 (71%), Gaps = 11/357 (3%) Strand=Plus/Plus Query 451227 AAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAA 451286 ||| ||| || |||||||| || ||||||| |||||||||| |||||||||||||| | Sbjct 29534 AAATTAAGACATTTGCTCCATAATAAATTTCTGCTATGGTTCTCACTAAAATGAAAGAGA 29593 Query 451287 CAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATT 451346 | || || ||| |||| |||| ||||||| || |||| || || |||| Sbjct 29594 CTGCTGAGGCTTAT-TTGGAAAGAAGTTTACCCATGCAGTTGTTGCTGTACCAGCCTATT 29652 Query 451347 TCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTC 451406 | |||||||| || | ||||||||| |||||||| || |||||||| | |||||| Sbjct 29653 TTAATGATGCCCAGCAGCAAGCAACCAAAGATGCTAGAACTATTGCTGTCCTGAATGTTA 29712 Query 451407 TTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAG 451466 | | || || ||||| ||||||||||||||| | | ||||| || ||| || | | Sbjct 29713 TGAGGATCATCAATGAGCCTACAGCAGCTGCTATTACTTATGGCCT-GGATAA--GAGGG 29769 Query 451467 AAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATA--CTTC 451524 | | ||| || || || | || |||||| | ||||| |||| ||||| |||| Sbjct 29770 A---GGGAGAGAAGAACATCCTGGTGTTTGATCTGGGTGGTAGAACCTTTGATATGCTTC 29826 Query 451525 TGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCA 451581 | || | ||||| |||| || |||||||| | || || ||| ||||||||| Sbjct 29827 --TTCTCACCATTGACAATGGTGTCTTTGAAGTCATGGTCACTAATACTGATACTCA 29881 >seq1196 Length=7785 Score = 156 bits (172), Expect = 2e-32 Identities = 286/412 (69%), Gaps = 13/412 (3%) Strand=Plus/Minus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAA 451252 || || || ||||| || || | ||||| ||||||| || |||||||| |||||| Sbjct 5138 AAACCATACATTCAGGTTGATATTGGAGGTGGGCAAACTAAGACATTTGCTCCAGAAGAA 5079 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || ||||| |||| |||||||||||||| || || || ||| || Sbjct 5078 ATCTCTGCTATGATTCTCACTAAAATGAAAGAGACTGCGGAGGCTTATTCGGGAAAGAAG 5019 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||| | ||||||| || || ||||| |||| ||| || |||||||||| Sbjct 5018 GTTACCCATGCAATG-TTACTGTGCCAGCCTATTTTAATGCTGC-CAGTGGCAAGCAACC 4961 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||||||| | |||||| | | || || ||||| ||||||||| Sbjct 4960 AAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCA 4901 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 |||||| | || ||||| || ||| || | || | ||| || || || | || Sbjct 4900 GCTGCTATTGCTTATGGCCT-GGATAA--GAGGGA---GGGAGAGAAGAACATCCTGGTG 4847 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG--AAGATGGGGTAT 451550 |||||| ||||| ||||| || ||| | || |||| || || || | Sbjct 4846 TTTGATCCGGGTGGTGGAACCTTCTATGTGTCTCTTCTCCTCATTGACAATTTGATGTCT 4787 Query 451551 TTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 | |||| | ||| |||||| | |||||||||| || || ||||| |||| Sbjct 4786 TCAAAGTCATGGCCACCAATAGAGATACTCATCGGGGTGGAGAAGACTTTGA 4735 >seq25 Length=31340621 Score = 111 bits (122), Expect = 6e-19 Identities = 147/203 (72%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || || || || |||| ||| || || |||||| | || Sbjct 4762909 ATGCAGATTTTTGTAAAAACCCTTACAGGGAAGACTAATACACTCGAGGTTGAACCCTCG 4762850 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | | ||| || || || |||||||||| ||||||||||||||| Sbjct 4762849 GACACTATAGAAAATGTAAAAGCCAAGATCCAGGATAAGGAAG-AATTCCTCCTGATCAG 4762791 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || ||||| ||||||||| | |||||| | || || || Sbjct 4762790 CAAAGACTGATCTTTGCTGGTAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 4762731 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 4762730 ATTCAGAAGGAGTCCACCCTTCA 4762708 Score = 89.7 bits (98), Expect = 2e-12 Identities = 168/245 (69%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 96049 TGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA--G 96106 |||||| | |||||||| || || || || ||||| ||| || | || | || | Sbjct 8174076 TGCAATCTCTGGCACTAAAGGGTCATCTGGGTTTGGATCA--CATAGCAGTGAACAAATG 8174133 Query 96107 GATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAA 96166 |||||||| ||| || ||| |||| || || ||| | | ||| |||||| | | Sbjct 8174134 GATAAAAGAACTGTAGAAATAGTTAAAGCAGGAGACCATTGTGATCTTAGAATATCAAGA 8174193 Query 96167 CAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTA 96226 ||||| || || | ||||||||||||||||||| ||| ||||| || ||| Sbjct 8174194 CAAATGCTGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTGTAAATGCAACCTTA 8174253 Query 96227 GGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCA 96286 || ||||| | || |||||| ||||||| |||| || |||||| ||||| | | Sbjct 8174254 GGTGGCTTGAAGGGGTAGTCTGTAGGAAAATGAATTGTCAAAAAGAATACACCACCTTGA 8174313 Query 96287 TAGGG 96291 || || Sbjct 8174314 TATGG 8174318 >seq91 Length=6382753 Score = 105 bits (116), Expect = 3e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||| | ||||| || | || || ||||||||||| || |||||| | || Sbjct 364402 ATGCAGATTTTCTTAAAAACCCTTATGGGGAAGACTATTACTCTCGAGGTTGAACCCTCC 364343 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 | | || ||| | | ||| || || || ||||||||||||||||||||||||| Sbjct 364342 AACACTATAGAAAATGTAAAAGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGATCAG 364283 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || || | || || ||||| ||||||||| | || ||| | || || | Sbjct 364282 TAAAGTCTCATCTTTGCTGGTAAGCAACTAGAAGATGGACGTACCTTGTCTGACTACGAC 364223 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 364222 ATTTAGAAGGAGTCCACCCTTCA 364200 >seq2 Length=69027483 Score = 104 bits (114), Expect = 9e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 |||||||| ||||| || || | || |||||||| | || |||||| | || |||| Sbjct 23646108 ATTTTCGTAAAAACCCTTACAGAGAAGACTATTACAATGGAGGTTGAACCCTCGGATACT 23646167 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 || ||| | | || || || || |||||||||||||||||||||||||| ||| | Sbjct 23646168 ATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCATCAAAGA 23646227 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 | || || | | || ||||| ||||||||| | || || | || || || ||| | Sbjct 23646228 CTGATGTTTGCTGATAAGCAACTGGAAGATGGACGTACCGTGTCTGACTACAACATTCAG 23646287 Query 391236 AAGGATGCAACACTTCA 391252 ||||| | || ||||| Sbjct 23646288 AAGGAGTCCACCCTTCA 23646304 >seq48 Length=15743623 Score = 96.9 bits (106), Expect = 1e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| || || ||||| |||||||| || ||||||||||| Sbjct 6224221 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTTAATGATGCCCAGCGGCAAGCAACA 6224280 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| ||| ||||||||| | |||||| | | || || ||||| || Sbjct 6224281 AAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCC 6224333 >seq16 Length=44863414 Score = 96.9 bits (106), Expect = 1e-14 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || || | || ||| ||| || || | |||| | || Sbjct 42573940 ATGCAGATTTTCGTAAAAACCCTTACGAGGAAGACTGTTATGCTGGAGGCTGAACCCTCG 42573881 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | | ||| || || || |||||||||||||||||||||||||| Sbjct 42573880 GACACTATAGAAAATGTAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 42573821 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || ||||| ||||||||| | |||||| | || | | Sbjct 42573820 CAAAGACTGATCTTTGCTGGTAAGCAACTGGAAGATGGATGTACTTTGTCTGACCACAGC 42573761 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 42573760 ATTCAGAAGGA 42573750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975350260068644