Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11- 20] 14,543 sequences; 2,510,587,379 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq21 224 8e-53 seq43 145 6e-29 seq492 143 2e-28 seq297 140 3e-27 seq533 134 1e-25 seq85 134 1e-25 seq1196 131 1e-24 seq1256 125 6e-23 seq25 118 9e-21 seq16 107 2e-17 seq91 104 2e-16 seq48 100 2e-15 seq26 98.7 8e-15 seq2 98.7 8e-15 seq138 91.5 1e-12 seq9 87.8 1e-11 seq6433 86.0 5e-11 seq73 86.0 5e-11 seq15 86.0 5e-11 >seq21 Length=35249227 Score = 224 bits (248), Expect = 8e-53 Identities = 420/606 (69%), Gaps = 27/606 (4%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| ||||| || || || || ||||| ||| |||||| || || | || |||| || Sbjct 399602 AGCCATAGGCATCGACTTGGGTACCACCTATTCTTGTGTAGGGGTGTTCCAGCATGGCAA 399543 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || || || ||||||||||| || || ||| | || || || ||||| | ||||| Sbjct 399542 GGTGGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCCCAGCTATGTGGCCTTCAC 399483 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTAC 550167 ||| || |||| | |||| |||||||| ||| | || ||||| || |||||| Sbjct 399482 GGATACAGAACGGCTTATTGGGGATGCAGCCAAAAACCAGGTAGCCA-TG--AATCCTCA 399426 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 || ||| | |||||||| |||||| | ||||| || | ||||||||| | ||| || Sbjct 399425 GAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTTGTGCA 399366 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTA--TATT 550285 | |||||||||| | ||||||||| ||| | | |||| || || || | | | Sbjct 399365 GTCAGATATGAAACTTTGGCCTTTTCAAGTGATCAATGAAGGAGGCAAGCCCAAGGTGCT 399306 Query 550286 GAAGCTACTCATGAAGGATCTGTTAAACAA---TTTTCACCAGAACAAATTTCATCTATG 550342 | | | || || |||| | ||| || || | || ||| ||||||| || ||| Sbjct 399305 GGTG-TCCT-ATAAAGG---GGAGAAAAAAGCTTTCTACCCTGAAGAAATTTCTTCAATG 399251 Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402 || || | || ||||| |||| || |||||| | || || | || |||| Sbjct 399250 GTATTGACTAAGATGAAGGAAACTGCAGAGGCTTTTTTAGGCCACCTGATCACCAATGCT 399191 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462 || || |||||||| || ||||| |||||||| ||||| || || || || ||||| || Sbjct 399190 GTGATCACTGTACCGGCCTATTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGT 399131 Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522 ||||| ||||| ||||| || | || ||||||||||| || |||||||| |||| Sbjct 399130 GTGATTGCAGGACTCAATGTGCTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCG 399071 Query 550523 TATGGACTTGATAA-ACATAATGATCA---AGAACTTAATGTACTCATCTTTGATT---G 550575 ||||| | ||||| || | ||| ||| | |||||||||||||||||| | Sbjct 399070 TATGGCTTAGATAAGGCA----GGTCAGGGAGAGCGACATGTACTCATCTTTGATTTGGG 399015 Query 550576 TGGAGG 550581 |||||| Sbjct 399014 TGGAGG 399009 Score = 127 bits (140), Expect = 2e-23 Identities = 440/681 (65%), Gaps = 8/681 (1%) Strand=Plus/Minus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 || || || || ||||||| | | || ||||| | || ||| ||| | | ||| | Sbjct 398824 ACCGCCTGTGAGCGAGCCAAGAGGACCCTATCATCCAGCACCCAAGCCAATCTGGAAATT 398765 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 |||||| | | ||| || ||||| | | || |||| | || ||| |||||||| Sbjct 398764 GATTCACTTTATGAAGGCATTGACTTCTACACATCTATCACCAGAGCCCGGTTTGAAGAG 398705 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 | ||| | || || ||||| || | ||||| || ||| ||| | | ||||| | Sbjct 398704 CTGTGTGCAGACCTGTTTAGGGGTACCCTGGAACCTGTGGAAAAAGCTCTTCGAGATGCC 398645 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 ||||| ||||| | ||| | ||||| ||||| | || || || || || | || ||| Sbjct 398644 AAGATGGATAAGGCTAAAATCCATGACATTGTTTTAGTAGGGGGCTCCACTCGCATCCCT 398585 Query 552153 AAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAA 552211 || | | || || || || || |||| ||||| | | || | || | || Sbjct 398584 AAGGTGCAGAAACTGCTTCAGGACT-ATTTTAATGGACGTGATCTCAACAAGAGCATCAA 398526 Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG---ACA 552268 ||| |||||||| || |||||||| || ||| | || ||||| ||| || ||| ||| Sbjct 398525 TCCTGATGAGGCAGTAGCCTATGGGGCTGCAGTACAGGCAGCCATT-TTGATGGGTGACA 398467 Query 552269 AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTT 552328 || |||||| |||| || | | | | || || | ||||| ||||| || || Sbjct 398466 AATC--TGAAAAGGTACAGGATCTGCTTTTGTTGGACGTGGCCCCTCTGTCTCTAGGGTT 398409 Query 552329 AGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAA 552388 ||| |||| ||| ||| | |||||| || || | | ||| | || || || ||| Sbjct 398408 AGAGACAGCTGGGGGTGTGATGACTGTGCTGATTAAGCGTAATTCCACCATCCCCACTAA 398349 Query 552389 AAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTT 552448 | | | | || | || ||||||||||| ||| ||| || || || | | Sbjct 398348 GCAGACACAGATCTTCACCACATATTCAGATAACCAACCTGGGGTGCTGATCCAGGTATA 398289 Query 552449 TGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGG 552508 ||| || ||| | | || || || || | ||| || ||| | | || Sbjct 398288 TGAGGGTGAACGGGCTATGACACGTGACAACAACCTACTGGGGCGCTTTGACCTGACTGG 398229 Query 552509 TATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAA 552568 || |||||||| || | ||||| || || ||||| || || || || || |||||||| Sbjct 398228 AATACCTCCTGCACCCAGGGGAGTTCCTCAGATTGAGGTGACCTTTGACATTGATGCCAA 398169 Query 552569 TGGAATTTTGAATGTGACTGC 552589 ||||||| | ||||| || || Sbjct 398168 TGGAATTCTTAATGTCACAGC 398148 >seq43 Length=18332749 Score = 145 bits (160), Expect = 6e-29 Identities = 169/223 (76%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 550315 ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGC 550374 |||| | |||||| |||| || ||||| || | | ||||||||| | || || | || Sbjct 9358107 ATTTGCTCCAGAAGAAATCTCTGCTATGATTCTCACTAAAATGAAAGAGACTGCAAAGGC 9358166 Query 550375 TTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACT 550433 || | | || |||||| |||| ||||||| || |||||||||| ||||||||||| Sbjct 9358167 TTAT-TCGGGAAAGAAGGTTACCCATGCAGTGTTA-CTGTACCAGCCTATTTTAATGATG 9358224 Query 550434 CACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTA 550493 | || | ||||| || |||||||||||| ||||||||| || |||||| | | || | Sbjct 9358225 C-CAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCA 9358283 Query 550494 TCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||||| ||||| || ||||| |||| ||||| || ||||| Sbjct 9358284 TCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCTGGATAA 9358326 >seq492 Length=52531 Score = 143 bits (158), Expect = 2e-28 Identities = 167/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 550315 ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGC 550374 |||| | ||| || ||||||| |||||||| | | ||||||||| | || || || Sbjct 17911 ATTTGCTCCATAAGAAATTTCTGCTATGGTTCTCACTAAAATGAAAGAGACTGCTGAGGC 17970 Query 550375 TTTTGTTGGTCAAGAAGTT-ACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACT 550433 || | |||| |||||||| || ||||||| | ||||||||||| ||||||||||| Sbjct 17971 TTAT-TTGGGAAAGAAGTTTACCCATGCAGTTGTTACTGTACCAGCCTATTTTAATGATG 18029 Query 550434 CACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTA 550493 | || | ||||| || ||||||||| || |||||||| || |||||| | | || | Sbjct 18030 CCCATCAGCAAGCAACCAAAGATGCTAGAACTATTGCTGTCCTGAATGTTATGAGGATCA 18089 Query 550494 TCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||||| ||||| || ||||| || | ||||| || ||||| Sbjct 18090 TCAATGAGCCTACAGCAGCTGCTATTACTTATGGCCTGGATAA 18132 >seq297 Length=157532 Score = 140 bits (154), Expect = 3e-27 Identities = 167/223 (75%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 550315 ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGC 550374 |||| | |||||| |||| || ||||| || | | ||||||||| | | || || Sbjct 508 ATTTGCTCCAGAAGAAATCTCTGCTATGATTCTCACTAAAATGAAAGAGATTGCTGAGGC 449 Query 550375 TTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACT 550433 || | |||| |||||| |||| ||||||| | |||||| |||| ||||||||||| Sbjct 448 TTAT-TTGGGAAAGAAGGTTACCCATGCAGTTGTTACTGTATCAGCCTATTTTAATGATG 390 Query 550434 CACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTA 550493 | || | ||||| || |||||||||||| ||||||||| || |||||| | | || | Sbjct 389 C-CACTGGCAAGCGACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCA 331 Query 550494 TCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||||| ||||| || ||||| |||| ||||| || ||||| Sbjct 330 TCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCTGGATAA 288 >seq533 Length=44452 Score = 134 bits (148), Expect = 1e-25 Identities = 166/223 (74%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 550315 ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGC 550374 |||| | ||| || ||||||| |||||||| | | ||||||||| | || || || Sbjct 29544 ATTTGCTCCATAATAAATTTCTGCTATGGTTCTCACTAAAATGAAAGAGACTGCTGAGGC 29603 Query 550375 TTTTGTTGGTCAAGAAGTT-ACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACT 550433 || | |||| |||||||| || ||||||| | |||||||||| ||||||||||| Sbjct 29604 TTAT-TTGGA-AAGAAGTTTACCCATGCAGTTGTTGCTGTACCAGCCTATTTTAATGATG 29661 Query 550434 CACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTA 550493 | || | ||||| || ||||||||| || |||||||| || |||||| | | || | Sbjct 29662 CCCAGCAGCAAGCAACCAAAGATGCTAGAACTATTGCTGTCCTGAATGTTATGAGGATCA 29721 Query 550494 TCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||||| ||||| || ||||| || | ||||| || ||||| Sbjct 29722 TCAATGAGCCTACAGCAGCTGCTATTACTTATGGCCTGGATAA 29764 >seq85 Length=7583739 Score = 134 bits (148), Expect = 1e-25 Identities = 165/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 550315 ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGC 550374 |||| | |||||| |||| || ||||| || | | ||||||||| | || || || Sbjct 7497531 ATTTGCTCCAGAAGAAATCTCTGCTATGATTCTCACTAAAATGAAAGAGACTGCAGAGGC 7497472 Query 550375 TTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACT 550433 || | ||| |||||| |||| ||||||| | ||||||||||| | ||||||||| Sbjct 7497471 TTAT-TTGTGAAAGAAGGTTACACATGCAGTTGTTACTGTACCAGCCTGTTTTAATGATG 7497413 Query 550434 CACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTA 550493 | || | || || || ||| |||||||| ||||||||| || |||||| | | || | Sbjct 7497412 CCCAGCAGCAGGCAACCAAAAATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCA 7497353 Query 550494 TCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||||| ||||| || ||||| |||| ||||| || ||||| Sbjct 7497352 TCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCTGGATAA 7497310 >seq1196 Length=7785 Score = 131 bits (144), Expect = 1e-24 Identities = 166/223 (74%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 550315 ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGC 550374 |||| | |||||| |||| || ||||| || | | ||||||||| | || || || Sbjct 5094 ATTTGCTCCAGAAGAAATCTCTGCTATGATTCTCACTAAAATGAAAGAGACTGCGGAGGC 5035 Query 550375 TTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACT 550433 || | | || |||||| |||| ||||| | || |||| ||||| |||||||||| || Sbjct 5034 TTAT-TCGGGAAAGAAGGTTACCCATGCAATGTTA-CTGTGCCAGCCTATTTTAATG-CT 4978 Query 550434 CACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTA 550493 || | ||||| || |||||||||||| ||||||||| || |||||| | | || | Sbjct 4977 GCCAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCA 4918 Query 550494 TCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||||| ||||| || ||||| |||| ||||| || ||||| Sbjct 4917 TCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCTGGATAA 4875 >seq1256 Length=7333 Score = 125 bits (138), Expect = 6e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||||| ||||| || || ||||||| | || |||| || || || Sbjct 1174 GGTATTGATTTGGGAACAACTTACTCGTGTGTTGCTCATTTTTCCAATGATAGGGTAGAG 1233 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||| |||||||||||||| || || |||||||| ||||| ||||||| || || Sbjct 1234 ATAATTGCAAATGATCAAGGTAATAGGACCACTCCATCGTATGTGGCTTTCACAGACACC 1293 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 ||| ||| ||||||| || || ||| ||||||| | |||||| ||||| || Sbjct 1294 GAAAGATTAATTGGTGACGCCGCCAAAAATCAAGCTGCAATCAATCCTCATAATACAGTT 1353 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGAT 550216 |||||||| || || |||||||| | | ||| ||||| Sbjct 1354 TTTGATGCAAAGCGGTTAATTGGTCGTAAATTTGATGAT 1392 >seq25 Length=31340621 Score = 118 bits (130), Expect = 9e-21 Identities = 154/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || |||||||||||||| || || ||| ||||| |||| | ||| | | |||| Sbjct 4762699 AGCACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATCT 4762758 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || ||||| || || ||||| || |||||||||||||||||||||||| |||| ||||| Sbjct 4762759 TCCAGTTGCTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATT-CTTCCTTATCC 4762817 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTT 563442 || || || |||||| || || || || | | | | ||||| ||| ||| Sbjct 4762818 TGGATCTTGGCTTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGTGTATTAGTC 4762877 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || ||||| ||||| || ||||| ||||| Sbjct 4762878 TTCCCTGTAAGGGTTTTTACAAAAATCTGCAT 4762909 >seq16 Length=44863414 Score = 107 bits (118), Expect = 2e-17 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 563268 AAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAG 563327 ||||||| |||| || || ||| ||| |||| | ||| | | |||||| || Sbjct 42573734 AAGATGAGGGGTGGACTCCTTCTGAATGCTGTGGTCAGACAAAGTACATCCATCTTCCAG 42573793 Query 563328 TTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAAT 563387 ||| || || ||||| || ||||||||||||||||||||||||||||| ||||| || || Sbjct 42573794 TTGCTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGAT 42573853 Query 563388 TTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACC 563447 || |||||| || || || || | | | | || || ||||||| || | Sbjct 42573854 CTTGGCTTTTACATTTTCTATAGTGTCCGAGGGTTCAGCCTCCAGCATAACAGTCTTCCT 42573913 Query 563448 AGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| ||||| |||||||| ||||| Sbjct 42573914 CGTAAGGGTTTTTACGAAAATCTGCAT 42573940 >seq91 Length=6382753 Score = 104 bits (114), Expect = 2e-16 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || |||||||||||||| || || ||| | ||| |||| | || | | |||| Sbjct 364191 AGAACAAGATGAAGGGTGGACTCCTTCTAAATGTCGTAGTCAGACAAGGTACGTCCATCT 364250 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || ||||| || || ||||| || || |||| ||||||||||||||||||||| |||| Sbjct 364251 TCTAGTTGCTTACCAGCAAAGATGAGACTTTACTGATCAGGAGGAATTCCTTCCTTATTC 364310 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTT 563442 || || || |||||| || || || | | | | | |||||||||| ||| Sbjct 364311 TGGATCTTGGCTTTTACATTTTCTATAGTGTTGGAGGGTTCAACCTCGAGAGTAATAGTC 364370 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || |||| ||||| | |||||| ||||| Sbjct 364371 TTCCCCATAAGGGTTTTTAAGAAAATCTGCAT 364402 >seq48 Length=15743623 Score = 100 bits (110), Expect = 2e-15 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||||||||| ||||||||||| | || || ||||| || Sbjct 6224221 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTTAATGATGCCCAGCGGCAAGCAACA 6224280 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 |||||||||||| ||||||||| || |||||| | | || |||||||| || Sbjct 6224281 AAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCC 6224333 >seq26 Length=30937789 Score = 98.7 bits (108), Expect = 8e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | || || ||||| || || ||||| || || ||||| || || Sbjct 1575419 GTTACCAATGCTGTGGTCACAGTGCCAGCTTACTTCAATGATTCTCAGCGTCAGGCAACC 1575478 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||| ||| |||||||| || ||||| ||| | || |||||||| || |||||| Sbjct 1575479 AAAGATGCCGGAACCATTGCTGGTCTCAATGTACTTAGGATAATCAATGAGCCAACTGCT 1575538 Query 550511 GCTGCACTTGCATATGG 550527 ||||| | || ||||| Sbjct 1575539 GCTGCTATCGCTTATGG 1575555 Score = 93.3 bits (102), Expect = 3e-13 Identities = 231/347 (67%), Gaps = 4/347 (1%) Strand=Plus/Plus Query 551894 AGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTAC 551953 |||| | || ||||| | ||||| || |||||||| || || | || || || | || Sbjct 1575873 AGCTGTCCGACGTCTCCGTACTGCATGTGAAAGAGCTAAGCGTACCCTCTCTTCCAGCAC 1575932 Query 551954 TCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTC 552013 ||| ||| |||||| | ||||| | | ||| ||||| || | |||| | ||| | Sbjct 1575933 TCAGGCCAGTATTGAGATTGATTCTCTCTATGAAGGAATCGACTTCTATACCTCCATTAC 1575992 Query 552014 GAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGA 552073 | || ||||||||| | | |||| || || | || | || || ||||| Sbjct 1575993 CCGTGCTCGATTTGAAGAGTTGAATGCTGACCTGTTCCGTGGCACCCTCGACCCTGTAGA 1576052 Query 552074 ACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGG 552133 | ||| | | ||||| | || | || || || | | ||||| ||||| || || || Sbjct 1576053 AAAAGCTCTTCGAGATGCCAAACTAGACAAGTCACAGATCCATGATATTGTACTGGTGGG 1576112 Query 552134 TGGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAA 552191 ||| ||||| | || || || |||| ||| | | || ||| || |||||| || Sbjct 1576113 TGGTTCTACTCGCATCCCCAAGATTCA-GAAGCTTCTGCAGGACTTCTT-CAATGGAAAG 1576170 Query 552192 AAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGC 552238 || | ||| | || | || || |||||||||||||| |||||||| Sbjct 1576171 GAACTGAATAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGC 1576217 Score = 86.0 bits (94), Expect = 5e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || |||||| ||||| | || |||| ||||| || Sbjct 1574530 GGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGGAAAAGTGGAG 1574589 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| ||||||| ||| ||||| | || || || || Sbjct 1574590 ATAATTGCCAATGATCAGGGGAACCGAACTACCCCAAGCTATGTCGCCTTTACTGACACA 1574649 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA 550149 |||| || | || ||||| ||||| |||| Sbjct 1574650 GAACGATTGATCGGCGATGCTGCAAAGAATCA 1574681 >seq2 Length=69027483 Score = 98.7 bits (108), Expect = 8e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 563270 GATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTT 563329 |||||||||| || || ||| ||||| |||| | || | | |||||| |||| Sbjct 23646306 GATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACACGGTACGTCCATCTTCCAGTT 23646247 Query 563330 GTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTT 563389 | || | ||||| || |||||||| |||||||||||||||||||| ||||| || || | Sbjct 23646246 GCTTATCAGCAAACATCAGTCTTTGATGATCAGGAGGAATTCCTTCCTTATCCTGGATCT 23646187 Query 563390 TTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAG 563449 | ||||| || || ||||| | | | | || | |||| ||| || | | Sbjct 23646186 TGGCCTTTACATTTTCTATAGTATCCGAGGGTTCAACCTCCATTGTAATAGTCTTCTCTG 23646127 Query 563450 TAAGAGTTTTAACGAAAATTTGCA 563473 |||| ||||| |||||||| |||| Sbjct 23646126 TAAGGGTTTTTACGAAAATCTGCA 23646103 >seq138 Length=1287892 Score = 91.5 bits (100), Expect = 1e-12 Identities = 158/225 (70%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||||| || || || || ||||| ||| | | ||| ||||||||||||| ||| Sbjct 343405 CCTCAGACGAAGGACCAGGTGCAGGGTGGACTCTTTCTGG--ATATTGTAATCAGAAAGA 343462 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| | || || || ||||| || || || ||||| ||||| ||||| Sbjct 343463 GTACGGCCATCTTCCAACTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATG 343522 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||||||||| || || || || || |||||| || ||| || | | || || Sbjct 343523 CCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTG-GGCTCCACCTC 343581 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | || || ||||| || || || || || || ||||| Sbjct 343582 CAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 343626 >seq9 Length=54061371 Score = 87.8 bits (96), Expect = 1e-11 Identities = 157/225 (70%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||| | || || || || ||||| ||| | | ||| || ||||| |||| ||| Sbjct 30845446 CCTCAGAGGAAGGACCAGGTGCAGGGTGGACTCTTTCTGG--ATGTTGTAGTCAGAAAGA 30845389 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || | || || ||||| || || || ||||| ||||||||||| Sbjct 30845388 GTGCGGCCATCTTCCAGCAGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 30845329 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TC 563429 ||||||||||| || || || || || |||||| || ||| || | | ||| || Sbjct 30845328 CCTTCTTTATCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCACTGAG-CTCCATCTC 30845270 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | ||| || ||||| || || || | || || ||||| Sbjct 30845269 CAGGGTGATAGTCTTGCCAGTCAGGGTCTTCATAAAGATCTGCAT 30845225 >seq6433 Length=3029 Score = 86.0 bits (94), Expect = 5e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || |||||| ||||| | || |||| ||||| || Sbjct 2688 GGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGGAAAAGTGGAG 2747 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| ||||||| ||| ||||| | || || || || Sbjct 2748 ATAATTGCCAATGATCAGGGGAACCGAACTACCCCAAGCTATGTCGCCTTTACTGACACA 2807 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA 550149 |||| || | || ||||| ||||| |||| Sbjct 2808 GAACGATTGATCGGCGATGCTGCAAAGAATCA 2839 >seq73 Length=8991979 Score = 86.0 bits (94), Expect = 5e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 720789 TCCATCCCTTCCTGCACGACCAATTTCTTGATAATATCCTTCAATATTTTTAGGTGCACC 720848 |||||| | || || | ||||||||| ||||||||| ||| || | |||||| ||||| Sbjct 1138631 TCCATCACGGCCAGCTCTACCAATTTCCTGATAATATGATTCCATTTCTTTAGGAGCACC 1138572 Query 720849 ATAATGTATAACTGCTCTCACATCACTTTTATTTATTCCCATTCCAAAAGCAATCGTCGC 720908 |||||| || ||| | | ||| |||||| || |||||||||||||| || || || Sbjct 1138571 ATAATGAATGACTCTGCGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATAGTAGC 1138512 >seq15 Length=47608596 Score = 86.0 bits (94), Expect = 5e-11 Identities = 170/250 (68%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 550004 GATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATT 550063 ||| | || ||||| ||| |||||| | ||| | || |||| ||||| || || | | Sbjct 3850482 GATCTTGGCACCACCTATTTTTGTGTGGCTGTCTTCCAGCATGGAAAAGTGGAGATAACT 3850423 Query 550064 GCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACAT 550123 | ||||| ||| || | | |||||| ||| | ||| | ||||| || | ||| Sbjct 3850422 GTCAATGGTCAGGGGAGCCAAACTACCCCAAGCTGTGTCGCCTTCACTGACCCAGAAGGA 3850363 Query 550124 TTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACTATTTTTG 550181 || || ||||||| ||||| |||| | || || || || | ||||| |||||| Sbjct 3850362 TTGGTCAGTGATGCTGCAAAGAATCAGGTTGCAATG--AACCCCATCAATATGGTTTTTG 3850305 Query 550182 ATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGC 550241 |||| |||||| | | ||| | || | | | ||| | ||| || | |||||||||| Sbjct 3850304 ATGCCAAACGTCTGGTAGGATGGAGATCTGACGATGCTGTTGTCCATTCTGATATGAAGC 3850245 Query 550242 ATTGGCCTTT 550251 | ||||| || Sbjct 3850244 ACTGGCCCTT 3850235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028526900571070