Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11- 20] 14,543 sequences; 2,510,587,379 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq21 183 2e-40 seq1256 172 4e-37 seq492 141 6e-28 seq43 140 2e-27 seq533 132 3e-25 seq297 132 3e-25 seq16 105 4e-17 seq2 102 5e-16 seq26 98.7 6e-15 seq25 98.7 6e-15 seq91 96.9 2e-14 seq6433 95.1 8e-14 seq48 93.3 3e-13 seq1035 91.5 1e-12 seq73 89.7 3e-12 >seq21 Length=35249227 Score = 183 bits (202), Expect = 2e-40 Identities = 374/551 (68%), Gaps = 10/551 (2%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || || || || || || || || || || |||||||| || | || |||| || Sbjct 399601 GCCATAGGCATCGACTTGGGTACCACCTATTCTTGTGTAGGGGTGTTCCAGCATGGCAAG 399542 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || |||||||||||||| || || | || || || ||||| | || || Sbjct 399541 GTGGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCCCAGCTATGTGGCCTTCACG 399482 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || |||| |||||||| ||||| || ||| | || | || |||||| || Sbjct 399481 GATACAGAACGGCTTATTGGGGATGCAGCCAAAAACCAGGTAGCCATGAATCCTCAGAAC 399422 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 ||| | |||||||| ||| | ||||||| | || ||| ||||| | ||| || || Sbjct 399421 ACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTTGTGCAGTCA 399362 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG-- 474626 |||||| | |||||||||| | ||||| |||| || || || || | | | Sbjct 399361 GATATGAAACTTTGGCCTTTTCAAGTGATCAATGAAGGAGGCAAGCCCAAGGTGCTGGTG 399302 Query 474627 --CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTT 474684 | ||| | | || |||| ||| || | || ||| |||||||||||||||| || Sbjct 399301 TCCTATAAAGG--GGAGAAA--AAAGCTTTCTACCCTGAAGAAATTTCTTCAATGGTATT 399246 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 | || ||||| |||| || ||| | | | | || || | || |||| || | Sbjct 399245 GACTAAGATGAAGGAAACTGCAGAG-GCTTTTTTAGGCCACCTGATCACCAATGCTGTGA 399187 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | ||||| || || ||||| ||||| |||||||| || || || || ||||| || | Sbjct 399186 TCACTGTACCGGCCTATTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGTGTGA 399127 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 ||||||| || ||||| || | || || |||||||| ||||| || || |||| |||| Sbjct 399126 TTGCAGGACTCAATGTGCTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCGTATG 399067 Query 474864 GTCTTGATAAG 474874 | | |||||| Sbjct 399066 GCTTAGATAAG 399056 Score = 152 bits (168), Expect = 3e-31 Identities = 546/841 (65%), Gaps = 16/841 (2%) Strand=Plus/Minus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 || ||||| |||| |||| || |||||||| || | || || ||||| || || Sbjct 398980 GATGATGGGATTTTTGAAGTAAAGGCTACAGCTGGGGACACCCACCTAGGTGGAGAGGAC 398921 Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAA---AATAAAG 475454 || || || || ||||| | || | ||| || || ||||| |||||| || |||| Sbjct 398920 TTCGACAACAGGCTTGTGAACCAC--TTTGTAGAGGAGTTCAAAAGGAAACACAAGAAAG 398863 Query 475455 TTGATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTA 475514 | ||| || | || | || | || ||| | | || || ||||| || || | Sbjct 398862 AT-ATCAGCCAGAACAAGCGA--GCTGTGAGGCGTTTGCGTACCGCCTGTGAGCGAGCCA 398806 Query 475515 AGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAA 475574 || | | || || || || ||| | | | | ||| ||||||| |||| |||||| | Sbjct 398805 AGAGGACCCTATCATCCAGCACCCAAGCCAATCTGGAAATTGATTCACTTTATGAAGGCA 398746 Query 475575 TTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTA 475634 |||| | | || ||| || || || |||||||| | ||| | || || |||| Sbjct 398745 TTGACTTCTACACATCTATCACCAGAGCCCGGTTTGAAGAGCTGTGTGCAGACCTGTTTA 398686 Query 475635 GAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAG 475694 | || | ||||| || ||| ||| ||| ||||| | || | || || | || Sbjct 398685 GGGGTACCCTGGAACCTGTGGAAAAAGCTCTTCGAGATGCCAAGATGGATAAGGCTAAAA 398626 Query 475695 TCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAA-TGCTT 475753 ||||||| |||||| | ||||| || || || | || || || | ||||| ||||| Sbjct 398625 TCCATGACATTGTTTTAGTAGGGGGCTCCACTCGCATCCCTAAGGTGC-AGAAACTGCTT 398567 Query 475754 TCATCA-TATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGC 475812 || | ||||||||||| | | || | || | ||||||||||| || || || Sbjct 398566 -CAGGACTATTTTAATGGACGTGATCTCAACAAGAGCATCAATCCTGATGAGGCAGTAGC 398508 Query 475813 ATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAA 475872 ||||| ||||| || || ||||| ||||| ||| | | || || || | | Sbjct 398507 CTATGGGGCTGCAGTACAGGCAGCCATTTTGATGGGTGACAAATCTGAAAAGGTACAGGA 398448 Query 475873 TATTGTACTTGTT-GACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931 | || ||||| ||||| | || || || |||| | || |||| ||| || | | Sbjct 398447 T-CTGCTTTTGTTGGACGTGGCCCCTCTGTCTCTAGGGTTAGAGACAGCTGGGGGTGTGA 398389 Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991 ||||| || ||| | | ||| | | ||||| || | || | | || ||| Sbjct 398388 TGACTGTGCTGATTAAGCGTAATTCCACCATCCCCACTAAGCAGACACAGATCTTCACCA 398329 Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051 | ||||| ||||| ||| | || ||||| | | ||| |||||| | | | Sbjct 398328 CATATTCAGATAACCAACCTGGGGTGCTGATCCAGGTATATGAGGGTGAACGGGCTATGA 398269 Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111 | || || ||| ||| || ||| | || || || |||||||| ||||| | Sbjct 398268 CACGTGACAACAACCTACTGGGGCGCTTTGACCTGACTGGAATACCTCCTGCACCCAGGG 398209 Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTG 476171 |||||||||| ||||| || || ||||| |||||||| ||||| ||||||||||| || | Sbjct 398208 GAGTTCCTCAGATTGAGGTGACCTTTGACATTGATGCCAATGGAATTCTTAATGTCACAG 398149 Query 476172 C 476172 | Sbjct 398148 C 398148 >seq1256 Length=7333 Score = 172 bits (190), Expect = 4e-37 Identities = 182/239 (76%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 474315 AAATGTCCAGAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTT 474374 ||||||| ||| ||| ||||||||||||| ||||| |||||| ||||| ||| || Sbjct 1157 AAATGTCTAGA---GCAGTTGGTATTGATTTGGGAACAACTTACTCGTGTGTTGCTCATT 1213 Query 474375 GGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCAT 474434 |||| || ||||| |||||||| ||||| ||||||||||| || || ||||| | Sbjct 1214 TTTCCAATGATAGGGTAGAGATAATTGCAAATGATCAAGGTAATAGGACCACTCCATCGT 1273 Query 474435 ATGTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCAT 474494 |||| |||| || || || ||| | ||||| || || || ||| ||||||||||| Sbjct 1274 ATGTGGCTTTCACAGACACCGAAAGATTAATTGGTGACGCCGCCAAAAATCAAGCTGCAA 1333 Query 474495 CTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGAT 474553 |||||| |||||| |||||||||| || | || ||||||||||| ||||||||| Sbjct 1334 TCAATCCTCATAATACAGTTTTTGATGCAAAGCGGTTAATTGGTCGTAAATTTGATGAT 1392 >seq492 Length=52531 Score = 141 bits (156), Expect = 6e-28 Identities = 176/236 (75%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 474642 AAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAA 474701 ||||||| |||| | || || |||||||| | |||||| | | ||||||||| | | Sbjct 17901 AAACTAAGACATTTGCTCCATAAGAAATTTCTGCTATGGTTCTCACTAAAATGAAAGAGA 17960 Query 474702 CCGC-GAGCTCATATCTTGGACAAGAAGTA-ACTGATGCAGTAATTACTGTTCCAGCATA 474759 | || ||| | ||| | ||| ||||||| || ||||||| ||||||| ||||| || Sbjct 17961 CTGCTGAGG-CTTATTTGGGA-AAGAAGTTTACCCATGCAGTTGTTACTGTACCAGCCTA 18018 Query 474760 TTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGT 474819 |||||||||| | || | |||||||| |||||||| ||| ||||| | || ||||| Sbjct 18019 TTTTAATGATGCCCATCAGCAAGCAACCAAAGATGCTAGAACTATTGCTGTCCTGAATGT 18078 Query 474820 TTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 | | | || || ||||| || |||||||| || || ||||||| || ||||||| Sbjct 18079 TATGAGGATCATCAATGAGCCTACAGCAGCTGCTATTACTTATGGCCTGGATAAGA 18134 Score = 95.1 bits (104), Expect = 8e-14 Identities = 250/375 (67%), Gaps = 14/375 (4%) Strand=Plus/Plus Query 475791 TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTC 475850 |||| || ||||| |||| || |||||| || ||||||| || | | | | || | Sbjct 18649 TAAACCCAGATGAGGCTGATGTATATGGTGCCACTGTCCAGGCTGGTGTACTCTCCATTG 18708 Query 475851 AATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTC 475910 | ||| ||| || | | | | ||||| |||| ||| ||| || || | | | Sbjct 18709 A-TCA----AGATAC-AGGTGACCTAGTACTGTTTGAAGTATGTCCCCTGACACTTGATA 18762 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCA 475970 ||||||| || ||||| | ||||| || || || || |||| | | || || Sbjct 18763 TTGAAACTGTGGGAGGTGTCATGACCAAGCTGATACCAAGGAATAATGTGGTACCCACCA 18822 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 | || || | | ||||| || ||||||||||||| | ||||| | ||| | ||| Sbjct 18823 AGAAGTCTCAGATCTTTTCTACACCTTCTGATAATCAACCTACTGTTCCAATCAAGGTCT 18882 Query 476031 TTGAAGGTGAAAGAAAATTCACTAAAGATA-ATAACAAACTTG---GAACTTTTAATCTT 476086 ||||||| ||| || | || || | | | | | | ||| | || ||| |||| Sbjct 18883 ATGAAGGT-AAATAAC---CCCTGAAAAAAGACACCCATCTTCTGAGTACATTTTATCTC 18938 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 || ||||||||||||||| || || ||||| |||||| | |||||||| || ||| Sbjct 18939 ACTGGAATTCCTCCTGCTCCCCAGGGGGTCCCTCAGATTGAATTCACTTTTGAGATAGAT 18998 Query 476147 GCAAATGGTATTCTT 476161 | |||||||||||| Sbjct 18999 GTGAATGGTATTCTT 19013 >seq43 Length=18332749 Score = 140 bits (154), Expect = 2e-27 Identities = 175/235 (74%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 474642 AAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAA 474701 ||||||| |||| | || ||| |||| ||| | ||| || | | ||||||||| | | Sbjct 9358097 AAACTAAGACATTTGCTCCAGAAGAAATCTCTGCTATGATTCTCACTAAAATGAAAGAGA 9358156 Query 474702 CCGCGAGCTCATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATAT 474760 | || | | ||| ||| |||||| | || ||||||| ||||||| ||||| ||| Sbjct 9358157 CTGCAAAGGCTTATTCGGGA-AAGAAGGTTACCCATGCAGTG-TTACTGTACCAGCCTAT 9358214 Query 474761 TTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTT 474820 ||||||||| | || | |||||||| |||||||| |||| ||||| || || |||||| Sbjct 9358215 TTTAATGATGC-CAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTT 9358273 Query 474821 TTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 | | || || ||||| || |||||||| || |||||||||| || ||||||| Sbjct 9358274 ATGAGGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCTGGATAAGA 9358328 >seq533 Length=44452 Score = 132 bits (146), Expect = 3e-25 Identities = 169/226 (75%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 474652 ATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCT 474710 |||| | || || |||||||| | |||||| | | ||||||||| | || || ||| Sbjct 29544 ATTTGCTCCATAATAAATTTCTGCTATGGTTCTCACTAAAATGAAAGAGACTGCTGAGG- 29602 Query 474711 CATATCTTGGACAAGAAGTA-ACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGAT 474769 | ||| ||||| ||||||| || ||||||| || |||| ||||| |||||||||||| Sbjct 29603 CTTAT-TTGGA-AAGAAGTTTACCCATGCAGTTGTTGCTGTACCAGCCTATTTTAATGAT 29660 Query 474770 TCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATT 474829 | || | |||||||| |||||||| ||| ||||| | || |||||| | | || Sbjct 29661 GCCCAGCAGCAAGCAACCAAAGATGCTAGAACTATTGCTGTCCTGAATGTTATGAGGATC 29720 Query 474830 ATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 || ||||| || |||||||| || || ||||||| || ||||||| Sbjct 29721 ATCAATGAGCCTACAGCAGCTGCTATTACTTATGGCCTGGATAAGA 29766 Score = 104 bits (114), Expect = 2e-16 Identities = 251/373 (67%), Gaps = 9/373 (2%) Strand=Plus/Plus Query 475791 TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTC 475850 |||| || ||||| |||| || |||||| || ||||||| || | | | | || || Sbjct 30280 TAAACCCAGATGAGGCTGATGTATATGGTGCCACTGTCCAGGCTGGTGTACTCTCCAGTG 30339 Query 475851 AATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTC 475910 | ||| ||| || | | | | ||||| |||| ||| ||| || || | ||| Sbjct 30340 A-TCA----AGATAC-AGGTGACCTAGTACTGTTTGAAGTATGTCCCCTGACACTTGGTA 30393 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCA 475970 ||||||| || ||||| | ||||| || || || || |||| | | || || Sbjct 30394 TTGAAACTGTGGGAGGTGTCATGACCAAGCTGATACCAAGGAATAATGTGGTACCCACCA 30453 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 | || || | | ||||| || ||||||||||||| | ||| | | || | ||| Sbjct 30454 AGAAGTCTCAGATCTTTTCTACAGCTTCTGATAATCAACCTACTATTCCAGTCAAGGTCT 30513 Query 476031 TTGAAGGTGAAAGAAAATTCACTAAAGATAATA-ACAAACTTGGAACTTTTAATCTTGAA 476089 ||||| | || | | || ||||| | || || | ||||||||||| Sbjct 30514 ATGAAGATAAATAACCCCTGACAAAAGACACCCCACCTTCTGAGTACTTTTAATCTCACT 30573 Query 476090 GGTATTCCTCCTGCTCC-CAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGC 476148 || |||||||||||||| ||| || || ||||| |||||||| |||||||| || |||| Sbjct 30574 GGAATTCCTCCTGCTCCACAG-GGGGTCCCTCAGATTGAAGTCACTTTTGAGATAGATGT 30632 Query 476149 AAATGGTATTCTT 476161 |||||||||||| Sbjct 30633 GAATGGTATTCTT 30645 >seq297 Length=157532 Score = 132 bits (146), Expect = 3e-25 Identities = 175/236 (74%), Gaps = 5/236 (2%) Strand=Plus/Minus Query 474642 AAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAA 474701 ||||||| |||| | || ||| |||| ||| | ||| || | | ||||||||| | | Sbjct 518 AAACTAAGACATTTGCTCCAGAAGAAATCTCTGCTATGATTCTCACTAAAATGAAAGAGA 459 Query 474702 CCGC-GAGCTCATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATA 474759 || ||| | ||| | ||| |||||| | || ||||||| ||||||| |||| || Sbjct 458 TTGCTGAGG-CTTATTTGGGA-AAGAAGGTTACCCATGCAGTTGTTACTGTATCAGCCTA 401 Query 474760 TTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGT 474819 |||||||||| | || | ||||| || |||||||| |||| ||||| || || ||||| Sbjct 400 TTTTAATGATGC-CACTGGCAAGCGACCAAAGATGCTGGAACTATTGCTGGCCTGAATGT 342 Query 474820 TTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 | | | || || ||||| || |||||||| || |||||||||| || ||||||| Sbjct 341 TATGAGGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCTGGATAAGA 286 >seq16 Length=44863414 Score = 105 bits (116), Expect = 4e-17 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || || | ||| ||||||||||||||||||||||| Sbjct 42573785 ATCTTCCAGTTGCTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 42573844 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 || || ||||| ||| ||| ||| ||||| || | | || || || || ||| Sbjct 42573845 ATCCTGGATCTTGGCTTTTACATTTTCTATAGTGTCCGAGGGTTCAGCCTCCAGCATAAC 42573904 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || | || || || || |||||||| || Sbjct 42573905 AGTCTTCCTCGTAAGGGTTTTTACGAAAATCTG 42573937 >seq2 Length=69027483 Score = 102 bits (112), Expect = 5e-16 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| ||||||| || || | ||| ||||||||||||||||||||||| Sbjct 23646257 ATCTTCCAGTTGCTTATCAGCAAACATCAGTCTTTGATGATCAGGAGGAATTCCTTCCTT 23646198 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 || || ||||| || ||| ||| |||||||| | | || | || | ||||| Sbjct 23646197 ATCCTGGATCTTGGCCTTTACATTTTCTATAGTATCCGAGGGTTCAACCTCCATTGTAAT 23646138 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTGGAACGA 480775 ||| || | || || || || |||||||| || | ||| Sbjct 23646137 AGTCTTCTCTGTAAGGGTTTTTACGAAAATCTGCAGCGA 23646099 >seq26 Length=30937789 Score = 98.7 bits (108), Expect = 6e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | || || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct 1575426 ATGCTGTGGTCACAGTGCCAGCTTACTTCAATGATTCTCAGCGTCAGGCAACCAAAGATG 1575485 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | |||| ||||| ||||| ||||| | | || || ||||| ||||| || || || Sbjct 1575486 CCGGAACCATTGCTGGTCTCAATGTACTTAGGATAATCAATGAGCCAACTGCTGCTGCTA 1575545 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 | ||||||||| | || || || Sbjct 1575546 TCGCTTATGGTTTGGACAAAAA 1575567 Score = 95.1 bits (104), Expect = 8e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| |||||| | ||| | || |||| || Sbjct 1574523 TGCAGTTGGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGGAAA 1574582 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| || |||||||||||||| || || || |||| || ||| ||||| | ||||| Sbjct 1574583 AGTGGAGATAATTGCCAATGATCAGGGGAACCGAACTACCCCAAGCTATGTCGCCTTTAC 1574642 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC 474492 ||| || |||| | || || |||||||| || |||| | ||| Sbjct 1574643 TGACACAGAACGATTGATCGGCGATGCTGCAAAGAATCAGGTTGC 1574687 Score = 91.5 bits (100), Expect = 1e-12 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110 || || ||||| ||| ||||| | ||| | || ||| || || ||||| ||| | Sbjct 1576884 ACCAAGGATAACAACCTGCTTGGCAAGTTTGAACTCACAGGCATACCCCCTGCACCCCGT 1576943 Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170 || |||||||| |||||||| || |||||||||||||| ||||| || || |||||| || Sbjct 1576944 GGTGTTCCTCAGATTGAAGTCACATTTGATATTGATGCCAATGGCATCCTGAATGTTTCT 1577003 Query 476171 GCT 476173 ||| Sbjct 1577004 GCT 1577006 >seq25 Length=31340621 Score = 98.7 bits (108), Expect = 6e-15 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 480561 AGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCT 480620 || ||||||||||| || || || || || || |||| | ||| | |||| Sbjct 4762699 AGCACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATCT 4762758 Query 480621 TCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCT 480680 || |||||||| |||||||| || || | ||| ||||||||||||||| ||||||| || Sbjct 4762759 TCCAGTTGCTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATT-CTTCCTTATCC 4762817 Query 480681 TGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTT 480740 || ||||| ||| ||| ||| ||||| || | | || | || || ||| |||| Sbjct 4762818 TGGATCTTGGCTTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGTGTATTAGTC 4762877 Query 480741 TTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || || ||||| || Sbjct 4762878 TTCCCTGTAAGGGTTTTTACAAAAATCTG 4762906 >seq91 Length=6382753 Score = 96.9 bits (106), Expect = 2e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || |||| || ||||||||||||||||||||||| Sbjct 364247 ATCTTCTAGTTGCTTACCAGCAAAGATGAGACTTTACTGATCAGGAGGAATTCCTTCCTT 364306 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 | || ||||| ||| ||| ||| ||||| | | | || | || || ||||| Sbjct 364307 ATTCTGGATCTTGGCTTTTACATTTTCTATAGTGTTGGAGGGTTCAACCTCGAGAGTAAT 364366 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || | || || || | |||||| || Sbjct 364367 AGTCTTCCCCATAAGGGTTTTTAAGAAAATCTG 364399 >seq6433 Length=3029 Score = 95.1 bits (104), Expect = 8e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| |||||| | ||| | || |||| || Sbjct 2681 TGCAGTTGGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGGAAA 2740 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| || |||||||||||||| || || || |||| || ||| ||||| | ||||| Sbjct 2741 AGTGGAGATAATTGCCAATGATCAGGGGAACCGAACTACCCCAAGCTATGTCGCCTTTAC 2800 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC 474492 ||| || |||| | || || |||||||| || |||| | ||| Sbjct 2801 TGACACAGAACGATTGATCGGCGATGCTGCAAAGAATCAGGTTGC 2845 >seq48 Length=15743623 Score = 93.3 bits (102), Expect = 3e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 ||||||| ||||||| ||||| |||||||||||| | || || |||||||| ||||||| Sbjct 6224228 ATGCAGTTGTTACTGTACCAGCCTATTTTAATGATGCCCAGCGGCAAGCAACAAAAGATG 6224287 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840 | |||| ||||| || || |||||| | | || || ||||| || Sbjct 6224288 CTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCC 6224333 >seq1035 Length=9571 Score = 91.5 bits (100), Expect = 1e-12 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| | |||||| |||||||| || | | |||||| ||||| || || ||||||||| Sbjct 10 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 69 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||| ||||| |||||| ||||| || |||| | | || || ||| || || Sbjct 70 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAA-AGTGAT 128 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAA 480763 || ||||| || | |||||||||||| Sbjct 129 GGTCTTACCAGTCAAAGTCTTAACGAA 155 >seq73 Length=8991979 Score = 89.7 bits (98), Expect = 3e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 627769 CCATCACGTCCTGCTCTACCTATTTCTTGATAATAACCTTCGATATTTTTAGGTGCGCCA 627828 |||||||| || |||||||| ||||| |||||||| ||| || | |||||| || ||| Sbjct 1138630 CCATCACGGCCAGCTCTACCAATTTCCTGATAATATGATTCCATTTCTTTAGGAGCACCA 1138571 Query 627829 TAATGTATTACTGCTCTCACATCTGATTTATTAATACCCATTCCAAATGCAATTGTTGC 627887 ||||| || ||| | | || | ||||||||| ||||||||||| || || || || Sbjct 1138570 TAATGAATGACTCTGCGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATAGTAGC 1138512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267555380167364