Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11- 20] 14,543 sequences; 2,510,587,379 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq57 170 2e-36 seq37 167 3e-35 seq86 161 1e-33 seq8 93.3 5e-13 seq50 89.7 6e-12 seq32 86.0 8e-11 >seq57 Length=13121071 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||| | |||||| | || Sbjct 12949084 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 12949025 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| ||||||| || ||||||| || | | Sbjct 12949024 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCAAAGA 12948965 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 12948964 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 12948905 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||| ||||| Sbjct 12948904 GCACCTGCTTGAGCACTTTGTA 12948883 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||| | |||||| | || Sbjct 12954353 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 12954412 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| ||||||| || ||||||| || | | Sbjct 12954413 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCAAAGA 12954472 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 12954473 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 12954532 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||| ||||| Sbjct 12954533 GCACCTGCTTGAGCACTTTGTA 12954554 >seq37 Length=20616129 Score = 167 bits (184), Expect = 3e-35 Identities = 158/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 19587779 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 19587838 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| ||||||| |||| | Sbjct 19587839 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGA 19587898 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 19587899 TGTCATTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 19587958 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 19587959 GCACCTGCTTGAGCACCTTGTA 19587980 Score = 167 bits (184), Expect = 3e-35 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 20392960 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 20392901 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| ||||||| |||| | Sbjct 20392900 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGA 20392841 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 20392840 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 20392781 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||||||||||||||| | | || |||||| Sbjct 20392780 GCACCTGCTTGAGCACCTTGTACACGTACACCGAGTA 20392744 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||| || ||||||||||| || | || Sbjct 19454153 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACCGCCGTCTGGATCTCCCGGGACGTGA 19454212 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| ||||||| |||| | Sbjct 19454213 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGA 19454272 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| |||||||| |||||||| Sbjct 19454273 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 19454332 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 19454333 GCACCTGCTTGAGCACCTTGTA 19454354 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||| || ||||||||||| || | || Sbjct 19618184 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCGGGATGTGA 19618125 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 19618124 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 19618065 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 19618064 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 19618005 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 19618004 GCACCTGCTTGAGCACCTTGTA 19617983 Score = 161 bits (178), Expect = 1e-33 Identities = 166/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||| || ||||||||||| || | || Sbjct 19629434 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCGGGACGTGA 19629375 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 19629374 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 19629315 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 19629314 TGTCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 19629255 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||||||||||||||| | | || |||||| Sbjct 19629254 GCACCTGCTTGAGCACCTTGTACACGTACACCGAGTA 19629218 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 19981622 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 19981681 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| ||||||| |||| | Sbjct 19981682 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGA 19981741 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 19981742 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 19981801 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 19981802 GCACCTGCTTGAGCACCTTGTA 19981823 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 20372781 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 20372840 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| ||||||| |||| | Sbjct 20372841 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGA 20372900 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 20372901 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 20372960 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 20372961 GCACCTGCTTGAGCACCTTGTA 20372982 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 20378840 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 20378781 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| ||||||| |||| | Sbjct 20378780 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGA 20378721 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 20378720 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 20378661 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 20378660 GCACCTGCTTGAGCACCTTGTA 20378639 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 20407719 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 20407778 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| ||||||| |||| | Sbjct 20407779 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGA 20407838 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 20407839 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 20407898 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 20407899 GCACCTGCTTGAGCACCTTGTA 20407920 Score = 158 bits (174), Expect = 1e-32 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| || | || Sbjct 19519176 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 19519235 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 19519236 TAGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 19519295 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||| ||||||| ||| | |||| |||||||| |||||||| Sbjct 19519296 TGTCGTTCACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 19519355 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 19519356 GCACCTGCTTGAGCACCTTGTA 19519377 Score = 158 bits (174), Expect = 1e-32 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 19552587 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 19552528 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| ||||||| |||| | Sbjct 19552527 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGA 19552468 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 19552467 TGTCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 19552408 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 19552407 GCACCTGCTTGAGCACCTTGTA 19552386 Score = 158 bits (174), Expect = 1e-32 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 19574968 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 19574909 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| ||||||| |||| | Sbjct 19574908 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGA 19574849 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||| ||||||| ||| | |||| |||||||| |||||||| Sbjct 19574848 TGTCGTTCACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 19574789 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 19574788 GCACCTGCTTGAGCACCTTGTA 19574767 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || ||| | |||||||||||| ||||||||||| || | || Sbjct 19992136 GCTTGGCCAACTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 19992195 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| ||||||| |||| | Sbjct 19992196 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGTGAGGCCTCGCCTGCGATGCGCTCGAAGA 19992255 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| |||||||||||||| | ||| | |||| |||||||| |||||||| Sbjct 19992256 TGTCGTTCACAAACGAGTTCATAATGCCCATGGCCTTGGATGAGATGCCGGTGTCGGGGT 19992315 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 19992316 GCACCTGCTTAAGCACCTTGTA 19992337 Score = 132 bits (146), Expect = 6e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| | ||||||||| |||||||||||||| || | || Sbjct 19281710 GCTTGGCCAGTTCCCCGGGCAGCAGCAGGCGCACCGCGGTCTGGATCTCCCGGGACGTGA 19281651 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | || || || | | Sbjct 19281650 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCACCAGCTATCCGTTCAAATA 19281591 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||| || || ||||||| ||| | ||| ||||||||| ||| |||| Sbjct 19281590 TGTCAGTGACGAAAGAATTCATGATGCTCATGGCCTTCGAGGAGATGCCTGTGTCAGGGT 19281531 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| ||||||||||||||| Sbjct 19281530 GCACCTGCTTCAGCACCTTGTAGATG 19281505 Score = 95.1 bits (104), Expect = 1e-13 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 1254410 GCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTT 1254469 || |||||| |||||||| | || ||||||| |||| || |||| |||||||| Sbjct 19587396 GCACTTGTTGTAGTGCGCCTGGCGCGAGGCCTCGCCCGCGATTCGCTCGAAGATGTCGTT 19587337 Query 1254470 GACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1254529 ||| ||||||||||||| ||| | ||| ||||||| ||| ||| ||||||| Sbjct 19587336 GACGAACGAGTTCATGATGCCCATGGCCTTAGACGAGATGCTGGTGTCTGGGAGCACCTG 19587277 Query 1254530 CTTGAGCACCTTGTA 1254544 ||||||||||||||| Sbjct 19587276 CTTGAGCACCTTGTA 19587262 >seq86 Length=7378830 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 7150149 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 7150090 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| || ||| | ||||||| |||| | Sbjct 7150089 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCTTCGCCGGCGATGCGCTCGAAGA 7150030 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 7150029 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 7149970 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 7149969 GGACCTGCTTCAGCACCTTGTA 7149948 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 7199052 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 7198993 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| || ||| | ||||||| |||| | Sbjct 7198992 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCTTCGCCGGCGATGCGCTCGAAGA 7198933 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 7198932 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 7198873 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 7198872 GGACCTGCTTCAGCACCTTGTA 7198851 Score = 89.7 bits (98), Expect = 6e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 7180509 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 7180568 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| ||||||| |||| | Sbjct 7180569 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGA 7180628 Query 1254463 TGTC 1254466 |||| Sbjct 7180629 TGTC 7180632 >seq8 Length=54407132 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || ||||| | || || || || |||||| | |||||||| | |||| ||| || Sbjct 36520670 ACACTTTTTGAACTTATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 36520729 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 ||||||| |||| ||||| ||||||||||| || | || |||||||| || || ||| Sbjct 36520730 ACGTGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGGAAAACC 36520789 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 36520790 TTCAATATCAA 36520800 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || ||||| | || || || || |||||| | |||||||| | |||| ||| || Sbjct 36521256 ACACTTTTTGAACTTATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 36521315 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 ||||||| |||| ||||| ||||||||||| || | || |||||||| || || ||| Sbjct 36521316 ACGTGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGGAAAACC 36521375 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 36521376 TTCAATATCAA 36521386 >seq50 Length=15135249 Score = 89.7 bits (98), Expect = 6e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428 ||||||||||| || ||||| || | | | ||| ||| ||| | |||| | | ||| Sbjct 10607679 AGGCGCACGGCTGTTTGGATGTCTCTGGAGGTGATGGTGGAGCGATGGTTCTGGCGGGCC 10607738 Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487 || |||||||||||| || ||||||| |||| |||||| ||||| || |||| || ||| Sbjct 10607739 AGGCGGCCGGCCTCGCTGGCGATGCGCTCGAACATGTCCTTGACGAAGGAGTCCAGGAC 10607797 >seq32 Length=26233537 Score = 86.0 bits (94), Expect = 8e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| | |||| ||| || ||||||| |||| ||||| Sbjct 25087180 GCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACGTGCAAGACTGTTGCCAAT 25087121 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| || | || |||||||| || || ||||| || ||||| Sbjct 25087120 ATGATCAAGGGGAAAACTCCTGAGGAGATTCGGAAAACCTTCAATATCAA 25087071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105945733315131