Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11- 20] 14,543 sequences; 2,510,587,379 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq91 86.0 1e-11 >seq91 Length=6382753 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| ||||||| | | || || || |||||| | || || |||| | Sbjct 364401 TGCAGATTTTCTTAAAAACCCTTATGGGGAAGACTATTACTCTCGAGGTTGAACCCTCCA 364342 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||||||| || || || ||| ||||| ||||| || ||||| Sbjct 364341 ACACTATAGAAAATGTAAAAGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGATCAGT 364282 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 |||| ||||| ||||| ||||| ||| |||| ||| Sbjct 364281 AAAGTCTCATCTTTGCTGGTAAGCAACTAGAAGAT 364247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786023484775560