Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6788 102 1e-16 >seq6788 Length=68851 Score = 102 bits (112), Expect = 1e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 || ||| | |||||| | | ||||| |||||| || || |||||||| |||||||| Sbjct 50317 CTTTGGTATGCCATCATTGAGTCTCAGACAGAGACGGGCACCCCGTACATGCTCTACAAA 50258 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 ||| || ||||| || |||||||| | || |||| ||||||||| || ||| ||| Sbjct 50257 GATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAGTGCAGCAACCTG 50198 Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322 |||||||| || || |||||| || Sbjct 50197 TGCACGGAGATAGTGGAGTACACC 50174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740421953930680