Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq847 104 2e-17 >seq847 Length=614715 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 21126 TTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTT 21185 |||||||||| ||||| | | ||| ||||||||| ||| || ||| | | | | | Sbjct 61512 TTTAAAAATCTGCATCCAGGGTGAAGACATTATCTGTAGTTTCTGCCATGACTGCAAATC 61571 Query 21186 TTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATT 21245 ||||| ||| ||||||||| || || |||||||| || ||||| ||||| || || Sbjct 61572 GCTGATACTCAGAAACTCTTTTCTCAAAGAAATTTGTTTTCCCTTCTAATGAAATGTTTT 61631 Query 21246 CCATAAAATCAAATGGATTTTC 21267 ||||||||||||| |||||||| Sbjct 61632 CCATAAAATCAAAGGGATTTTC 61653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531443411853320