Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq41 82.4 8e-11 >seq41 Length=2266706 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/132 (75%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 93116 TCGTCTCGTGATATCAA-CTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTT 93174 ||||||| || || || ||||||| || || | || || | ||| || || ||||| Sbjct 1099973 TCGTCTC-TGCTAATAAGCTCATTGGAAAACGTAAGGCCGGGCATCAGCCCCCGCTTCTT 1099915 Query 93175 GAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGC 93234 |||||| ||||| || |||||| ||||| || || || ||||| || |||||||| || Sbjct 1099914 GAGCCAGAATATCGATGCAAAAGAGCCAGAGAAGAAGATTCCTTCTACCGCTGCAAAGGC 1099855 Query 93235 CACAATACGTTC 93246 ||||| ||| || Sbjct 1099854 CACAACACGCTC 1099843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556381948437320