Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq5258 154 3e-32 seq245 154 3e-32 seq806 150 4e-31 seq1743 141 2e-28 seq186 141 2e-28 seq4084 136 9e-27 seq1868 134 3e-26 seq1044 132 1e-25 seq470 125 2e-23 SEQ11613 118 2e-21 SEQ15051 102 2e-16 seq1635 102 2e-16 seq1493 100 7e-16 seq5515 96.9 8e-15 seq3183 95.1 3e-14 seq897 93.3 1e-13 seq230 93.3 1e-13 seq197 93.3 1e-13 seq584 91.5 3e-13 seq274 87.8 4e-12 >seq5258 Length=100039 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||||| ||||| || || || ||||||||||| | ||||||||||| |||||| Sbjct 770 CGGAGTCTCAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 829 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||||||||||| || ||||| || | |||||| || ||| ||||||| Sbjct 830 CGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCT 889 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || ||| | ||||| | | ||| || || | | Sbjct 890 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGC 949 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| ||||| ||||| || || |||||||| || || Sbjct 950 GTGACGGTCTTTCCCGTCAGGGTCTTCACAAAGATCTG 987 >seq245 Length=1203420 Score = 154 bits (170), Expect = 3e-32 Identities = 169/224 (75%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| |||||| |||| | || | |||||| Sbjct 1796 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCT 1855 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| | |||||||||||| || ||||| ||| Sbjct 1856 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATGCCTTCCTTGTCC 1915 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| || | |||||| | | || || ||||| ||||| ||| Sbjct 1916 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTC 1975 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCCTT 199641 || ||||| || || ||||| || ||||| |||||| |||| Sbjct 1976 TTGCCCGTCAGGGTCTTCACGAAGATTTG---CATTTTGACCTT 2016 Score = 113 bits (124), Expect = 1e-19 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 199442 TTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATG 199501 || |||| ||||||||| | || || | ||||||||||||||||| ||||| ||||| Sbjct 1592 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATC 1651 Query 199502 AGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCG 199561 || | ||||||||| || ||| ||||| ||||| ||||| ||||||| || Sbjct 1652 AGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCA 1711 Query 199562 ACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAA 199621 | |||||| | | || || ||||| ||||| ||||| || || || || ||||| || Sbjct 1712 ATGGTGTCACTGGGCTCGACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAG 1771 Query 199622 ATTTG 199626 || || Sbjct 1772 ATCTG 1776 Score = 109 bits (120), Expect = 1e-18 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| |||||| |||| | || | |||||| Sbjct 1235 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCT 1294 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| | ||||||||| || ||| ||||| ||| Sbjct 1295 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCC 1354 Query 199538 TGAATCTT 199545 || ||||| Sbjct 1355 TGGATCTT 1362 >seq806 Length=630265 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||||| ||||| || || || |||||||| || | ||||||||||| |||||| Sbjct 94752 CGGAGTCTCAACACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTA 94811 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||||||||||| || ||||| || | |||||| || ||| ||||||| Sbjct 94812 CGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCT 94871 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || ||| | ||||||| | ||| | | | | Sbjct 94872 TCCTTATCCTGGATCTTGGCCTTAACATTTTCTATAGTGTCTGAGGGTTCAGCCTTGAGC 94931 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| ||||| ||||| || || ||||||||||| || Sbjct 94932 ATGATGGTCTTCCCCGTAAGGGTCTTCACAAAAATCTG 94969 >seq1743 Length=339712 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||||| ||||| || || || ||||||||||| | ||||||||||| |||||| Sbjct 2363 CGGAGTCTCAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 2304 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||| ||||||||||| || ||||| || | |||||| || ||| ||||||| Sbjct 2303 TGGCCATCTTCTAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCT 2244 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| | ||| | ||||| | | ||| || || | | Sbjct 2243 TCCTTATCCTGGATCTTGGCCTTTATATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGC 2184 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| | || || || ||||||||||| || Sbjct 2183 GTGATGGTCTTCCTGGTCAGGGTCTTCACAAAAATCTG 2146 >seq186 Length=1368741 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||||| ||||| || || | |||||||| || | ||||||||||| |||||| Sbjct 837447 CGGAGTCTCAACACAAGATGAAGGGAGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTA 837388 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||||||||| | || |||| || | |||||| || ||| ||||||| Sbjct 837387 CGGCCATCTTCCAGCTGCTTTTCAGCAGAGATCAGTCTCTGCTGATCAGGAGGAATTCCT 837328 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || ||| | ||||| | | ||| | || | | Sbjct 837327 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGATTCAGCCTCGAGC 837268 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || ||||||||||| || Sbjct 837267 GTGATGGTCTTCCCCGTAAGGGTCTTCACAAAAATCTG 837230 >seq4084 Length=139134 Score = 136 bits (150), Expect = 9e-27 Identities = 164/223 (74%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||||| ||||| || || | |||||||| || | ||||||||||| |||||| Sbjct 21893 CGGAGTCTCAACACAAGATGAAGGGAGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTA 21952 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||||||||||| || |||| || | |||||| || ||| |||||| Sbjct 21953 CGGCCATCTTCCAGCTGCTTTCCAGCAGAGATCAGTCTCTGCTGATCAGGAGGCATTCCT 22012 Query 199529 TCTCG-----CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACAT 199583 ||| | ||||| ||||| ||| || ||| | ||||| | | ||| || | Sbjct 22013 TCTGGATCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCT 22072 Query 199584 CCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | | |||||| ||||| ||| | || || ||||||||||| || Sbjct 22073 CGAGCGTGATGGTCTTCCCCTTAAGGGTCTTCACAAAAATCTG 22115 >seq1868 Length=317776 Score = 134 bits (148), Expect = 3e-26 Identities = 162/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| ||||| || | | || || ||||| | ||||||||||| |||||| | Sbjct 104810 AGTCTCAACACAAGATGAGGGATGGATTCGTTTTGAATGTTGTAGTCAGACAAAGTACGG 104869 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||||||||| || || ||||| || | |||||| || ||| |||||||| Sbjct 104870 CCATCTTCCAGCTGCTTCCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTAC 104929 Query 199532 CGCTCCTGAATCTT-TTG--CTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||||| ||||| ||| ||| || ||| | || |||| | ||| || || | | Sbjct 104930 TTATCCTGGATCTTGTTGGCCTTTACATTTTCTATAGTCTCTGAGGGTTCAACCTCGAGC 104989 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || ||||||||||| || Sbjct 104990 GTGATGGTCTTCCCCGTAAGGGTCTTCACAAAAATATG 105027 >seq1044 Length=525964 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||||| ||||| || || || ||||||||||| | ||||||||||| |||||| Sbjct 400044 CGGAGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 399985 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || || ||||| || | |||||| || ||| ||| ||| Sbjct 399984 CGGCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATCCCT 399925 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || | ||| ||||| ||| || ||| | ||||| | ||| | | | Sbjct 399924 TCCTTATTCTGGATCTTGGCCTTTACATTTTCTATTGTGTCCCAGGGTTCAGCCTTGAGT 399865 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || |||||||||||||| || Sbjct 399864 GTGATGGTCTTCCCTGTAAGGGTTTTCACAAAAATCTG 399827 >seq470 Length=855345 Score = 125 bits (138), Expect = 2e-23 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| ||||| || || || |||||| |||| | ||||||||||| |||||| | Sbjct 695601 GAAGTCTCAACACAAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAGACAAAGTAC 695660 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 ||||||||||||||||| || | ||||| || | |||||| || ||| |||||||| Sbjct 695661 GACCATCTTCCAGCTGCTTACCAGGAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTT 695720 Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589 | ||||||| | | ||| || ||| | ||||| | ||| || || | Sbjct 695721 CCTTATCCTGAAGCCTGGACTTGACATTTTCTATAGTGTCCAACGGTTCAACCTCGGGCT 695780 Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| |||||||| || |||||||| || || Sbjct 695781 CAATGGTCTTCCCCGTGAGGGTCTTCACAAAGATCTG 695817 >SEQ11613 Length=25137 Score = 118 bits (130), Expect = 2e-21 Identities = 131/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 199452 TGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCT 199511 ||||||||| |||||| | |||||||||||||||||||| || ||||| || | ||||| Sbjct 17202 TGTAGTCAGACAAAGTACGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCT 17261 Query 199512 GGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTG 199571 | || ||| ||||||||| ||||| ||||| ||| || ||| | ||||| | Sbjct 17262 GATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCG 17321 Query 199572 TTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||| || || | ||||| ||||| ||||| || || |||||||| || || Sbjct 17322 AGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACAAAGATCTG 17376 >SEQ15051 Length=11622 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||||||| ||||| || || || |||| | |||| | ||||||||||| |||||| | Sbjct 5700 AAGTCTCAACACAAGATGAAGGGTGGACTTCCTTTGAATGTTGTAGTCAGACAAAGTACG 5641 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 | || |||||||||||| || || || | || | |||||| || ||| ||||||||| Sbjct 5640 GCGATATTCCAGCTGCTTACCAGCAAAAAACAGCCCCTGCTGATCAGGAGGAATTCCTTC 5581 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 |||| ||||| ||| ||| ||| | | |||||| | ||| || || | || Sbjct 5580 CTTATCCTTGATCTTAACCTTTACGTTTTCTATGATGTCTGAGGGTTCAACCTCGAGTGT 5521 Query 199591 GATCGTCTT 199599 ||| |||| Sbjct 5520 GATGATCTT 5512 >seq1635 Length=358653 Score = 102 bits (112), Expect = 2e-16 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| ||||| || || | ||||||||||| | | ||||||||| |||||| | Sbjct 132308 AGTCTCAACACAAGATGAAGGGAGGACTCCTTTTGAATGCTGTAGTCAGACAAAGTACGG 132249 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATT 199525 |||||||||||||||||||| || ||||| || | |||||| || ||| |||| Sbjct 132248 CCATCTTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATT 132195 >seq1493 Length=385146 Score = 100 bits (110), Expect = 7e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| ||| | || || || ||||||||| | | ||| ||||||| |||||| Sbjct 338954 CGAAGTCTCAACACAGGTTGAAGGGTGGACTCCTTTAGAATGTTATAGTCAGACAAAGTA 338895 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||||||||||||| || || | |||||| | |||| | || ||| ||||| | Sbjct 338894 TGTCCATCTTCCAGCTGCTTACCAGCAAGGATGAGCCTCTGCCGATCAGGAGGAATTCTT 338835 Query 199529 TCTCGCTCCTGAATC 199543 || ||||| ||| Sbjct 338834 TCCTTATCCTGGATC 338820 >seq5515 Length=93227 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480 ||||| ||||| || | || ||||| | |||||| |||| ||||| ||||||||| Sbjct 75116 ACAAGATGGAGGGTGGGTTCTTTTTGAATGTTGTATTCAGACAAAGCATGGCCATCTTCC 75057 Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540 |||||||| || || ||| | || | |||||| | ||| ||||||||| | ||| Sbjct 75056 AGCTGCTTACCAGCAAAGGTCAGCCTCTGCTGAGCAGGACGAATTCCTTCCTTATTCTGG 74997 Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600 | ||| ||| || ||| | ||||| | ||| || || | ||||| ||||| Sbjct 74996 AGCTTGGCCTTTACATTTTCTATTGTGTCCAAGGGTTCAACCTCGAGTGTGATGGTCTTC 74937 Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||||||||| || Sbjct 74936 CCAGTAAGGGTCTTCACAAAAATCTG 74911 >seq3183 Length=187118 Score = 95.1 bits (104), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||| |||||| ||||| || || || ||||||||||| | ||||||||||| |||||| Sbjct 152409 CGAGGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 152468 Query 199469 CTTCCATCTTCCAGCTGCT----TTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAAT 199524 | |||| ||| ||||| || || ||||| || |||||| || ||| |||| Sbjct 152469 CGGCCATTTTCTCTCTGCTAACCAACCAGCAAAGATCAGTGTCTGCTGATCAGGAGAAAT 152528 Query 199525 TCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATC 199584 |||||| ||||| |||| ||| || ||| ||||||| || ||| || || Sbjct 152529 TCCTTCCTTATCCTGGATCTCGGCCTTTAC-ATTTCTTTAGTGTCTGGTG-TTCAACCTC 152586 Query 199585 CAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | | ||| ||||| || | || || |||||||||| || Sbjct 152587 GAGCATGAGGGTCTTCCCTGAAAGGGTCATCACAAAAATCTG 152628 >seq897 Length=590920 Score = 93.3 bits (102), Expect = 1e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 ||||||| | ||||||||||| |||||| | |||||||||||||||||||| || |||| Sbjct 207908 CCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCTTCCAGCTGCTTTCCAGCAAAGA 207967 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || | |||||| || ||| ||||||| Sbjct 207968 TCAGTCTCTGCTGATCAGGAGGAATTCCT 207996 >seq230 Length=1244281 Score = 93.3 bits (102), Expect = 1e-13 Identities = 103/135 (76%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||| ||| ||||| ||||| || || ||||| || | ||||||||||| |||||| | Sbjct 668190 AAGT-TCAACACAAGATGGAGGGTGGAGTCCTTCTGAAAGTTGTAGTCAGACAAAGTACG 668248 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||||||||||||||| || | |||| | || |||||| | ||| ||||||||| Sbjct 668249 GCCATCTTCCAGCTGCTTCCCAGGGAAGGTCAG--TCTGCTGAGCAGGAGGAATTCCTTC 668306 Query 199531 TCGCTCCTGAATCTT 199545 ||||| ||||| Sbjct 668307 CTTATCCTGGATCTT 668321 >seq197 Length=1344895 Score = 93.3 bits (102), Expect = 1e-13 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| ||||| || || || ||||||||||| | ||| |||||| ||||| Sbjct 265380 GAAGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTACAGTCAGACAAAGCAT 265321 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 ||||||| ||||||||| || || ||||| || | |||||| | ||| |||||||| Sbjct 265320 GGCCATCTTGCAGCTGCTTACCAGCAAAGATCAGTCTCTGCTGATGAGGAGGAATTCCTT 265261 Query 199530 C 199530 | Sbjct 265260 C 265260 >seq584 Length=770825 Score = 91.5 bits (100), Expect = 3e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 199442 TTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATG 199501 || |||| ||||||||| | || || | ||||||||||||||||| || || ||||| Sbjct 448349 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCCGCAAAGATC 448408 Query 199502 AGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCG 199561 || | ||||||||| || || ||||| ||||| |||||| ||| || || Sbjct 448409 AGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTCTCA 448468 Query 199562 ACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAA 199621 | |||||| | | || || || | ||||| || ||||| || | |||||||| || Sbjct 448469 ATGGTGTCACTGGGCTCGACCTCTAGGGTGATGGTTTTACCAGTTAAGGTTTTCACGAAG 448528 Query 199622 ATTTG 199626 || || Sbjct 448529 ATCTG 448533 >seq274 Length=1140931 Score = 87.8 bits (96), Expect = 4e-12 Identities = 76/93 (82%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 199412 AGTCTC-AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||||| | ||||| || || || ||||||||||| | ||||||||||| |||||| | Sbjct 766816 AGTCTCCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACG 766757 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAG 199503 |||||||||||||||||||| || |||| || Sbjct 766756 GCCATCTTCCAGCTGCTTTCCAGCAGAGATCAG 766724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177882486344131