Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq5258 134 1e-26 seq1743 116 3e-21 >seq5258 Length=100039 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || | |||||||||||| || ||||| || ||||| || | | ||| | | |||| Sbjct 779 AACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCT 838 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 |||| ||||| || ||||| |||| | ||| ||||| || ||||| ||||| ||||| Sbjct 839 TCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCC 898 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || || |||||| |||||| |||||| || | ||| || || || ||||| || Sbjct 899 TGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGACGGTC 958 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | || || ||||| |||||||| Sbjct 959 TTTCCCGTCAGGGTCTTCACAAAGATCTGCAT 990 >seq1743 Length=339712 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || | |||||||||||| || ||||| || ||||| || | | ||| | |||| Sbjct 2354 AACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGGCCATCT 2295 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | ||||| || ||||| |||| | ||| ||||| || ||||| ||||| ||||| Sbjct 2294 TCTAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCC 2235 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || || |||| | |||||| |||||| || | ||| || || || |||| || Sbjct 2234 TGGATCTTGGCCTTTATATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTC 2175 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | || || ||||| |||||||| Sbjct 2174 TTCCTGGTCAGGGTCTTCACAAAAATCTGCAT 2143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395946154369101