Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq847 93.3 8e-14 seq41 91.5 3e-13 >seq847 Length=614715 Score = 93.3 bits (102), Expect = 8e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942 |||| |||||||||||||| || || || || ||| || |||||||| || || |||| Sbjct 68649 TGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCTGGATCGTTTGCTGCTATATTCT 68590 Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002 |||| ||| ||| || |||||| || || |||||| || ||||| |||||||||| Sbjct 68589 GGCTAAAGAAGAGAGGCCTCATGCCTGGACTTACCTTTTCAAATGAGCTGATCAGCAGGG 68530 Query 26003 ACGA 26006 | || Sbjct 68529 ATGA 68526 >seq41 Length=2266706 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| | || |||||||| || || || || ||||| ||| || || ||||| Sbjct 1099840 GGAGAGCGTGTTGTGGCCTTTGCAGCGGTAGAAGGAATCTTCTTCTCTGGCTCTTTTGCA 1099899 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCT 25991 | || |||||||||||| || |||| |||||||| || ||| |||||||| ||||| Sbjct 1099900 TCGATATTCTGGCTCAAGAAGCGGGGGCTGATGCCCGGCCT-TACGTTTTCCAATGAGCT 1099958 Query 25992 CATCAGCAGGGACGAGG 26008 || ||||| ||||||| Sbjct 1099959 TATTAGCAGAGACGAGG 1099975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928046074745920