Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq4844 165 1e-35 >seq4844 Length=112033 Score = 165 bits (182), Expect = 1e-35 Identities = 222/309 (72%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 153702 AGTTGAAGTGGTAACACAGGATGTAAATTCATCACTTCGATCGCCCGCGTCCCTCAGATG 153761 ||| ||||||||||| ||||| | || | || | | | || ||| | |||| Sbjct 91155 AGTGGAAGTGGTAACCCAGGACGAAAGAAAGCCGCTCCACACATCTGCATCCTTACGATG 91096 Query 153762 CTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAAAAGAAGAAAGCTGTAGG 153821 || ||||||| | || ||||| || ||||| || ||||| ||||||||||| || | Sbjct 91095 TTCTCTGAAAACATCTCAGGAACCCTTGATTGTGACATGGCAGAAGAAGAAAGCCGTGAG 91036 Query 153822 TCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTGCTTCAGCCCACATATAA 153881 ||||| || ||| ||| || |||||| |||| || || ||| | ||||| | |||| Sbjct 91035 CCCAGAGAACATGATCACTTACAGCAAAACCCATGGGGTTGTGGTCCAGCCTGCCTATAG 90976 Query 153882 AGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGTATAACGTTTTGGAATGC 153941 ||| ||| | || || || || | || || | |||| || || || || ||||| | Sbjct 90975 AGACAGAGTAAACATTACTGAGCTGGGACTCTGGAACACGAGCATCACCTTCTGGAACAC 90916 Query 153942 AACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATGTTCGGTTCTGGTAAGGT 154001 ||| |||||||||| ||||| || |||||||| || |||| || |||||||| ||||| Sbjct 90915 CACAGTGGATGATGAGGGCTGCTACATGTGTCTCTTCAATACCTTTGGTTCTGGGAAGGT 90856 Query 154002 ATCGGGAAC 154010 |||||||| Sbjct 90855 CTCGGGAAC 90847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 648740859501680