Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq584 87.8 3e-12 >seq584 Length=770825 Score = 87.8 bits (96), Expect = 3e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| || || || ||||| || | ||||| |||||||| || || ||||| || Sbjct 448382 TCTTCCAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTG 448441 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || || || || ||||| || || || | || || ||||| || ||| Sbjct 448442 TCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCTAGGGTGATG 448501 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAAAAA 172082 |||||||||||||| ||||| | ||| ||||||||| | | |||||| Sbjct 448502 GTTTTACCAGTTAAGGTTTTCACGAAGATCTGCATTGTCTGTTAAAAA 448549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904357662239400