Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq3821 96.9 3e-15 >seq3821 Length=151595 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 111781 GTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCT 111840 ||||||||||| |||||||| ||||| || || || || || || || ||||| ||| Sbjct 45560 GTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATATTGAAGGGCACGCCT 45501 Query 111841 AGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAA 111900 || |||||||| || || || || || ||||| || || || | | |||||| Sbjct 45500 AGACCCATATCACCTGACCTCTGGTAAAGCTGGCAAGACAGCTCTCCATTCACCACATAG 45441 Query 111901 AATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || ||||| || ||||||| ||||||| ||||||| Sbjct 45440 AACTGACAGAGGGCATGACAGGGAGGCAGTGCCATC 45405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391616987052259