Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq245 91.5 1e-13 >seq245 Length=1203420 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || ||||| | ||| || || | || || ||||| ||||| ||||| Sbjct 1816 CTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 1875 Query 39153 TATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCG 39211 || || | ||||||||| |||||| | || || |||||| ||| || || | Sbjct 1876 GATGAGCCTCTGCTGGTCCGGTGGG-ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGT 1934 Query 39212 TCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 || | | || || || | |||||| |||| ||||| | || |||||||| || || | Sbjct 1935 TCTCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTCTTCA 1994 Query 39272 CAAAGATTTGCATCTTTAC 39290 | ||||||||||| || || Sbjct 1995 CGAAGATTTGCATTTTGAC 2013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429185462660009