Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq35 84.2 2e-11 >seq35 Length=17774785 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 ||||| || || || ||||||||| | || || ||||| ||||| || |||||||||||| Sbjct 13464802 GCCTTCGCTGCCGTAGAAGGCGTCTTCTTCTCGGGGTCGTTTGCCGCTATATTCTGGCTG 13464861 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGA 22868 ||||| | ||||||||||| | | || || |||||| | || ||| | ||||| Sbjct 13464862 AAGAAGAGAGGCCTCATGCCAGGACTCACTTTCTCAAACGAGCTCATCAGCAGGGACGA 13464920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356140325130052