Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq44 100 7e-16 >seq44 Length=14409287 Score = 100 bits (110), Expect = 7e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 ||||| ||||| |||||||| || || |||||| || || || |||||||||| Sbjct 13231289 AGCGCCCTGGGGCATTTGCTATTTACCTGGAGCCTTGGCACTTAGACATCTTTGAGTTTC 13231348 Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949 |||| | ||||||||| || || || ||| ||| || || ||||| |||| ||||| Sbjct 13231349 TTGACTTGAAGAAAAACACAGGGAAGGAAGAACAGCGAGCCCGGGATCTCTTCTTTGCAC 13231408 Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 ||||| || | || | || |||||||| |||||| Sbjct 13231409 TTTGGATTCCAGATCTCTTCATGAAGCGAGTGGAG 13231443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302994834000488