Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq95 91.5 2e-13 >seq95 Length=9356868 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920 |||| ||| | || ||||| || | |||||||||||||| || ||||||| ||||| | Sbjct 743923 AGGGTTACTTGGGTTGCCAAACCTTATCAGAAATGATCCAGTTTTACCTGGTAGAAGTGA 743864 Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980 |||| ||||| || ||||| | ||| ||| ||| || ||| | || || | || || | Sbjct 743863 TGCCCCAGGCAGAGAACCACGGCCCAGAAATCAAGGAGCATTTGAACTCCCTAGGAGAGA 743804 Query 9981 ATCTAAAGACCCT 9993 | || |||||||| Sbjct 743803 AGCTGAAGACCCT 743791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552568367903360